EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000019438 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 6242 bases
Position: chrNXFZ01000964.1:57677-63918
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000014716	RRM_1	PF00076.22	1.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000023153	-	345	-	ENSAOCP00000014716	114 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000019438's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000019438's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000019438	-	66	41.772	ENSAOCG00000021499	srsf7b	59	41.772

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000019438	-	98	67.939	ENSG00000124193	SRSF6	92	67.939	Homo_sapiens
ENSAOCG00000019438	-	79	98.889	ENSAPOG00000016635	-	59	94.737	Acanthochromis_polyacanthus
ENSAOCG00000019438	-	77	86.364	ENSACIG00000020091	-	74	93.421	Amphilophus_citrinellus
ENSAOCG00000019438	-	98	67.939	ENSANAG00000024080	SRSF6	92	67.939	Aotus_nancymaae
ENSAOCG00000019438	-	64	91.781	ENSACLG00000024373	-	80	92.105	Astatotilapia_calliptera
ENSAOCG00000019438	-	68	94.805	ENSAMXG00000042692	-	56	94.872	Astyanax_mexicanus
ENSAOCG00000019438	-	98	68.702	ENSBTAG00000008527	SRSF6	92	68.702	Bos_taurus
ENSAOCG00000019438	-	98	67.939	ENSCJAG00000048403	SRSF6	92	67.939	Callithrix_jacchus
ENSAOCG00000019438	-	98	68.702	ENSCAFG00000009289	SRSF6	92	68.702	Canis_familiaris
ENSAOCG00000019438	-	98	68.702	ENSCAFG00020013559	SRSF6	92	68.702	Canis_lupus_dingo
ENSAOCG00000019438	-	98	68.702	ENSCHIG00000015890	-	92	68.702	Capra_hircus
ENSAOCG00000019438	-	98	67.939	ENSCPOG00000011761	SRSF6	92	67.939	Cavia_porcellus
ENSAOCG00000019438	-	98	67.939	ENSCCAG00000026018	-	92	67.939	Cebus_capucinus
ENSAOCG00000019438	-	98	67.939	ENSCATG00000030794	SRSF6	92	67.939	Cercocebus_atys
ENSAOCG00000019438	-	98	67.939	ENSCLAG00000010247	SRSF6	92	67.939	Chinchilla_lanigera
ENSAOCG00000019438	-	98	67.939	ENSCGRG00001022339	Srsf6	92	67.939	Cricetulus_griseus_chok1gshd
ENSAOCG00000019438	-	68	97.436	ENSCSEG00000019778	SRSF6	59	97.436	Cynoglossus_semilaevis
ENSAOCG00000019438	-	73	95.181	ENSCVAG00000001863	SRSF6	82	95.181	Cyprinodon_variegatus
ENSAOCG00000019438	-	68	93.506	ENSDARG00000016783	srsf6b	82	93.590	Danio_rerio
ENSAOCG00000019438	-	98	67.939	ENSDORG00000028378	Srsf6	92	67.939	Dipodomys_ordii
ENSAOCG00000019438	-	73	92.771	ENSELUG00000013506	SRSF6	70	92.308	Esox_lucius
ENSAOCG00000019438	-	85	82.474	ENSELUG00000024182	SRSF6	76	93.590	Esox_lucius
ENSAOCG00000019438	-	98	68.548	ENSGALG00000000990	SRSF6	58	93.590	Gallus_gallus
ENSAOCG00000019438	-	98	67.939	ENSGGOG00000009808	SRSF6	92	67.939	Gorilla_gorilla
ENSAOCG00000019438	-	98	67.939	ENSHGLG00000007348	SRSF6	92	67.939	Heterocephalus_glaber_female
ENSAOCG00000019438	-	98	67.939	ENSSTOG00000010866	SRSF6	92	67.939	Ictidomys_tridecemlineatus
ENSAOCG00000019438	-	98	67.939	ENSMFAG00000036925	SRSF6	92	67.939	Macaca_fascicularis
ENSAOCG00000019438	-	98	67.939	ENSMMUG00000006742	SRSF6	92	67.939	Macaca_mulatta
ENSAOCG00000019438	-	98	67.176	ENSMNEG00000027392	-	92	67.176	Macaca_nemestrina
ENSAOCG00000019438	-	72	91.463	ENSMAMG00000023477	-	82	93.421	Mastacembelus_armatus
ENSAOCG00000019438	-	98	67.939	ENSMAUG00000019086	-	92	67.939	Mesocricetus_auratus
ENSAOCG00000019438	-	98	67.939	ENSMICG00000008537	SRSF6	92	67.939	Microcebus_murinus
ENSAOCG00000019438	-	82	93.548	ENSMMOG00000015241	-	87	93.548	Mola_mola
ENSAOCG00000019438	-	98	67.939	MGP_CAROLIEiJ_G0024606	Srsf6	92	67.939	Mus_caroli
ENSAOCG00000019438	-	98	67.939	ENSMUSG00000016921	Srsf6	92	67.939	Mus_musculus
ENSAOCG00000019438	-	98	67.939	MGP_PahariEiJ_G0026050	Srsf6	92	67.939	Mus_pahari
ENSAOCG00000019438	-	98	67.939	MGP_SPRETEiJ_G0025528	Srsf6	92	67.939	Mus_spretus
ENSAOCG00000019438	-	98	67.939	ENSNGAG00000017560	Srsf6	92	67.939	Nannospalax_galili
ENSAOCG00000019438	-	98	67.939	ENSNLEG00000006524	SRSF6	92	67.939	Nomascus_leucogenys
ENSAOCG00000019438	-	98	67.939	ENSODEG00000016510	-	92	67.939	Octodon_degus
ENSAOCG00000019438	-	98	67.939	ENSPTRG00000044686	-	92	67.939	Pan_troglodytes
ENSAOCG00000019438	-	98	67.939	ENSPANG00000035224	SRSF6	92	67.939	Papio_anubis
ENSAOCG00000019438	-	95	60.177	ENSPKIG00000015703	-	57	79.167	Paramormyrops_kingsleyae
ENSAOCG00000019438	-	93	82.075	ENSPKIG00000018463	-	77	94.872	Paramormyrops_kingsleyae
ENSAOCG00000019438	-	68	96.154	ENSPKIG00000015603	-	56	96.154	Paramormyrops_kingsleyae
ENSAOCG00000019438	-	69	57.143	ENSPEMG00000022405	-	75	57.143	Peromyscus_maniculatus_bairdii
ENSAOCG00000019438	-	98	67.939	ENSPCIG00000003820	SRSF6	92	67.939	Phascolarctos_cinereus
ENSAOCG00000019438	-	73	95.181	ENSPLAG00000009243	srsf6a	52	95.181	Poecilia_latipinna
ENSAOCG00000019438	-	73	95.181	ENSPREG00000001040	srsf6a	56	95.181	Poecilia_reticulata
ENSAOCG00000019438	-	98	67.939	ENSPCOG00000026364	SRSF6	92	67.939	Propithecus_coquereli
ENSAOCG00000019438	-	98	71.074	ENSPNAG00000023179	-	60	94.872	Pygocentrus_nattereri
ENSAOCG00000019438	-	98	70.588	ENSRBIG00000041414	SRSF6	92	71.429	Rhinopithecus_bieti
ENSAOCG00000019438	-	98	67.939	ENSRROG00000029989	SRSF6	92	67.939	Rhinopithecus_roxellana
ENSAOCG00000019438	-	98	67.939	ENSSBOG00000033708	-	92	67.939	Saimiri_boliviensis_boliviensis
ENSAOCG00000019438	-	70	93.750	ENSSMAG00000014861	-	58	96.154	Scophthalmus_maximus
ENSAOCG00000019438	-	72	91.463	ENSSDUG00000011036	-	83	93.421	Seriola_dumerili
ENSAOCG00000019438	-	72	91.463	ENSSLDG00000014858	-	83	93.421	Seriola_lalandi_dorsalis
ENSAOCG00000019438	-	98	68.548	ENSSPUG00000004967	SRSF6	58	93.590	Sphenodon_punctatus
ENSAOCG00000019438	-	72	89.024	ENSSPAG00000021913	-	79	92.105	Stegastes_partitus
ENSAOCG00000019438	-	70	96.250	ENSTRUG00000021397	-	87	96.250	Takifugu_rubripes
ENSAOCG00000019438	-	98	68.702	ENSUAMG00000003559	SRSF6	92	68.702	Ursus_americanus
ENSAOCG00000019438	-	98	48.092	ENSVVUG00000019276	-	91	48.092	Vulpes_vulpes