EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000019579 (Gene tree)
Gene ID: 111582807
Gene Symbol: rbm12
Alias: zgc:193560|zgc:193570
Full Name: RNA binding motif protein 12
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 2703 bases
Position: chrNXFZ01003965.1:31430-34132
Accession: 111582807
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000029336	RRM_1	PF00076.22	6.2e-33	1	4
ENSAOCP00000029336	RRM_1	PF00076.22	6.2e-33	2	4
ENSAOCP00000029336	RRM_1	PF00076.22	6.2e-33	3	4
ENSAOCP00000029336	RRM_1	PF00076.22	6.2e-33	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000023342	-	2703	XM_023291659	ENSAOCP00000029336	900 (aa)	XP_023147427	UPI000C3058A6

Gene Model

Click here to download ENSAOCG00000019579's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000019579's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000019579	rbm12	56	71.591	ENSAOCG00000024270	rbm12b	87	71.591

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000019579	rbm12	100	89.789	ENSACIG00000011053	rbm12	100	89.579	Amphilophus_citrinellus
ENSAOCG00000019579	rbm12	100	60.363	ENSDARG00000100636	rbm12	100	59.445	Danio_rerio
ENSAOCG00000019579	rbm12	100	87.154	ENSGACG00000004202	rbm12	98	87.375	Gasterosteus_aculeatus
ENSAOCG00000019579	rbm12	100	61.457	ENSIPUG00000014491	rbm12	100	61.270	Ictalurus_punctatus
ENSAOCG00000019579	rbm12	52	68.293	ENSJJAG00000009879	-	82	55.200	Jaculus_jaculus
ENSAOCG00000019579	rbm12	71	57.839	ENSLOCG00000018363	rbm12	100	59.362	Lepisosteus_oculatus
ENSAOCG00000019579	rbm12	64	85.075	ENSMAMG00000001497	rbm12	94	85.075	Mastacembelus_armatus
ENSAOCG00000019579	rbm12	100	87.043	ENSMMOG00000013495	rbm12	100	86.504	Mola_mola
ENSAOCG00000019579	rbm12	58	97.260	ENSMALG00000022679	rbm12	100	97.260	Monopterus_albus
ENSAOCG00000019579	rbm12	100	81.257	ENSOMEG00000008238	rbm12	100	81.147	Oryzias_melastigma
ENSAOCG00000019579	rbm12	100	45.745	ENSXETG00000033541	RBM12	100	44.674	Xenopus_tropicalis
ENSAOCG00000019579	rbm12	99	81.858	ENSXCOG00000014073	rbm12	99	81.858	Xiphophorus_couchianus