EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000019801 (Gene tree)
Gene ID: 111575055
Gene Symbol: sf3b4
Alias: chunp6902|fb36a04|wu:fb36a04
Full Name: splicing factor 3b subunit 4
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 8020 bases
Position: chrNXFZ01003021.1:87348-95367
Accession: 111575055
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000015082	RRM_1	PF00076.22	2.9e-39	1	2
ENSAOCP00000015082	RRM_1	PF00076.22	2.9e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000031721	-	1558	XM_023279963	ENSAOCP00000015082	400 (aa)	XP_023135731	UPI000C30DE83

Gene Model

Click here to download ENSAOCG00000019801's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000019801's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000019801	sf3b4	77	82.445	ENSG00000143368	SF3B4	89	100.000	Homo_sapiens
ENSAOCG00000019801	sf3b4	100	99.250	ENSAPOG00000017647	sf3b4	100	99.250	Acanthochromis_polyacanthus
ENSAOCG00000019801	sf3b4	77	80.564	ENSAMEG00000010073	SF3B4	57	96.667	Ailuropoda_melanoleuca
ENSAOCG00000019801	sf3b4	70	83.986	ENSACIG00000018455	sf3b4	67	98.673	Amphilophus_citrinellus
ENSAOCG00000019801	sf3b4	100	100.000	ENSAPEG00000010365	sf3b4	100	100.000	Amphiprion_percula
ENSAOCG00000019801	sf3b4	100	96.278	ENSATEG00000012844	sf3b4	100	96.278	Anabas_testudineus
ENSAOCG00000019801	sf3b4	54	100.000	ENSACAG00000010019	SF3B4	54	99.115	Anolis_carolinensis
ENSAOCG00000019801	sf3b4	77	82.445	ENSANAG00000031025	SF3B4	57	96.667	Aotus_nancymaae
ENSAOCG00000019801	sf3b4	73	94.483	ENSACLG00000014260	sf3b4	72	94.483	Astatotilapia_calliptera
ENSAOCG00000019801	sf3b4	60	96.667	ENSAMXG00000008282	sf3b4	60	96.667	Astyanax_mexicanus
ENSAOCG00000019801	sf3b4	77	80.564	ENSBTAG00000012495	SF3B4	57	96.667	Bos_taurus
ENSAOCG00000019801	sf3b4	70	77.133	ENSBTAG00000012793	-	53	94.860	Bos_taurus
ENSAOCG00000019801	sf3b4	64	73.228	WBGene00004723	sap-49	54	81.991	Caenorhabditis_elegans
ENSAOCG00000019801	sf3b4	77	80.251	ENSCAFG00000011617	SF3B4	57	96.667	Canis_familiaris
ENSAOCG00000019801	sf3b4	77	80.251	ENSCAFG00020019775	SF3B4	57	96.667	Canis_lupus_dingo
ENSAOCG00000019801	sf3b4	77	80.564	ENSCHIG00000025663	-	57	96.667	Capra_hircus
ENSAOCG00000019801	sf3b4	77	82.445	ENSTSYG00000009295	SF3B4	57	96.667	Carlito_syrichta
ENSAOCG00000019801	sf3b4	77	80.251	ENSCPOG00000008267	SF3B4	57	96.667	Cavia_porcellus
ENSAOCG00000019801	sf3b4	77	82.445	ENSCATG00000033114	SF3B4	57	96.667	Cercocebus_atys
ENSAOCG00000019801	sf3b4	77	80.251	ENSCLAG00000015851	SF3B4	57	96.667	Chinchilla_lanigera
ENSAOCG00000019801	sf3b4	77	82.445	ENSCSAG00000018129	SF3B4	57	96.667	Chlorocebus_sabaeus
ENSAOCG00000019801	sf3b4	54	100.000	ENSCPBG00000008041	SF3B4	54	98.678	Chrysemys_picta_bellii
ENSAOCG00000019801	sf3b4	57	87.665	ENSCING00000002337	-	57	90.521	Ciona_intestinalis
ENSAOCG00000019801	sf3b4	52	91.429	ENSCSAVG00000007809	-	88	89.697	Ciona_savignyi
ENSAOCG00000019801	sf3b4	77	82.445	ENSCANG00000035579	SF3B4	57	96.667	Colobus_angolensis_palliatus
ENSAOCG00000019801	sf3b4	60	96.667	ENSCGRG00001003590	Sf3b4	57	96.667	Cricetulus_griseus_chok1gshd
ENSAOCG00000019801	sf3b4	60	96.667	ENSCGRG00000016914	Sf3b4	57	96.667	Cricetulus_griseus_crigri
ENSAOCG00000019801	sf3b4	67	95.113	ENSCVAG00000005536	sf3b4	54	100.000	Cyprinodon_variegatus
ENSAOCG00000019801	sf3b4	60	97.500	ENSDARG00000018574	sf3b4	60	97.500	Danio_rerio
ENSAOCG00000019801	sf3b4	97	65.075	ENSDNOG00000037231	-	50	87.245	Dasypus_novemcinctus
ENSAOCG00000019801	sf3b4	75	76.206	ENSDNOG00000048908	-	56	91.379	Dasypus_novemcinctus
ENSAOCG00000019801	sf3b4	77	80.564	ENSDORG00000016366	Sf3b4	57	96.667	Dipodomys_ordii
ENSAOCG00000019801	sf3b4	77	71.473	ENSETEG00000008963	SF3B4	50	89.100	Echinops_telfairi
ENSAOCG00000019801	sf3b4	77	80.564	ENSEASG00005001477	SF3B4	57	96.667	Equus_asinus_asinus
ENSAOCG00000019801	sf3b4	77	80.564	ENSECAG00000024737	SF3B4	57	96.667	Equus_caballus
ENSAOCG00000019801	sf3b4	87	92.000	ENSELUG00000012876	sf3b4	60	99.167	Esox_lucius
ENSAOCG00000019801	sf3b4	77	80.564	ENSFCAG00000010106	SF3B4	57	96.667	Felis_catus
ENSAOCG00000019801	sf3b4	77	80.251	ENSFDAG00000009286	SF3B4	57	96.667	Fukomys_damarensis
ENSAOCG00000019801	sf3b4	57	98.690	ENSGMOG00000002519	sf3b4	67	98.678	Gadus_morhua
ENSAOCG00000019801	sf3b4	54	100.000	ENSGALG00000013352	SF3B4	54	99.119	Gallus_gallus
ENSAOCG00000019801	sf3b4	70	95.374	ENSGAFG00000010181	sf3b4	73	95.502	Gambusia_affinis
ENSAOCG00000019801	sf3b4	59	99.576	ENSGACG00000003819	sf3b4	60	99.576	Gasterosteus_aculeatus
ENSAOCG00000019801	sf3b4	77	82.445	ENSGGOG00000004761	SF3B4	57	96.667	Gorilla_gorilla
ENSAOCG00000019801	sf3b4	77	70.288	ENSGGOG00000038845	-	54	89.524	Gorilla_gorilla
ENSAOCG00000019801	sf3b4	73	94.483	ENSHBUG00000002028	sf3b4	72	94.483	Haplochromis_burtoni
ENSAOCG00000019801	sf3b4	77	80.251	ENSHGLG00000012360	SF3B4	57	96.667	Heterocephalus_glaber_female
ENSAOCG00000019801	sf3b4	60	96.667	ENSHGLG00100008533	SF3B4	57	96.667	Heterocephalus_glaber_male
ENSAOCG00000019801	sf3b4	57	97.357	ENSHCOG00000003014	sf3b4	57	97.357	Hippocampus_comes
ENSAOCG00000019801	sf3b4	69	95.290	ENSIPUG00000012242	Sf3b4	60	97.917	Ictalurus_punctatus
ENSAOCG00000019801	sf3b4	77	80.564	ENSSTOG00000000684	-	57	96.667	Ictidomys_tridecemlineatus
ENSAOCG00000019801	sf3b4	76	59.551	ENSJJAG00000022500	Sf3b4	59	71.429	Jaculus_jaculus
ENSAOCG00000019801	sf3b4	58	98.712	ENSLBEG00000026818	sf3b4	57	100.000	Labrus_bergylta
ENSAOCG00000019801	sf3b4	60	95.000	ENSLACG00000004436	SF3B4	66	95.000	Latimeria_chalumnae
ENSAOCG00000019801	sf3b4	58	98.707	ENSLOCG00000009048	sf3b4	54	100.000	Lepisosteus_oculatus
ENSAOCG00000019801	sf3b4	77	80.495	ENSLAFG00000008531	SF3B4	56	96.667	Loxodonta_africana
ENSAOCG00000019801	sf3b4	87	63.842	ENSMFAG00000039067	-	53	79.899	Macaca_fascicularis
ENSAOCG00000019801	sf3b4	77	82.445	ENSMFAG00000042395	SF3B4	57	96.667	Macaca_fascicularis
ENSAOCG00000019801	sf3b4	77	82.445	ENSMMUG00000007256	SF3B4	57	96.667	Macaca_mulatta
ENSAOCG00000019801	sf3b4	87	63.277	ENSMNEG00000031526	-	53	79.500	Macaca_nemestrina
ENSAOCG00000019801	sf3b4	77	82.445	ENSMNEG00000031839	SF3B4	57	96.667	Macaca_nemestrina
ENSAOCG00000019801	sf3b4	77	82.445	ENSMLEG00000038667	SF3B4	57	96.667	Mandrillus_leucophaeus
ENSAOCG00000019801	sf3b4	60	97.917	ENSMAMG00000014692	sf3b4	60	97.917	Mastacembelus_armatus
ENSAOCG00000019801	sf3b4	73	94.483	ENSMZEG00005026741	sf3b4	72	94.483	Maylandia_zebra
ENSAOCG00000019801	sf3b4	54	100.000	ENSMGAG00000000653	SF3B4	55	99.119	Meleagris_gallopavo
ENSAOCG00000019801	sf3b4	60	96.667	ENSMAUG00000015266	Sf3b4	57	96.667	Mesocricetus_auratus
ENSAOCG00000019801	sf3b4	77	80.564	ENSMICG00000044961	SF3B4	57	96.667	Microcebus_murinus
ENSAOCG00000019801	sf3b4	77	80.878	ENSMOCG00000013658	-	57	96.667	Microtus_ochrogaster
ENSAOCG00000019801	sf3b4	92	74.607	ENSMOCG00000014155	-	57	94.372	Microtus_ochrogaster
ENSAOCG00000019801	sf3b4	59	98.729	ENSMMOG00000018032	sf3b4	60	98.729	Mola_mola
ENSAOCG00000019801	sf3b4	77	82.445	ENSMODG00000018767	SF3B4	57	96.667	Monodelphis_domestica
ENSAOCG00000019801	sf3b4	67	95.167	ENSMALG00000006174	sf3b4	60	98.354	Monopterus_albus
ENSAOCG00000019801	sf3b4	60	96.667	MGP_CAROLIEiJ_G0025365	Sf3b4	57	96.667	Mus_caroli
ENSAOCG00000019801	sf3b4	60	96.667	ENSMUSG00000068856	Sf3b4	57	96.667	Mus_musculus
ENSAOCG00000019801	sf3b4	60	96.667	MGP_PahariEiJ_G0026809	Sf3b4	57	96.667	Mus_pahari
ENSAOCG00000019801	sf3b4	60	96.667	MGP_SPRETEiJ_G0026309	Sf3b4	57	96.667	Mus_spretus
ENSAOCG00000019801	sf3b4	77	80.564	ENSMPUG00000005563	SF3B4	57	96.667	Mustela_putorius_furo
ENSAOCG00000019801	sf3b4	77	80.878	ENSMLUG00000010789	SF3B4	57	97.083	Myotis_lucifugus
ENSAOCG00000019801	sf3b4	77	82.132	ENSNGAG00000016337	Sf3b4	57	96.667	Nannospalax_galili
ENSAOCG00000019801	sf3b4	73	94.828	ENSNBRG00000013865	sf3b4	72	94.828	Neolamprologus_brichardi
ENSAOCG00000019801	sf3b4	99	66.339	ENSNLEG00000000537	-	54	90.094	Nomascus_leucogenys
ENSAOCG00000019801	sf3b4	57	93.421	ENSOPRG00000010808	SF3B4	50	95.261	Ochotona_princeps
ENSAOCG00000019801	sf3b4	76	68.454	ENSODEG00000003597	-	59	80.498	Octodon_degus
ENSAOCG00000019801	sf3b4	91	59.043	ENSODEG00000008916	-	55	76.415	Octodon_degus
ENSAOCG00000019801	sf3b4	87	93.642	ENSONIG00000002730	sf3b4	86	93.913	Oreochromis_niloticus
ENSAOCG00000019801	sf3b4	65	72.556	ENSOANG00000004768	-	50	81.776	Ornithorhynchus_anatinus
ENSAOCG00000019801	sf3b4	77	80.564	ENSOCUG00000004614	SF3B4	57	96.667	Oryctolagus_cuniculus
ENSAOCG00000019801	sf3b4	86	90.805	ENSORLG00000003062	sf3b4	58	99.558	Oryzias_latipes
ENSAOCG00000019801	sf3b4	75	91.030	ENSORLG00020000687	sf3b4	57	99.558	Oryzias_latipes_hni
ENSAOCG00000019801	sf3b4	75	91.030	ENSORLG00015010989	sf3b4	57	99.558	Oryzias_latipes_hsok
ENSAOCG00000019801	sf3b4	58	97.845	ENSOMEG00000013694	sf3b4	57	99.558	Oryzias_melastigma
ENSAOCG00000019801	sf3b4	77	80.564	ENSOGAG00000006265	SF3B4	57	96.667	Otolemur_garnettii
ENSAOCG00000019801	sf3b4	77	80.564	ENSOARG00000020718	-	57	96.667	Ovis_aries
ENSAOCG00000019801	sf3b4	71	73.311	ENSOARG00000007368	-	51	83.092	Ovis_aries
ENSAOCG00000019801	sf3b4	77	82.445	ENSPPAG00000040904	SF3B4	57	96.667	Pan_paniscus
ENSAOCG00000019801	sf3b4	77	76.997	ENSPPAG00000030024	-	59	86.667	Pan_paniscus
ENSAOCG00000019801	sf3b4	77	80.564	ENSPPRG00000007384	SF3B4	57	96.667	Panthera_pardus
ENSAOCG00000019801	sf3b4	77	80.564	ENSPTIG00000014530	SF3B4	57	96.667	Panthera_tigris_altaica
ENSAOCG00000019801	sf3b4	77	77.273	ENSPTRG00000049727	-	60	87.083	Pan_troglodytes
ENSAOCG00000019801	sf3b4	77	82.445	ENSPTRG00000001243	SF3B4	57	96.667	Pan_troglodytes
ENSAOCG00000019801	sf3b4	77	82.445	ENSPANG00000005126	SF3B4	57	96.667	Papio_anubis
ENSAOCG00000019801	sf3b4	61	98.354	ENSPKIG00000020669	sf3b4	64	98.354	Paramormyrops_kingsleyae
ENSAOCG00000019801	sf3b4	66	76.806	ENSPSIG00000009565	SF3B4	67	98.370	Pelodiscus_sinensis
ENSAOCG00000019801	sf3b4	60	96.667	ENSPEMG00000017568	Sf3b4	57	96.667	Peromyscus_maniculatus_bairdii
ENSAOCG00000019801	sf3b4	53	95.305	ENSPMAG00000007842	-	50	95.283	Petromyzon_marinus
ENSAOCG00000019801	sf3b4	77	82.445	ENSPCIG00000008765	SF3B4	57	96.667	Phascolarctos_cinereus
ENSAOCG00000019801	sf3b4	70	95.374	ENSPFOG00000005754	sf3b4	73	95.502	Poecilia_formosa
ENSAOCG00000019801	sf3b4	70	95.374	ENSPLAG00000001401	sf3b4	80	95.502	Poecilia_latipinna
ENSAOCG00000019801	sf3b4	70	95.018	ENSPREG00000011076	sf3b4	72	95.156	Poecilia_reticulata
ENSAOCG00000019801	sf3b4	52	96.635	ENSPCAG00000000392	SF3B4	50	96.635	Procavia_capensis
ENSAOCG00000019801	sf3b4	77	80.564	ENSPCOG00000015399	SF3B4	57	96.667	Propithecus_coquereli
ENSAOCG00000019801	sf3b4	77	80.564	ENSPVAG00000014171	SF3B4	57	96.667	Pteropus_vampyrus
ENSAOCG00000019801	sf3b4	73	94.483	ENSPNYG00000012700	sf3b4	72	94.483	Pundamilia_nyererei
ENSAOCG00000019801	sf3b4	60	97.500	ENSPNAG00000000686	sf3b4	61	97.500	Pygocentrus_nattereri
ENSAOCG00000019801	sf3b4	60	96.667	ENSRNOG00000021181	Sf3b4	57	96.667	Rattus_norvegicus
ENSAOCG00000019801	sf3b4	77	82.445	ENSRBIG00000043392	SF3B4	57	96.667	Rhinopithecus_bieti
ENSAOCG00000019801	sf3b4	92	59.791	ENSRROG00000028213	-	51	75.000	Rhinopithecus_roxellana
ENSAOCG00000019801	sf3b4	77	82.445	ENSRROG00000029366	SF3B4	57	96.667	Rhinopithecus_roxellana
ENSAOCG00000019801	sf3b4	77	82.132	ENSSBOG00000012310	-	57	96.250	Saimiri_boliviensis_boliviensis
ENSAOCG00000019801	sf3b4	77	78.997	ENSSHAG00000004043	SF3B4	56	92.083	Sarcophilus_harrisii
ENSAOCG00000019801	sf3b4	61	97.942	ENSSFOG00015008864	sf3b4	60	97.942	Scleropages_formosus
ENSAOCG00000019801	sf3b4	100	97.519	ENSSDUG00000012064	sf3b4	100	97.519	Seriola_dumerili
ENSAOCG00000019801	sf3b4	100	97.270	ENSSLDG00000014226	sf3b4	100	97.270	Seriola_lalandi_dorsalis
ENSAOCG00000019801	sf3b4	100	98.010	ENSSPAG00000019219	sf3b4	100	98.010	Stegastes_partitus
ENSAOCG00000019801	sf3b4	77	80.745	ENSSSCG00000006665	-	57	96.667	Sus_scrofa
ENSAOCG00000019801	sf3b4	59	96.610	ENSTGUG00000004470	SF3B4	89	98.678	Taeniopygia_guttata
ENSAOCG00000019801	sf3b4	80	89.623	ENSTRUG00000004516	sf3b4	59	98.305	Takifugu_rubripes
ENSAOCG00000019801	sf3b4	57	98.690	ENSTNIG00000009156	sf3b4	58	99.119	Tetraodon_nigroviridis
ENSAOCG00000019801	sf3b4	77	80.564	ENSTTRG00000005217	SF3B4	57	96.667	Tursiops_truncatus
ENSAOCG00000019801	sf3b4	77	80.564	ENSUAMG00000022468	SF3B4	57	96.667	Ursus_americanus
ENSAOCG00000019801	sf3b4	60	96.667	ENSUMAG00000003802	SF3B4	57	96.667	Ursus_maritimus
ENSAOCG00000019801	sf3b4	74	79.805	ENSVPAG00000008152	SF3B4	55	96.491	Vicugna_pacos
ENSAOCG00000019801	sf3b4	77	80.251	ENSVVUG00000007732	-	61	96.667	Vulpes_vulpes
ENSAOCG00000019801	sf3b4	76	79.605	ENSXETG00000011038	sf3b4	53	100.000	Xenopus_tropicalis
ENSAOCG00000019801	sf3b4	71	95.406	ENSXCOG00000019895	sf3b4	74	95.502	Xiphophorus_couchianus
ENSAOCG00000019801	sf3b4	70	95.730	ENSXMAG00000003772	sf3b4	74	95.848	Xiphophorus_maculatus