EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAOCG00000019839 (Gene tree)
Gene ID
111575041
Gene Symbol
pabpc1b
Alias
-
Full Name
polyadenylate-binding protein 1
Gene Type
protein_coding
Species
Amphiprion_ocellaris
Status
putative
Strand
Plus strand
Length
9734 bases
Position
chrNXFZ01003021.1:54070-63803
Accession
111575041
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAOCP00000015139PABPPF00658.184.4e-3211
ENSAOCP00000015139RRM_5PF13893.61.9e-0912
ENSAOCP00000015139RRM_5PF13893.61.9e-0922
ENSAOCP00000015139RRM_1PF00076.222.5e-8914
ENSAOCP00000015139RRM_1PF00076.222.5e-8924
ENSAOCP00000015139RRM_1PF00076.222.5e-8934
ENSAOCP00000015139RRM_1PF00076.222.5e-8944
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAOCT00000023702-2995XM_023279941ENSAOCP00000015139634 (aa)XP_023135709UPI000C3104B0
Gene Model
Click here to download ENSAOCG00000019839's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000019839's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAOCG00000019839pabpc1b5937.349ENSAOCG00000019468ELAVL28537.349
ENSAOCG00000019839pabpc1b5937.349ENSAOCG00000005054elavl39237.349
ENSAOCG00000019839pabpc1b5737.333ENSAOCG00000008554rbm196837.333
ENSAOCG00000019839pabpc1b10090.125ENSAOCG00000011656pabpc1a10090.282
ENSAOCG00000019839pabpc1b5534.884ENSAOCG00000001252celf17234.884
ENSAOCG00000019839pabpc1b9975.598ENSAOCG00000021529pabpc49876.077
ENSAOCG00000019839pabpc1b5830.682ENSAOCG00000011133-7130.108
ENSAOCG00000019839pabpc1b5136.047ENSAOCG00000022110-5136.047
ENSAOCG00000019839pabpc1b9866.147ENSAOCG00000006167-9965.991
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAOCG00000019839pabpc1b5880.102ENSG00000184388PABPC1L2B9880.102Homo_sapiens
ENSAOCG00000019839pabpc1b5880.102ENSG00000186288PABPC1L2A9880.102Homo_sapiens
ENSAOCG00000019839pabpc1b10090.282ENSAPOG00000015105pabpc1a10090.282Acanthochromis_polyacanthus
ENSAOCG00000019839pabpc1b10098.896ENSAPOG00000017776pabpc1b10098.896Acanthochromis_polyacanthus
ENSAOCG00000019839pabpc1b5980.102ENSAMEG00000019441-9880.102Ailuropoda_melanoleuca
ENSAOCG00000019839pabpc1b10091.496ENSACIG00000018366pabpc1b10091.496Amphilophus_citrinellus
ENSAOCG00000019839pabpc1b10090.439ENSACIG00000004685pabpc1a10090.439Amphilophus_citrinellus
ENSAOCG00000019839pabpc1b10090.125ENSAPEG00000006963pabpc1a10090.282Amphiprion_percula
ENSAOCG00000019839pabpc1b100100.000ENSAPEG00000010435pabpc1b100100.000Amphiprion_percula
ENSAOCG00000019839pabpc1b10089.969ENSATEG00000024852pabpc1a10090.282Anabas_testudineus
ENSAOCG00000019839pabpc1b10096.541ENSATEG00000012917pabpc1b10096.541Anabas_testudineus
ENSAOCG00000019839pabpc1b5880.102ENSANAG00000019431-9880.102Aotus_nancymaae
ENSAOCG00000019839pabpc1b5880.102ENSANAG00000019429-9880.102Aotus_nancymaae
ENSAOCG00000019839pabpc1b10090.596ENSACLG00000009399pabpc1a10090.618Astatotilapia_calliptera
ENSAOCG00000019839pabpc1b10096.057ENSACLG00000014335pabpc1b10096.057Astatotilapia_calliptera
ENSAOCG00000019839pabpc1b10095.276ENSAMXG00000008599pabpc1b10095.433Astyanax_mexicanus
ENSAOCG00000019839pabpc1b5979.024ENSBTAG00000050902-9879.024Bos_taurus
ENSAOCG00000019839pabpc1b5977.033ENSBTAG00000052491-9877.033Bos_taurus
ENSAOCG00000019839pabpc1b5880.102ENSCJAG00000041326-9880.102Callithrix_jacchus
ENSAOCG00000019839pabpc1b5979.024ENSCAFG00020002052-9879.024Canis_lupus_dingo
ENSAOCG00000019839pabpc1b5880.102ENSCHIG00000006283-9880.102Capra_hircus
ENSAOCG00000019839pabpc1b5880.102ENSCHIG00000011138-9880.102Capra_hircus
ENSAOCG00000019839pabpc1b5880.102ENSTSYG00000001775-9880.102Carlito_syrichta
ENSAOCG00000019839pabpc1b5979.592ENSCPOG00000009525-9879.592Cavia_porcellus
ENSAOCG00000019839pabpc1b5880.102ENSCCAG00000031524-9880.102Cebus_capucinus
ENSAOCG00000019839pabpc1b5880.102ENSCATG00000042826-9880.102Cercocebus_atys
ENSAOCG00000019839pabpc1b5880.102ENSCATG00000043125-9880.102Cercocebus_atys
ENSAOCG00000019839pabpc1b5877.551ENSCLAG00000017409-9877.551Chinchilla_lanigera
ENSAOCG00000019839pabpc1b5877.551ENSCLAG00000017412-9877.551Chinchilla_lanigera
ENSAOCG00000019839pabpc1b5980.102ENSCSAG00000000102-9880.102Chlorocebus_sabaeus
ENSAOCG00000019839pabpc1b5879.558ENSCGRG00001023387-9677.320Cricetulus_griseus_chok1gshd
ENSAOCG00000019839pabpc1b10091.483ENSCSEG00000015241-10091.483Cynoglossus_semilaevis
ENSAOCG00000019839pabpc1b9990.635ENSCSEG00000013324pabpc1a9990.794Cynoglossus_semilaevis
ENSAOCG00000019839pabpc1b10089.812ENSCVAG00000021872pabpc1a10089.969Cyprinodon_variegatus
ENSAOCG00000019839pabpc1b10093.701ENSCVAG00000005489pabpc1b10093.701Cyprinodon_variegatus
ENSAOCG00000019839pabpc1b10091.195ENSDARG00000017219pabpc1a10091.352Danio_rerio
ENSAOCG00000019839pabpc1b10094.961ENSDARG00000021140pabpc1b10095.906Danio_rerio
ENSAOCG00000019839pabpc1b5980.423ENSDNOG00000030926-9878.571Dasypus_novemcinctus
ENSAOCG00000019839pabpc1b5877.551ENSDORG00000011362-9877.551Dipodomys_ordii
ENSAOCG00000019839pabpc1b5978.641ENSEASG00005010399-9878.641Equus_asinus_asinus
ENSAOCG00000019839pabpc1b5978.641ENSECAG00000002620-9878.641Equus_caballus
ENSAOCG00000019839pabpc1b5975.510ENSEEUG00000008203-9875.510Erinaceus_europaeus
ENSAOCG00000019839pabpc1b5959.052ENSELUG00000005389-9759.052Esox_lucius
ENSAOCG00000019839pabpc1b10092.465ENSELUG00000015062-10092.465Esox_lucius
ENSAOCG00000019839pabpc1b9991.509ENSELUG00000003614pabpc1a10091.509Esox_lucius
ENSAOCG00000019839pabpc1b5880.102ENSFCAG00000039701-9880.102Felis_catus
ENSAOCG00000019839pabpc1b5979.592ENSFDAG00000005484-9879.592Fukomys_damarensis
ENSAOCG00000019839pabpc1b10090.125ENSFHEG00000018979pabpc1a10090.282Fundulus_heteroclitus
ENSAOCG00000019839pabpc1b10094.322ENSFHEG00000008186pabpc1b10094.322Fundulus_heteroclitus
ENSAOCG00000019839pabpc1b9989.474ENSGMOG00000013448pabpc1a9989.474Gadus_morhua
ENSAOCG00000019839pabpc1b10085.670ENSGMOG00000002448-10085.670Gadus_morhua
ENSAOCG00000019839pabpc1b10090.125ENSGAFG00000019750pabpc1a10090.439Gambusia_affinis
ENSAOCG00000019839pabpc1b10095.899ENSGAFG00000010193pabpc1b10095.899Gambusia_affinis
ENSAOCG00000019839pabpc1b10091.223ENSGACG00000003572pabpc1a10091.223Gasterosteus_aculeatus
ENSAOCG00000019839pabpc1b10093.302ENSGACG00000003771pabpc1b10093.302Gasterosteus_aculeatus
ENSAOCG00000019839pabpc1b5880.102ENSGGOG00000038606-9880.102Gorilla_gorilla
ENSAOCG00000019839pabpc1b5880.102ENSGGOG00000043933-9880.102Gorilla_gorilla
ENSAOCG00000019839pabpc1b10096.057ENSHBUG00000002075pabpc1b10096.057Haplochromis_burtoni
ENSAOCG00000019839pabpc1b10090.596ENSHBUG00000020487pabpc1a10090.618Haplochromis_burtoni
ENSAOCG00000019839pabpc1b5878.571ENSHGLG00000019668-9878.571Heterocephalus_glaber_female
ENSAOCG00000019839pabpc1b5878.571ENSHGLG00000019762-9878.571Heterocephalus_glaber_female
ENSAOCG00000019839pabpc1b5878.571ENSHGLG00100020854-9878.571Heterocephalus_glaber_male
ENSAOCG00000019839pabpc1b10089.812ENSHCOG00000013502pabpc1a10089.969Hippocampus_comes
ENSAOCG00000019839pabpc1b9871.405ENSHCOG00000003175pabpc1b9971.244Hippocampus_comes
ENSAOCG00000019839pabpc1b10087.087ENSIPUG00000010791-10087.402Ictalurus_punctatus
ENSAOCG00000019839pabpc1b7453.731ENSIPUG00000018724-7653.731Ictalurus_punctatus
ENSAOCG00000019839pabpc1b7454.906ENSIPUG00000021244-6554.906Ictalurus_punctatus
ENSAOCG00000019839pabpc1b10088.661ENSIPUG00000008848pabpc1a10088.661Ictalurus_punctatus
ENSAOCG00000019839pabpc1b5979.592ENSSTOG00000026028-9879.592Ictidomys_tridecemlineatus
ENSAOCG00000019839pabpc1b5979.592ENSSTOG00000022096-9879.592Ictidomys_tridecemlineatus
ENSAOCG00000019839pabpc1b5878.061ENSJJAG00000007037-9878.061Jaculus_jaculus
ENSAOCG00000019839pabpc1b10093.691ENSKMAG00000008049pabpc1b10093.533Kryptolebias_marmoratus
ENSAOCG00000019839pabpc1b10090.439ENSKMAG00000000605pabpc1a10090.439Kryptolebias_marmoratus
ENSAOCG00000019839pabpc1b10090.909ENSLBEG00000024002-10090.909Labrus_bergylta
ENSAOCG00000019839pabpc1b10096.845ENSLBEG00000026845pabpc1b10096.845Labrus_bergylta
ENSAOCG00000019839pabpc1b5979.487ENSLAFG00000023096-9879.487Loxodonta_africana
ENSAOCG00000019839pabpc1b5879.695ENSMFAG00000028878-9879.695Macaca_fascicularis
ENSAOCG00000019839pabpc1b5880.102ENSMMUG00000009740-9880.102Macaca_mulatta
ENSAOCG00000019839pabpc1b5880.102ENSMMUG00000039929-9880.102Macaca_mulatta
ENSAOCG00000019839pabpc1b5880.102ENSMMUG00000037681-9880.102Macaca_mulatta
ENSAOCG00000019839pabpc1b5880.102ENSMNEG00000037732-9880.102Macaca_nemestrina
ENSAOCG00000019839pabpc1b5880.102ENSMLEG00000027495-9880.102Mandrillus_leucophaeus
ENSAOCG00000019839pabpc1b10089.655ENSMAMG00000004502-10090.125Mastacembelus_armatus
ENSAOCG00000019839pabpc1b10096.530ENSMAMG00000014610pabpc1b10096.530Mastacembelus_armatus
ENSAOCG00000019839pabpc1b10096.057ENSMZEG00005026745pabpc1b10096.057Maylandia_zebra
ENSAOCG00000019839pabpc1b10090.596ENSMZEG00005025416pabpc1a10090.618Maylandia_zebra
ENSAOCG00000019839pabpc1b5880.102ENSMICG00000047642-9880.102Microcebus_murinus
ENSAOCG00000019839pabpc1b10090.063ENSMMOG00000018009pabpc1b10090.063Mola_mola
ENSAOCG00000019839pabpc1b9989.474ENSMMOG00000018044pabpc1a10089.474Mola_mola
ENSAOCG00000019839pabpc1b9967.089ENSMODG00000015024-9967.089Monodelphis_domestica
ENSAOCG00000019839pabpc1b9873.408ENSMODG00000013156-9873.726Monodelphis_domestica
ENSAOCG00000019839pabpc1b10090.063ENSMALG00000006066pabpc1b10090.221Monopterus_albus
ENSAOCG00000019839pabpc1b10089.498ENSMALG00000013020-10089.969Monopterus_albus
ENSAOCG00000019839pabpc1b5881.421ENSNGAG00000012688-9878.061Nannospalax_galili
ENSAOCG00000019839pabpc1b10096.057ENSNBRG00000013737pabpc1b10096.057Neolamprologus_brichardi
ENSAOCG00000019839pabpc1b10090.439ENSNBRG00000003068-10090.618Neolamprologus_brichardi
ENSAOCG00000019839pabpc1b5880.102ENSNLEG00000018128-9880.102Nomascus_leucogenys
ENSAOCG00000019839pabpc1b5879.082ENSODEG00000018540-9879.082Octodon_degus
ENSAOCG00000019839pabpc1b10095.899ENSONIG00000002717pabpc1b10095.899Oreochromis_niloticus
ENSAOCG00000019839pabpc1b10089.969ENSONIG00000006871-10089.969Oreochromis_niloticus
ENSAOCG00000019839pabpc1b5980.102ENSOCUG00000002565-9880.102Oryctolagus_cuniculus
ENSAOCG00000019839pabpc1b10087.224ENSORLG00000003008-10087.224Oryzias_latipes
ENSAOCG00000019839pabpc1b9993.112ENSORLG00000002691pabpc1a10093.112Oryzias_latipes
ENSAOCG00000019839pabpc1b10089.028ENSORLG00020022398pabpc1a10089.028Oryzias_latipes_hni
ENSAOCG00000019839pabpc1b10087.224ENSORLG00020022259-10087.224Oryzias_latipes_hni
ENSAOCG00000019839pabpc1b10087.539ENSORLG00015010932-10087.539Oryzias_latipes_hsok
ENSAOCG00000019839pabpc1b10088.871ENSORLG00015013633pabpc110088.871Oryzias_latipes_hsok
ENSAOCG00000019839pabpc1b10089.498ENSOMEG00000020219pabpc1a10089.655Oryzias_melastigma
ENSAOCG00000019839pabpc1b9983.982ENSOMEG00000013627pabpc1b10083.982Oryzias_melastigma
ENSAOCG00000019839pabpc1b5980.102ENSOGAG00000026047-9880.102Otolemur_garnettii
ENSAOCG00000019839pabpc1b5980.102ENSOGAG00000029513-9880.102Otolemur_garnettii
ENSAOCG00000019839pabpc1b5980.102ENSOARG00000005943-9880.102Ovis_aries
ENSAOCG00000019839pabpc1b5880.102ENSPPAG00000012920-9880.102Pan_paniscus
ENSAOCG00000019839pabpc1b5980.102ENSPPRG00000011804-9880.102Panthera_pardus
ENSAOCG00000019839pabpc1b5980.102ENSPPRG00000011809-9880.102Panthera_pardus
ENSAOCG00000019839pabpc1b5880.102ENSPTRG00000028252-9880.102Pan_troglodytes
ENSAOCG00000019839pabpc1b5880.102ENSPANG00000011549-9880.102Papio_anubis
ENSAOCG00000019839pabpc1b10096.378ENSPKIG00000005676pabpc1b10096.378Paramormyrops_kingsleyae
ENSAOCG00000019839pabpc1b7094.395ENSPMGG00000023134-9794.395Periophthalmus_magnuspinnatus
ENSAOCG00000019839pabpc1b7092.152ENSPMGG00000022487pabpc1a9292.152Periophthalmus_magnuspinnatus
ENSAOCG00000019839pabpc1b9970.701ENSPCIG00000016995-5570.701Phascolarctos_cinereus
ENSAOCG00000019839pabpc1b10095.268ENSPFOG00000005917pabpc1b10095.268Poecilia_formosa
ENSAOCG00000019839pabpc1b10088.769ENSPFOG00000010815pabpc1a10089.077Poecilia_formosa
ENSAOCG00000019839pabpc1b10095.584ENSPLAG00000001388pabpc1b10095.584Poecilia_latipinna
ENSAOCG00000019839pabpc1b10090.282ENSPLAG00000004114pabpc1a10090.596Poecilia_latipinna
ENSAOCG00000019839pabpc1b10095.268ENSPMEG00000014399pabpc1b10095.268Poecilia_mexicana
ENSAOCG00000019839pabpc1b10090.282ENSPMEG00000001334pabpc1a10090.596Poecilia_mexicana
ENSAOCG00000019839pabpc1b9990.160ENSPREG00000019595pabpc1a10090.160Poecilia_reticulata
ENSAOCG00000019839pabpc1b10095.584ENSPREG00000010911pabpc1b10095.584Poecilia_reticulata
ENSAOCG00000019839pabpc1b5980.102ENSPPYG00000020468-9880.102Pongo_abelii
ENSAOCG00000019839pabpc1b5980.102ENSPCAG00000005308-9880.102Procavia_capensis
ENSAOCG00000019839pabpc1b5879.592ENSPCOG00000026349-9879.592Propithecus_coquereli
ENSAOCG00000019839pabpc1b5980.513ENSPVAG00000016117-9880.513Pteropus_vampyrus
ENSAOCG00000019839pabpc1b10096.057ENSPNYG00000012578pabpc1b10096.057Pundamilia_nyererei
ENSAOCG00000019839pabpc1b10090.596ENSPNYG00000005192pabpc1a10090.596Pundamilia_nyererei
ENSAOCG00000019839pabpc1b10094.646ENSPNAG00000024626pabpc1b10094.803Pygocentrus_nattereri
ENSAOCG00000019839pabpc1b10091.038ENSPNAG00000028408pabpc1a10091.038Pygocentrus_nattereri
ENSAOCG00000019839pabpc1b5880.102ENSRBIG00000027173-9880.102Rhinopithecus_bieti
ENSAOCG00000019839pabpc1b9989.930ENSRBIG00000028738-9589.930Rhinopithecus_bieti
ENSAOCG00000019839pabpc1b5880.102ENSRROG00000017404-9880.102Rhinopithecus_roxellana
ENSAOCG00000019839pabpc1b9863.505ENSSHAG00000000511-10063.505Sarcophilus_harrisii
ENSAOCG00000019839pabpc1b10091.024ENSSFOG00015006662pabpc1a10091.024Scleropages_formosus
ENSAOCG00000019839pabpc1b10094.953ENSSFOG00015002752-10094.953Scleropages_formosus
ENSAOCG00000019839pabpc1b7080.347ENSSFOG00015019668-9180.347Scleropages_formosus
ENSAOCG00000019839pabpc1b10090.752ENSSMAG00000010803pabpc1a10090.752Scophthalmus_maximus
ENSAOCG00000019839pabpc1b10096.215ENSSMAG00000006869pabpc1b10096.215Scophthalmus_maximus
ENSAOCG00000019839pabpc1b10090.596ENSSDUG00000006675pabpc1a10090.752Seriola_dumerili
ENSAOCG00000019839pabpc1b10095.268ENSSDUG00000011965pabpc1b10095.268Seriola_dumerili
ENSAOCG00000019839pabpc1b10097.027ENSSLDG00000014156pabpc1b10097.027Seriola_lalandi_dorsalis
ENSAOCG00000019839pabpc1b10090.596ENSSLDG00000011661pabpc1a10090.752Seriola_lalandi_dorsalis
ENSAOCG00000019839pabpc1b10089.969ENSSPAG00000014453-10090.125Stegastes_partitus
ENSAOCG00000019839pabpc1b10098.423ENSSPAG00000019265pabpc1b10098.423Stegastes_partitus
ENSAOCG00000019839pabpc1b5880.102ENSSSCG00000036336-9880.102Sus_scrofa
ENSAOCG00000019839pabpc1b5880.102ENSSSCG00000032167-9880.102Sus_scrofa
ENSAOCG00000019839pabpc1b10090.125ENSTRUG00000011577-10090.125Takifugu_rubripes
ENSAOCG00000019839pabpc1b10091.339ENSTRUG00000003767-10091.339Takifugu_rubripes
ENSAOCG00000019839pabpc1b10091.379ENSTNIG00000009153pabpc1b10091.379Tetraodon_nigroviridis
ENSAOCG00000019839pabpc1b10087.017ENSTNIG00000013307pabpc1a10087.017Tetraodon_nigroviridis
ENSAOCG00000019839pabpc1b5980.102ENSTTRG00000013181-9880.102Tursiops_truncatus
ENSAOCG00000019839pabpc1b5880.102ENSUAMG00000008089-9880.102Ursus_americanus
ENSAOCG00000019839pabpc1b9753.560ENSUMAG00000023926-8966.851Ursus_maritimus
ENSAOCG00000019839pabpc1b5880.102ENSUMAG00000003364-9880.102Ursus_maritimus
ENSAOCG00000019839pabpc1b5979.000ENSVVUG00000015892-9779.000Vulpes_vulpes
ENSAOCG00000019839pabpc1b9945.946ENSXETG00000015439-10045.721Xenopus_tropicalis
ENSAOCG00000019839pabpc1b10090.536ENSXCOG00000019901pabpc1b10090.536Xiphophorus_couchianus
ENSAOCG00000019839pabpc1b10086.751ENSXCOG00000017066pabpc1a10086.909Xiphophorus_couchianus
ENSAOCG00000019839pabpc1b10095.741ENSXMAG00000003753pabpc1b10095.741Xiphophorus_maculatus
ENSAOCG00000019839pabpc1b10090.125ENSXMAG00000002555pabpc1a10090.439Xiphophorus_maculatus

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