EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000020272 (Gene tree)
Gene ID: 111573977
Gene Symbol: mbd1b
Alias: mbd1|wu:fi45g12
Full Name: uncharacterized LOC111573977
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 14055 bases
Position: chrNXFZ01002946.1:214963-229017
Accession: 111573977
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000029769	MBD	PF01429.19	3.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000031884	-	4698	XM_023278341	ENSAOCP00000029769	816 (aa)	XP_023134109	UPI000C31267A

Gene Model

Click here to download ENSAOCG00000020272's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000020272's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000020272	mbd1b	100	92.570	ENSAPOG00000012810	mbd1b	100	92.692	Acanthochromis_polyacanthus
ENSAOCG00000020272	mbd1b	99	63.498	ENSACIG00000010590	mbd1b	99	63.882	Amphilophus_citrinellus
ENSAOCG00000020272	mbd1b	100	99.388	ENSAPEG00000023230	mbd1b	100	99.388	Amphiprion_percula
ENSAOCG00000020272	mbd1b	100	76.555	ENSATEG00000009608	mbd1b	100	76.435	Anabas_testudineus
ENSAOCG00000020272	mbd1b	99	76.422	ENSACLG00000021383	mbd1b	100	76.422	Astatotilapia_calliptera
ENSAOCG00000020272	mbd1b	51	36.224	ENSBTAG00000003801	MBD1	63	36.139	Bos_taurus
ENSAOCG00000020272	mbd1b	51	32.420	ENSCPOG00000001671	MBD1	67	30.734	Cavia_porcellus
ENSAOCG00000020272	mbd1b	52	32.947	ENSCATG00000029959	MBD1	69	34.466	Cercocebus_atys
ENSAOCG00000020272	mbd1b	92	62.047	ENSCSEG00000009082	mbd1b	94	62.047	Cynoglossus_semilaevis
ENSAOCG00000020272	mbd1b	99	67.352	ENSCVAG00000001167	mbd1b	99	67.594	Cyprinodon_variegatus
ENSAOCG00000020272	mbd1b	94	36.485	ENSDARG00000025699	mbd1b	88	36.446	Danio_rerio
ENSAOCG00000020272	mbd1b	52	33.186	ENSEASG00005003857	MBD1	50	52.809	Equus_asinus_asinus
ENSAOCG00000020272	mbd1b	52	33.186	ENSECAG00000011497	MBD1	51	34.804	Equus_caballus
ENSAOCG00000020272	mbd1b	96	44.851	ENSELUG00000004375	mbd1b	97	43.715	Esox_lucius
ENSAOCG00000020272	mbd1b	52	32.710	ENSFCAG00000015730	MBD1	51	50.562	Felis_catus
ENSAOCG00000020272	mbd1b	99	65.821	ENSFHEG00000020120	mbd1b	99	65.459	Fundulus_heteroclitus
ENSAOCG00000020272	mbd1b	100	64.536	ENSGAFG00000008975	mbd1b	99	66.143	Gambusia_affinis
ENSAOCG00000020272	mbd1b	72	79.730	ENSGACG00000012106	-	99	79.730	Gasterosteus_aculeatus
ENSAOCG00000020272	mbd1b	99	76.659	ENSHBUG00000014270	mbd1b	100	76.659	Haplochromis_burtoni
ENSAOCG00000020272	mbd1b	51	35.000	ENSHGLG00000008740	MBD1	62	33.990	Heterocephalus_glaber_female
ENSAOCG00000020272	mbd1b	99	56.585	ENSHCOG00000009952	mbd1b	99	56.463	Hippocampus_comes
ENSAOCG00000020272	mbd1b	93	38.519	ENSIPUG00000015243	-	96	37.485	Ictalurus_punctatus
ENSAOCG00000020272	mbd1b	99	66.546	ENSKMAG00000020760	mbd1b	99	66.907	Kryptolebias_marmoratus
ENSAOCG00000020272	mbd1b	50	31.106	ENSLAFG00000031328	MBD1	65	30.769	Loxodonta_africana
ENSAOCG00000020272	mbd1b	52	32.947	ENSMLEG00000043121	MBD1	69	34.466	Mandrillus_leucophaeus
ENSAOCG00000020272	mbd1b	79	74.886	ENSMAMG00000023341	-	96	75.591	Mastacembelus_armatus
ENSAOCG00000020272	mbd1b	99	76.540	ENSMZEG00005010421	mbd1b	100	76.540	Maylandia_zebra
ENSAOCG00000020272	mbd1b	82	91.837	ENSMMOG00000011607	mbd1b	95	91.837	Mola_mola
ENSAOCG00000020272	mbd1b	99	75.513	ENSMALG00000007808	mbd1b	99	75.392	Monopterus_albus
ENSAOCG00000020272	mbd1b	99	76.185	ENSONIG00000020289	mbd1b	99	76.185	Oreochromis_niloticus
ENSAOCG00000020272	mbd1b	99	67.545	ENSORLG00000029390	mbd1b	99	66.946	Oryzias_latipes
ENSAOCG00000020272	mbd1b	99	68.144	ENSORLG00020000575	mbd1b	99	67.545	Oryzias_latipes_hni
ENSAOCG00000020272	mbd1b	99	68.062	ENSORLG00015014812	mbd1b	99	67.584	Oryzias_latipes_hsok
ENSAOCG00000020272	mbd1b	99	65.922	ENSOMEG00000023660	mbd1b	99	66.237	Oryzias_melastigma
ENSAOCG00000020272	mbd1b	52	32.710	ENSPPRG00000021387	MBD1	70	33.659	Panthera_pardus
ENSAOCG00000020272	mbd1b	52	32.401	ENSPTIG00000021231	MBD1	51	50.562	Panthera_tigris_altaica
ENSAOCG00000020272	mbd1b	52	32.947	ENSPANG00000010867	MBD1	69	34.466	Papio_anubis
ENSAOCG00000020272	mbd1b	64	37.594	ENSPCIG00000027937	-	53	61.017	Phascolarctos_cinereus
ENSAOCG00000020272	mbd1b	100	64.656	ENSPFOG00000007511	mbd1b	99	65.821	Poecilia_formosa
ENSAOCG00000020272	mbd1b	100	63.812	ENSPLAG00000021258	mbd1b	99	65.459	Poecilia_latipinna
ENSAOCG00000020272	mbd1b	100	63.932	ENSPMEG00000024145	mbd1b	99	65.659	Poecilia_mexicana
ENSAOCG00000020272	mbd1b	100	64.614	ENSPREG00000021805	mbd1b	99	65.821	Poecilia_reticulata
ENSAOCG00000020272	mbd1b	52	30.655	ENSPCOG00000012450	MBD1	53	52.222	Propithecus_coquereli
ENSAOCG00000020272	mbd1b	91	40.075	ENSPNAG00000018075	mbd1b	92	39.223	Pygocentrus_nattereri
ENSAOCG00000020272	mbd1b	68	54.321	ENSSFOG00015008591	-	66	54.658	Scleropages_formosus
ENSAOCG00000020272	mbd1b	96	74.534	ENSSMAG00000014640	mbd1b	84	74.534	Scophthalmus_maximus
ENSAOCG00000020272	mbd1b	92	80.915	ENSSDUG00000012996	mbd1b	100	73.761	Seriola_dumerili
ENSAOCG00000020272	mbd1b	83	59.275	ENSSLDG00000012422	mbd1b	98	58.761	Seriola_lalandi_dorsalis
ENSAOCG00000020272	mbd1b	100	87.379	ENSSPAG00000021447	mbd1b	99	87.500	Stegastes_partitus
ENSAOCG00000020272	mbd1b	100	65.380	ENSTRUG00000013422	mbd1b	100	65.259	Takifugu_rubripes
ENSAOCG00000020272	mbd1b	63	67.176	ENSTNIG00000007326	-	73	67.176	Tetraodon_nigroviridis
ENSAOCG00000020272	mbd1b	52	31.494	ENSUMAG00000002947	MBD1	62	34.314	Ursus_maritimus
ENSAOCG00000020272	mbd1b	100	63.789	ENSXMAG00000005628	mbd1b	99	64.508	Xiphophorus_maculatus