EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000020398 (Gene tree)
Gene ID: 111579194
Gene Symbol: ssb
Alias: wu:fb17f11
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 7945 bases
Position: chrNXFZ01003426.1:153470-161414
Accession: 111579194
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000015619	RRM_1	PF00076.22	2.4e-12	1	1
ENSAOCP00000015619	RRM_3	PF08777.11	4.4e-29	1	1
ENSAOCP00000015619	La	PF05383.17	6.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000024323	-	2942	XM_023286372	ENSAOCP00000015619	384 (aa)	XP_023142140	UPI000C301675

Gene Model

Click here to download ENSAOCG00000020398's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000020398's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000020398	ssb	100	55.012	ENSG00000138385	SSB	98	65.254	Homo_sapiens
ENSAOCG00000020398	ssb	100	97.917	ENSAPOG00000003448	ssb	100	97.917	Acanthochromis_polyacanthus
ENSAOCG00000020398	ssb	100	53.699	ENSAMEG00000010507	SSB	98	53.494	Ailuropoda_melanoleuca
ENSAOCG00000020398	ssb	96	85.676	ENSACIG00000001738	ssb	96	85.405	Amphilophus_citrinellus
ENSAOCG00000020398	ssb	100	99.479	ENSAPEG00000020395	ssb	100	99.479	Amphiprion_percula
ENSAOCG00000020398	ssb	100	87.469	ENSATEG00000016884	ssb	100	87.469	Anabas_testudineus
ENSAOCG00000020398	ssb	100	53.191	ENSAPLG00000006109	SSB	99	53.081	Anas_platyrhynchos
ENSAOCG00000020398	ssb	100	53.269	ENSACAG00000017008	SSB	99	53.285	Anolis_carolinensis
ENSAOCG00000020398	ssb	100	50.246	ENSANAG00000027195	-	98	49.005	Aotus_nancymaae
ENSAOCG00000020398	ssb	100	78.947	ENSACLG00000010798	ssb	100	78.697	Astatotilapia_calliptera
ENSAOCG00000020398	ssb	100	61.858	ENSAMXG00000012606	ssb	100	62.836	Astyanax_mexicanus
ENSAOCG00000020398	ssb	100	56.049	ENSBTAG00000008716	SSB	98	55.362	Bos_taurus
ENSAOCG00000020398	ssb	78	34.967	WBGene00016653	C44E4.4	76	36.601	Caenorhabditis_elegans
ENSAOCG00000020398	ssb	100	55.911	ENSCJAG00000045073	SSB	98	55.473	Callithrix_jacchus
ENSAOCG00000020398	ssb	100	55.528	ENSCAFG00000012418	SSB	98	54.839	Canis_familiaris
ENSAOCG00000020398	ssb	100	55.528	ENSCAFG00020002900	SSB	98	54.839	Canis_lupus_dingo
ENSAOCG00000020398	ssb	100	55.911	ENSCHIG00000022624	-	98	55.224	Capra_hircus
ENSAOCG00000020398	ssb	100	52.778	ENSCHIG00000022196	-	82	58.769	Capra_hircus
ENSAOCG00000020398	ssb	99	55.802	ENSTSYG00000000097	SSB	98	55.112	Carlito_syrichta
ENSAOCG00000020398	ssb	100	56.404	ENSCPOG00000003338	SSB	98	55.721	Cavia_porcellus
ENSAOCG00000020398	ssb	100	55.419	ENSCCAG00000035147	SSB	98	54.975	Cebus_capucinus
ENSAOCG00000020398	ssb	99	41.397	ENSCATG00000042909	-	98	41.045	Cercocebus_atys
ENSAOCG00000020398	ssb	71	50.859	ENSCATG00000036701	SSB	83	50.515	Cercocebus_atys
ENSAOCG00000020398	ssb	100	56.158	ENSCLAG00000015617	-	98	55.473	Chinchilla_lanigera
ENSAOCG00000020398	ssb	100	55.665	ENSCSAG00000015200	SSB	88	55.419	Chlorocebus_sabaeus
ENSAOCG00000020398	ssb	98	52.243	ENSCSAG00000018390	-	95	51.451	Chlorocebus_sabaeus
ENSAOCG00000020398	ssb	100	55.911	ENSCHOG00000007763	SSB	98	55.224	Choloepus_hoffmanni
ENSAOCG00000020398	ssb	100	57.805	ENSCPBG00000006519	SSB	99	58.049	Chrysemys_picta_bellii
ENSAOCG00000020398	ssb	97	45.333	ENSCANG00000028838	-	88	45.213	Colobus_angolensis_palliatus
ENSAOCG00000020398	ssb	99	50.256	ENSCANG00000033240	-	94	50.000	Colobus_angolensis_palliatus
ENSAOCG00000020398	ssb	100	55.665	ENSCANG00000027695	SSB	98	55.224	Colobus_angolensis_palliatus
ENSAOCG00000020398	ssb	100	52.206	ENSCGRG00001024831	Ssb	98	52.605	Cricetulus_griseus_chok1gshd
ENSAOCG00000020398	ssb	100	52.206	ENSCGRG00000005387	Ssb	98	52.605	Cricetulus_griseus_crigri
ENSAOCG00000020398	ssb	100	85.464	ENSCSEG00000011599	ssb	100	84.962	Cynoglossus_semilaevis
ENSAOCG00000020398	ssb	100	79.500	ENSCVAG00000021558	ssb	100	80.250	Cyprinodon_variegatus
ENSAOCG00000020398	ssb	100	64.604	ENSDARG00000029252	ssb	100	64.604	Danio_rerio
ENSAOCG00000020398	ssb	100	55.911	ENSDNOG00000013450	SSB	98	55.224	Dasypus_novemcinctus
ENSAOCG00000020398	ssb	100	53.465	ENSDORG00000005543	Ssb	98	53.250	Dipodomys_ordii
ENSAOCG00000020398	ssb	88	36.441	FBgn0011638	La	78	37.578	Drosophila_melanogaster
ENSAOCG00000020398	ssb	53	64.851	ENSETEG00000004614	-	52	64.851	Echinops_telfairi
ENSAOCG00000020398	ssb	85	47.561	ENSEBUG00000001237	ssb	83	47.692	Eptatretus_burgeri
ENSAOCG00000020398	ssb	100	56.404	ENSEASG00005022835	SSB	98	55.721	Equus_asinus_asinus
ENSAOCG00000020398	ssb	100	56.404	ENSECAG00000018495	SSB	98	55.721	Equus_caballus
ENSAOCG00000020398	ssb	79	49.351	ENSEEUG00000008077	SSB	77	49.013	Erinaceus_europaeus
ENSAOCG00000020398	ssb	100	73.383	ENSELUG00000020929	ssb	100	73.632	Esox_lucius
ENSAOCG00000020398	ssb	100	56.757	ENSFCAG00000011601	SSB	98	56.079	Felis_catus
ENSAOCG00000020398	ssb	99	55.528	ENSFALG00000000930	SSB	99	55.283	Ficedula_albicollis
ENSAOCG00000020398	ssb	100	56.158	ENSFDAG00000000598	SSB	98	55.473	Fukomys_damarensis
ENSAOCG00000020398	ssb	77	76.490	ENSFHEG00000003268	ssb	94	79.479	Fundulus_heteroclitus
ENSAOCG00000020398	ssb	99	72.000	ENSGMOG00000002664	ssb	100	72.000	Gadus_morhua
ENSAOCG00000020398	ssb	98	58.333	ENSGALG00000009677	SSB	93	57.031	Gallus_gallus
ENSAOCG00000020398	ssb	100	81.390	ENSGAFG00000002749	ssb	100	81.886	Gambusia_affinis
ENSAOCG00000020398	ssb	100	79.703	ENSGACG00000005107	ssb	100	79.703	Gasterosteus_aculeatus
ENSAOCG00000020398	ssb	100	57.561	ENSGAGG00000007807	SSB	99	57.805	Gopherus_agassizii
ENSAOCG00000020398	ssb	98	49.077	ENSGGOG00000024891	-	92	49.077	Gorilla_gorilla
ENSAOCG00000020398	ssb	52	50.224	ENSGGOG00000023471	-	90	49.776	Gorilla_gorilla
ENSAOCG00000020398	ssb	100	78.947	ENSHBUG00000006584	ssb	100	78.697	Haplochromis_burtoni
ENSAOCG00000020398	ssb	100	55.825	ENSHGLG00000017580	-	98	55.283	Heterocephalus_glaber_female
ENSAOCG00000020398	ssb	99	50.746	ENSHGLG00000004478	-	98	50.124	Heterocephalus_glaber_female
ENSAOCG00000020398	ssb	100	52.417	ENSHGLG00000005832	-	98	51.671	Heterocephalus_glaber_female
ENSAOCG00000020398	ssb	100	52.000	ENSHGLG00100008767	-	98	51.263	Heterocephalus_glaber_male
ENSAOCG00000020398	ssb	100	55.825	ENSHGLG00100003084	-	98	55.283	Heterocephalus_glaber_male
ENSAOCG00000020398	ssb	99	76.826	ENSHCOG00000019011	ssb	99	76.515	Hippocampus_comes
ENSAOCG00000020398	ssb	100	64.390	ENSIPUG00000003681	SSB	100	64.390	Ictalurus_punctatus
ENSAOCG00000020398	ssb	100	55.665	ENSSTOG00000008416	SSB	98	54.975	Ictidomys_tridecemlineatus
ENSAOCG00000020398	ssb	89	46.499	ENSJJAG00000016250	-	94	45.938	Jaculus_jaculus
ENSAOCG00000020398	ssb	100	51.914	ENSJJAG00000023158	-	99	51.559	Jaculus_jaculus
ENSAOCG00000020398	ssb	100	84.673	ENSKMAG00000017317	ssb	100	84.673	Kryptolebias_marmoratus
ENSAOCG00000020398	ssb	100	85.063	ENSLBEG00000017345	ssb	100	85.063	Labrus_bergylta
ENSAOCG00000020398	ssb	100	53.790	ENSLACG00000014056	SSB	99	54.279	Latimeria_chalumnae
ENSAOCG00000020398	ssb	95	69.126	ENSLOCG00000007933	ssb	99	65.012	Lepisosteus_oculatus
ENSAOCG00000020398	ssb	98	54.962	ENSLAFG00000000867	-	99	52.494	Loxodonta_africana
ENSAOCG00000020398	ssb	100	48.889	ENSLAFG00000028909	-	99	48.148	Loxodonta_africana
ENSAOCG00000020398	ssb	78	43.144	ENSLAFG00000026721	-	98	43.144	Loxodonta_africana
ENSAOCG00000020398	ssb	93	49.307	ENSMFAG00000041478	-	90	51.692	Macaca_fascicularis
ENSAOCG00000020398	ssb	100	55.665	ENSMFAG00000039066	SSB	98	55.224	Macaca_fascicularis
ENSAOCG00000020398	ssb	98	49.474	ENSMMUG00000011724	-	77	53.374	Macaca_mulatta
ENSAOCG00000020398	ssb	99	40.648	ENSMMUG00000039889	-	98	40.547	Macaca_mulatta
ENSAOCG00000020398	ssb	100	55.665	ENSMMUG00000023051	SSB	98	55.224	Macaca_mulatta
ENSAOCG00000020398	ssb	93	49.307	ENSMNEG00000034698	-	90	51.692	Macaca_nemestrina
ENSAOCG00000020398	ssb	100	46.585	ENSMNEG00000028321	SSB	82	67.568	Macaca_nemestrina
ENSAOCG00000020398	ssb	100	55.665	ENSMLEG00000035717	SSB	98	55.224	Mandrillus_leucophaeus
ENSAOCG00000020398	ssb	100	38.272	ENSMLEG00000042644	-	78	41.231	Mandrillus_leucophaeus
ENSAOCG00000020398	ssb	100	87.437	ENSMAMG00000004800	ssb	100	87.437	Mastacembelus_armatus
ENSAOCG00000020398	ssb	100	78.947	ENSMZEG00005005749	ssb	100	78.697	Maylandia_zebra
ENSAOCG00000020398	ssb	95	59.783	ENSMGAG00000010328	SSB	100	63.285	Meleagris_gallopavo
ENSAOCG00000020398	ssb	96	53.887	ENSMICG00000033304	-	93	53.117	Microcebus_murinus
ENSAOCG00000020398	ssb	100	55.911	ENSMICG00000028252	-	98	55.224	Microcebus_murinus
ENSAOCG00000020398	ssb	96	56.430	ENSMODG00000008227	-	99	54.390	Monodelphis_domestica
ENSAOCG00000020398	ssb	100	36.453	ENSMODG00000007027	-	99	44.581	Monodelphis_domestica
ENSAOCG00000020398	ssb	96	39.946	ENSMODG00000019271	-	99	46.914	Monodelphis_domestica
ENSAOCG00000020398	ssb	95	83.106	ENSMALG00000008045	ssb	90	85.215	Monopterus_albus
ENSAOCG00000020398	ssb	100	52.289	MGP_CAROLIEiJ_G0023629	-	96	64.052	Mus_caroli
ENSAOCG00000020398	ssb	100	52.289	ENSMUSG00000068882	Ssb	96	64.052	Mus_musculus
ENSAOCG00000020398	ssb	100	52.048	MGP_PahariEiJ_G0025081	-	96	63.399	Mus_pahari
ENSAOCG00000020398	ssb	100	52.289	MGP_SPRETEiJ_G0024551	Ssb	96	64.052	Mus_spretus
ENSAOCG00000020398	ssb	100	56.404	ENSMPUG00000000785	SSB	98	55.721	Mustela_putorius_furo
ENSAOCG00000020398	ssb	100	55.181	ENSMLUG00000016316	SSB	99	54.940	Myotis_lucifugus
ENSAOCG00000020398	ssb	100	78.750	ENSNBRG00000012661	ssb	100	78.500	Neolamprologus_brichardi
ENSAOCG00000020398	ssb	87	46.291	ENSNLEG00000028754	-	76	46.769	Nomascus_leucogenys
ENSAOCG00000020398	ssb	100	55.419	ENSNLEG00000004958	SSB	98	54.975	Nomascus_leucogenys
ENSAOCG00000020398	ssb	65	63.200	ENSMEUG00000001650	-	100	63.200	Notamacropus_eugenii
ENSAOCG00000020398	ssb	93	56.111	ENSODEG00000004202	-	99	55.801	Octodon_degus
ENSAOCG00000020398	ssb	100	79.750	ENSONIG00000008776	ssb	100	79.500	Oreochromis_niloticus
ENSAOCG00000020398	ssb	100	55.665	ENSOANG00000008543	SSB	99	55.665	Ornithorhynchus_anatinus
ENSAOCG00000020398	ssb	100	54.926	ENSOCUG00000010396	SSB	99	54.680	Oryctolagus_cuniculus
ENSAOCG00000020398	ssb	100	82.000	ENSORLG00000017208	ssb	100	82.000	Oryzias_latipes
ENSAOCG00000020398	ssb	100	81.297	ENSORLG00020022574	ssb	100	81.546	Oryzias_latipes_hni
ENSAOCG00000020398	ssb	100	82.500	ENSORLG00015016592	ssb	100	82.500	Oryzias_latipes_hsok
ENSAOCG00000020398	ssb	100	83.000	ENSOMEG00000003193	ssb	100	82.750	Oryzias_melastigma
ENSAOCG00000020398	ssb	98	54.569	ENSOGAG00000029768	SSB	92	54.359	Otolemur_garnettii
ENSAOCG00000020398	ssb	100	55.911	ENSOARG00000002906	SSB	98	55.224	Ovis_aries
ENSAOCG00000020398	ssb	100	55.012	ENSPPAG00000042673	SSB	98	54.568	Pan_paniscus
ENSAOCG00000020398	ssb	100	47.044	ENSPPAG00000032427	-	96	59.677	Pan_paniscus
ENSAOCG00000020398	ssb	86	47.429	ENSPPAG00000006189	-	91	44.751	Pan_paniscus
ENSAOCG00000020398	ssb	100	56.757	ENSPPRG00000006599	SSB	98	56.079	Panthera_pardus
ENSAOCG00000020398	ssb	100	56.757	ENSPTIG00000011021	SSB	96	56.079	Panthera_tigris_altaica
ENSAOCG00000020398	ssb	100	55.012	ENSPTRG00000012620	SSB	98	54.568	Pan_troglodytes
ENSAOCG00000020398	ssb	100	44.581	ENSPTRG00000042880	-	99	44.581	Pan_troglodytes
ENSAOCG00000020398	ssb	98	39.842	ENSPANG00000031877	-	74	42.089	Papio_anubis
ENSAOCG00000020398	ssb	100	55.665	ENSPANG00000007440	SSB	98	55.224	Papio_anubis
ENSAOCG00000020398	ssb	99	41.353	ENSPANG00000034126	-	77	45.538	Papio_anubis
ENSAOCG00000020398	ssb	100	70.823	ENSPKIG00000019325	ssb	99	70.823	Paramormyrops_kingsleyae
ENSAOCG00000020398	ssb	100	56.585	ENSPSIG00000002265	SSB	93	56.829	Pelodiscus_sinensis
ENSAOCG00000020398	ssb	91	75.852	ENSPMGG00000020075	ssb	91	75.852	Periophthalmus_magnuspinnatus
ENSAOCG00000020398	ssb	83	46.562	ENSPMAG00000002982	ssb	86	46.237	Petromyzon_marinus
ENSAOCG00000020398	ssb	99	56.923	ENSPCIG00000028591	-	99	56.404	Phascolarctos_cinereus
ENSAOCG00000020398	ssb	100	83.500	ENSPFOG00000009650	ssb	100	83.500	Poecilia_formosa
ENSAOCG00000020398	ssb	100	83.000	ENSPLAG00000020498	ssb	100	83.500	Poecilia_latipinna
ENSAOCG00000020398	ssb	100	83.500	ENSPMEG00000001051	ssb	100	83.500	Poecilia_mexicana
ENSAOCG00000020398	ssb	97	86.828	ENSPREG00000003708	ssb	98	86.595	Poecilia_reticulata
ENSAOCG00000020398	ssb	100	55.419	ENSPPYG00000012919	SSB	98	54.975	Pongo_abelii
ENSAOCG00000020398	ssb	95	54.688	ENSPCAG00000010276	SSB	99	54.427	Procavia_capensis
ENSAOCG00000020398	ssb	100	50.246	ENSPCOG00000023189	-	98	49.502	Propithecus_coquereli
ENSAOCG00000020398	ssb	100	53.695	ENSPCOG00000015741	-	89	64.286	Propithecus_coquereli
ENSAOCG00000020398	ssb	93	59.104	ENSPVAG00000006615	SSB	99	59.104	Pteropus_vampyrus
ENSAOCG00000020398	ssb	100	78.947	ENSPNYG00000006444	ssb	100	78.697	Pundamilia_nyererei
ENSAOCG00000020398	ssb	100	63.325	ENSPNAG00000011708	ssb	100	64.059	Pygocentrus_nattereri
ENSAOCG00000020398	ssb	100	52.048	ENSRNOG00000007998	Ssb	98	51.582	Rattus_norvegicus
ENSAOCG00000020398	ssb	97	54.545	ENSRNOG00000011606	AABR07061825.1	92	54.278	Rattus_norvegicus
ENSAOCG00000020398	ssb	92	49.292	ENSRBIG00000041232	-	88	57.143	Rhinopithecus_bieti
ENSAOCG00000020398	ssb	86	51.714	ENSRBIG00000041608	-	94	49.429	Rhinopithecus_bieti
ENSAOCG00000020398	ssb	100	48.780	ENSRBIG00000041972	SSB	85	67.568	Rhinopithecus_bieti
ENSAOCG00000020398	ssb	99	40.050	ENSRBIG00000029918	-	98	39.702	Rhinopithecus_bieti
ENSAOCG00000020398	ssb	86	53.714	ENSRROG00000034102	-	96	49.370	Rhinopithecus_roxellana
ENSAOCG00000020398	ssb	99	45.025	ENSRROG00000007149	-	98	44.665	Rhinopithecus_roxellana
ENSAOCG00000020398	ssb	98	49.081	ENSRROG00000031684	-	88	60.135	Rhinopithecus_roxellana
ENSAOCG00000020398	ssb	100	55.665	ENSRROG00000040346	SSB	98	55.224	Rhinopithecus_roxellana
ENSAOCG00000020398	ssb	100	55.665	ENSSBOG00000027204	SSB	98	55.224	Saimiri_boliviensis_boliviensis
ENSAOCG00000020398	ssb	100	55.911	ENSSHAG00000018062	SSB	99	55.911	Sarcophilus_harrisii
ENSAOCG00000020398	ssb	100	69.136	ENSSFOG00015000550	ssb	99	69.136	Scleropages_formosus
ENSAOCG00000020398	ssb	96	90.027	ENSSMAG00000013885	ssb	99	90.836	Scophthalmus_maximus
ENSAOCG00000020398	ssb	100	90.704	ENSSDUG00000020117	ssb	100	90.704	Seriola_dumerili
ENSAOCG00000020398	ssb	100	85.930	ENSSLDG00000002525	ssb	100	85.678	Seriola_lalandi_dorsalis
ENSAOCG00000020398	ssb	95	51.042	ENSSARG00000007747	SSB	99	51.042	Sorex_araneus
ENSAOCG00000020398	ssb	100	57.843	ENSSPUG00000012112	SSB	99	57.946	Sphenodon_punctatus
ENSAOCG00000020398	ssb	100	95.312	ENSSPAG00000005696	ssb	100	95.312	Stegastes_partitus
ENSAOCG00000020398	ssb	99	53.646	ENSSSCG00000015938	SSB	94	53.158	Sus_scrofa
ENSAOCG00000020398	ssb	96	58.289	ENSTGUG00000007942	SSB	90	58.021	Taeniopygia_guttata
ENSAOCG00000020398	ssb	100	81.910	ENSTRUG00000017839	ssb	100	81.910	Takifugu_rubripes
ENSAOCG00000020398	ssb	95	81.199	ENSTNIG00000000915	ssb	91	87.963	Tetraodon_nigroviridis
ENSAOCG00000020398	ssb	78	67.826	ENSTBEG00000009056	SSB	74	67.826	Tupaia_belangeri
ENSAOCG00000020398	ssb	100	56.757	ENSTTRG00000002152	SSB	98	56.079	Tursiops_truncatus
ENSAOCG00000020398	ssb	98	58.047	ENSUAMG00000027833	SSB	98	57.333	Ursus_americanus
ENSAOCG00000020398	ssb	100	55.528	ENSUMAG00000013907	SSB	98	54.839	Ursus_maritimus
ENSAOCG00000020398	ssb	100	57.214	ENSVPAG00000007183	SSB	98	56.533	Vicugna_pacos
ENSAOCG00000020398	ssb	100	55.528	ENSVVUG00000016573	SSB	76	54.839	Vulpes_vulpes
ENSAOCG00000020398	ssb	100	54.962	ENSXETG00000025402	ssb	91	55.128	Xenopus_tropicalis
ENSAOCG00000020398	ssb	97	80.914	ENSXCOG00000019109	ssb	97	80.914	Xiphophorus_couchianus
ENSAOCG00000020398	ssb	100	80.149	ENSXMAG00000004888	ssb	100	80.149	Xiphophorus_maculatus