EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000020491 (Gene tree)
Gene ID: 111573968
Gene Symbol: si:dkey-13a21.4
Alias: zgc:110195
Full Name: ras-related protein rab7-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 3762 bases
Position: chrNXFZ01002946.1:142986-146747
Accession: 111573968
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000015673	MMR_HSR1	PF01926.23	1.5e-06	1	1
ENSAOCP00000015686	MMR_HSR1	PF01926.23	2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000024408	-	744	-	ENSAOCP00000015686	242 (aa)	-	-
ENSAOCT00000024473	-	615	XM_023278330	ENSAOCP00000015673	204 (aa)	XP_023134098	-

Gene Model

Click here to download ENSAOCG00000020491's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000020491's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000020491	si:dkey-13a21.4	77	42.405	ENSAOCG00000005934	rab35b	76	42.405
ENSAOCG00000020491	si:dkey-13a21.4	60	31.034	ENSAOCG00000017428	kras	88	30.814
ENSAOCG00000020491	si:dkey-13a21.4	74	38.462	ENSAOCG00000005301	-	63	38.462
ENSAOCG00000020491	si:dkey-13a21.4	79	39.506	ENSAOCG00000024149	-	74	39.506
ENSAOCG00000020491	si:dkey-13a21.4	71	32.192	ENSAOCG00000002921	rras2	76	32.484
ENSAOCG00000020491	si:dkey-13a21.4	77	35.443	ENSAOCG00000020106	rab11a	83	32.258
ENSAOCG00000020491	si:dkey-13a21.4	86	34.078	ENSAOCG00000007106	rab34b	64	34.078
ENSAOCG00000020491	si:dkey-13a21.4	79	38.272	ENSAOCG00000000090	rab5aa	73	38.272
ENSAOCG00000020491	si:dkey-13a21.4	77	36.709	ENSAOCG00000003528	rab25a	73	36.709
ENSAOCG00000020491	si:dkey-13a21.4	77	37.975	ENSAOCG00000015713	rab25b	75	37.975
ENSAOCG00000020491	si:dkey-13a21.4	79	34.146	ENSAOCG00000006604	dnajc27	60	34.146
ENSAOCG00000020491	si:dkey-13a21.4	81	34.706	ENSAOCG00000010265	rheb	89	34.706
ENSAOCG00000020491	si:dkey-13a21.4	78	35.802	ENSAOCG00000015678	rab11al	80	33.333
ENSAOCG00000020491	si:dkey-13a21.4	73	41.333	ENSAOCG00000005790	rab33ba	60	41.333
ENSAOCG00000020491	si:dkey-13a21.4	86	36.158	ENSAOCG00000005797	rab15	81	36.158
ENSAOCG00000020491	si:dkey-13a21.4	95	35.567	ENSAOCG00000001554	rab22a	97	35.567
ENSAOCG00000020491	si:dkey-13a21.4	73	41.611	ENSAOCG00000016233	rab18a	76	40.506
ENSAOCG00000020491	si:dkey-13a21.4	73	40.000	ENSAOCG00000015948	-	70	40.000
ENSAOCG00000020491	si:dkey-13a21.4	96	35.323	ENSAOCG00000011103	rab6bb	94	35.323
ENSAOCG00000020491	si:dkey-13a21.4	88	34.973	ENSAOCG00000018544	rab34a	68	34.973
ENSAOCG00000020491	si:dkey-13a21.4	84	35.088	ENSAOCG00000008069	rabl2	73	35.088
ENSAOCG00000020491	si:dkey-13a21.4	79	36.420	ENSAOCG00000008492	rab14	80	36.158
ENSAOCG00000020491	si:dkey-13a21.4	74	30.128	ENSAOCG00000010160	si:cabz01085950.1	73	30.128
ENSAOCG00000020491	si:dkey-13a21.4	79	36.420	ENSAOCG00000018191	-	80	36.158
ENSAOCG00000020491	si:dkey-13a21.4	77	35.000	ENSAOCG00000018849	-	71	35.000
ENSAOCG00000020491	si:dkey-13a21.4	89	32.642	ENSAOCG00000009167	-	83	32.642
ENSAOCG00000020491	si:dkey-13a21.4	77	38.994	ENSAOCG00000012921	rab42a	60	38.994
ENSAOCG00000020491	si:dkey-13a21.4	98	51.456	ENSAOCG00000005772	RAB7A	99	51.456
ENSAOCG00000020491	si:dkey-13a21.4	96	36.500	ENSAOCG00000022426	RAB41	92	36.500
ENSAOCG00000020491	si:dkey-13a21.4	96	35.821	ENSAOCG00000012277	-	94	35.821
ENSAOCG00000020491	si:dkey-13a21.4	88	39.444	ENSAOCG00000016825	si:dkey-16l2.16	92	36.869
ENSAOCG00000020491	si:dkey-13a21.4	96	37.255	ENSAOCG00000007448	rab33a	71	37.255
ENSAOCG00000020491	si:dkey-13a21.4	78	30.303	ENSAOCG00000007065	rasl11a	74	30.653
ENSAOCG00000020491	si:dkey-13a21.4	77	35.000	ENSAOCG00000018239	rab11bb	71	35.000
ENSAOCG00000020491	si:dkey-13a21.4	78	51.553	ENSAOCG00000020020	-	89	45.876
ENSAOCG00000020491	si:dkey-13a21.4	59	42.975	ENSAOCG00000013808	-	90	42.149
ENSAOCG00000020491	si:dkey-13a21.4	87	31.285	ENSAOCG00000004234	rab23	93	32.990
ENSAOCG00000020491	si:dkey-13a21.4	79	38.889	ENSAOCG00000020606	-	89	36.264
ENSAOCG00000020491	si:dkey-13a21.4	88	54.696	ENSAOCG00000008820	-	87	54.696
ENSAOCG00000020491	si:dkey-13a21.4	77	33.125	ENSAOCG00000017207	si:ch73-116o1.2	75	33.125
ENSAOCG00000020491	si:dkey-13a21.4	79	38.889	ENSAOCG00000006385	rab1ab	90	36.022
ENSAOCG00000020491	si:dkey-13a21.4	81	31.138	ENSAOCG00000007510	rhebl1	89	31.138
ENSAOCG00000020491	si:dkey-13a21.4	94	32.524	ENSAOCG00000018241	rab36	76	32.524
ENSAOCG00000020491	si:dkey-13a21.4	67	31.707	ENSAOCG00000011925	rasd4	77	31.707
ENSAOCG00000020491	si:dkey-13a21.4	77	37.736	ENSAOCG00000007928	RAB39B	73	37.736
ENSAOCG00000020491	si:dkey-13a21.4	57	32.479	ENSAOCG00000010636	RAP2B	89	33.594
ENSAOCG00000020491	si:dkey-13a21.4	96	36.318	ENSAOCG00000002298	rab6ba	94	36.318
ENSAOCG00000020491	si:dkey-13a21.4	79	49.383	ENSAOCG00000013441	rab9a	79	49.383
ENSAOCG00000020491	si:dkey-13a21.4	60	31.724	ENSAOCG00000011843	hrasb	96	30.645
ENSAOCG00000020491	si:dkey-13a21.4	79	37.654	ENSAOCG00000016614	rab5c	72	37.654
ENSAOCG00000020491	si:dkey-13a21.4	87	36.517	ENSAOCG00000015908	-	87	36.517
ENSAOCG00000020491	si:dkey-13a21.4	79	51.235	ENSAOCG00000011596	RAB9A	97	45.876
ENSAOCG00000020491	si:dkey-13a21.4	72	31.973	ENSAOCG00000012766	rras	79	32.704
ENSAOCG00000020491	si:dkey-13a21.4	77	35.000	ENSAOCG00000018050	rab11ba	79	32.222
ENSAOCG00000020491	si:dkey-13a21.4	73	42.282	ENSAOCG00000013479	rab18b	76	41.139
ENSAOCG00000020491	si:dkey-13a21.4	79	37.654	ENSAOCG00000014658	rab2a	75	37.654
ENSAOCG00000020491	si:dkey-13a21.4	86	36.158	ENSAOCG00000002532	RAB15	82	36.158
ENSAOCG00000020491	si:dkey-13a21.4	91	41.398	ENSAOCG00000012556	rab30	65	41.398
ENSAOCG00000020491	si:dkey-13a21.4	93	38.743	ENSAOCG00000024675	zgc:101559	77	38.743
ENSAOCG00000020491	si:dkey-13a21.4	79	37.654	ENSAOCG00000003965	rab1ba	80	37.654
ENSAOCG00000020491	si:dkey-13a21.4	89	48.108	ENSAOCG00000022810	rab9b	99	46.231
ENSAOCG00000020491	si:dkey-13a21.4	78	37.888	ENSAOCG00000002130	rab12	65	37.888

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000020491	si:dkey-13a21.4	100	87.255	ENSACIG00000011024	si:dkey-13a21.4	100	87.255	Amphilophus_citrinellus
ENSAOCG00000020491	si:dkey-13a21.4	100	97.549	ENSAPEG00000023338	si:dkey-13a21.4	92	97.549	Amphiprion_percula
ENSAOCG00000020491	si:dkey-13a21.4	100	81.373	ENSATEG00000014958	si:dkey-13a21.4	100	81.373	Anabas_testudineus
ENSAOCG00000020491	si:dkey-13a21.4	96	50.769	ENSACAG00000012345	-	97	50.769	Anolis_carolinensis
ENSAOCG00000020491	si:dkey-13a21.4	100	86.765	ENSACLG00000021109	si:dkey-13a21.4	99	86.765	Astatotilapia_calliptera
ENSAOCG00000020491	si:dkey-13a21.4	96	57.426	ENSAMXG00000032663	si:dkey-13a21.4	93	57.426	Astyanax_mexicanus
ENSAOCG00000020491	si:dkey-13a21.4	89	57.377	WBGene00004271	rab-7	100	52.153	Caenorhabditis_elegans
ENSAOCG00000020491	si:dkey-13a21.4	100	85.294	ENSCVAG00000001150	si:dkey-13a21.4	100	85.294	Cyprinodon_variegatus
ENSAOCG00000020491	si:dkey-13a21.4	96	63.590	ENSDARG00000026098	si:dkey-13a21.4	95	63.590	Danio_rerio
ENSAOCG00000020491	si:dkey-13a21.4	87	51.111	ENSDNOG00000043559	-	96	48.485	Dasypus_novemcinctus
ENSAOCG00000020491	si:dkey-13a21.4	100	82.927	ENSFHEG00000002502	si:dkey-13a21.4	100	82.927	Fundulus_heteroclitus
ENSAOCG00000020491	si:dkey-13a21.4	100	81.373	ENSGAFG00000020102	si:dkey-13a21.4	100	81.373	Gambusia_affinis
ENSAOCG00000020491	si:dkey-13a21.4	100	87.255	ENSHBUG00000014023	si:dkey-13a21.4	99	87.255	Haplochromis_burtoni
ENSAOCG00000020491	si:dkey-13a21.4	86	78.977	ENSKMAG00000021039	si:dkey-13a21.4	76	77.901	Kryptolebias_marmoratus
ENSAOCG00000020491	si:dkey-13a21.4	100	80.392	ENSLBEG00000018180	si:dkey-13a21.4	100	80.392	Labrus_bergylta
ENSAOCG00000020491	si:dkey-13a21.4	100	60.680	ENSLOCG00000014749	si:dkey-13a21.4	100	60.680	Lepisosteus_oculatus
ENSAOCG00000020491	si:dkey-13a21.4	84	53.801	ENSLAFG00000028984	-	83	53.801	Loxodonta_africana
ENSAOCG00000020491	si:dkey-13a21.4	100	83.824	ENSMAMG00000021095	si:dkey-13a21.4	100	83.824	Mastacembelus_armatus
ENSAOCG00000020491	si:dkey-13a21.4	100	86.765	ENSMZEG00005010220	si:dkey-13a21.4	99	86.765	Maylandia_zebra
ENSAOCG00000020491	si:dkey-13a21.4	99	86.700	ENSNBRG00000023214	si:dkey-13a21.4	99	86.700	Neolamprologus_brichardi
ENSAOCG00000020491	si:dkey-13a21.4	100	86.275	ENSONIG00000020296	si:dkey-13a21.4	100	86.275	Oreochromis_niloticus
ENSAOCG00000020491	si:dkey-13a21.4	100	76.961	ENSORLG00000025098	si:dkey-13a21.4	100	76.961	Oryzias_latipes
ENSAOCG00000020491	si:dkey-13a21.4	100	76.961	ENSORLG00020019465	si:dkey-13a21.4	100	76.961	Oryzias_latipes_hni
ENSAOCG00000020491	si:dkey-13a21.4	100	77.451	ENSORLG00015015121	si:dkey-13a21.4	100	77.451	Oryzias_latipes_hsok
ENSAOCG00000020491	si:dkey-13a21.4	96	62.437	ENSPKIG00000008691	si:dkey-13a21.4	96	62.437	Paramormyrops_kingsleyae
ENSAOCG00000020491	si:dkey-13a21.4	99	76.119	ENSPMGG00000023170	si:dkey-13a21.4	96	76.119	Periophthalmus_magnuspinnatus
ENSAOCG00000020491	si:dkey-13a21.4	100	82.353	ENSPFOG00000015409	si:dkey-13a21.4	100	82.353	Poecilia_formosa
ENSAOCG00000020491	si:dkey-13a21.4	100	82.353	ENSPLAG00000019688	si:dkey-13a21.4	100	82.353	Poecilia_latipinna
ENSAOCG00000020491	si:dkey-13a21.4	100	82.353	ENSPMEG00000019159	si:dkey-13a21.4	100	82.353	Poecilia_mexicana
ENSAOCG00000020491	si:dkey-13a21.4	100	80.882	ENSPREG00000022241	si:dkey-13a21.4	100	80.882	Poecilia_reticulata
ENSAOCG00000020491	si:dkey-13a21.4	100	86.765	ENSPNYG00000018613	si:dkey-13a21.4	99	86.765	Pundamilia_nyererei
ENSAOCG00000020491	si:dkey-13a21.4	100	45.238	YML001W	YPT7	100	45.238	Saccharomyces_cerevisiae
ENSAOCG00000020491	si:dkey-13a21.4	96	63.776	ENSSFOG00015009566	si:dkey-13a21.4	96	63.776	Scleropages_formosus
ENSAOCG00000020491	si:dkey-13a21.4	97	84.848	ENSSMAG00000013945	si:dkey-13a21.4	96	84.848	Scophthalmus_maximus
ENSAOCG00000020491	si:dkey-13a21.4	100	87.255	ENSSDUG00000019738	si:dkey-13a21.4	100	87.255	Seriola_dumerili
ENSAOCG00000020491	si:dkey-13a21.4	100	88.235	ENSSLDG00000011597	si:dkey-13a21.4	100	88.235	Seriola_lalandi_dorsalis
ENSAOCG00000020491	si:dkey-13a21.4	96	50.769	ENSXETG00000014257	mgc75872	97	50.769	Xenopus_tropicalis