EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000020559 (Gene tree)
Gene ID: 111563977
Gene Symbol: opa1
Alias: fk62d06|wu:fb77a10|wu:fk62d06|zgc:92092
Full Name: OPA1%2C mitochondrial dynamin like GTPase
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 39251 bases
Position: chrNXFZ01006294.1:162129-201379
Accession: 111563977
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000029850	MMR_HSR1	PF01926.23	3.1e-05	1	1
ENSAOCP00000015636	MMR_HSR1	PF01926.23	3.4e-05	1	1
ENSAOCP00000015657	MMR_HSR1	PF01926.23	3.8e-05	1	1
ENSAOCP00000029892	MMR_HSR1	PF01926.23	4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000024356	-	5531	XM_023263277	ENSAOCP00000015636	984 (aa)	XP_023119045	UPI000C301FD9
ENSAOCT00000031937	-	2778	-	ENSAOCP00000029850	925 (aa)	-	-
ENSAOCT00000024398	-	5687	XM_023263274	ENSAOCP00000029892	1036 (aa)	XP_023119042	UPI000C31407A
ENSAOCT00000024370	-	5633	XM_023263276	ENSAOCP00000015657	1018 (aa)	XP_023119044	UPI000C308251

Gene Model

Click here to download ENSAOCG00000020559's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000020559's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000020559	opa1	100	99.187	ENSAPOG00000011980	opa1	100	99.187	Acanthochromis_polyacanthus
ENSAOCG00000020559	opa1	99	94.902	ENSACIG00000012521	opa1	97	96.845	Amphilophus_citrinellus
ENSAOCG00000020559	opa1	100	99.898	ENSAPEG00000001641	opa1	100	99.898	Amphiprion_percula
ENSAOCG00000020559	opa1	100	90.872	ENSAMXG00000012295	opa1	100	95.089	Astyanax_mexicanus
ENSAOCG00000020559	opa1	92	51.469	WBGene00001134	eat-3	90	52.721	Caenorhabditis_elegans
ENSAOCG00000020559	opa1	98	88.596	ENSCSEG00000014266	opa1	97	88.596	Cynoglossus_semilaevis
ENSAOCG00000020559	opa1	98	96.589	ENSCVAG00000002438	opa1	100	93.822	Cyprinodon_variegatus
ENSAOCG00000020559	opa1	100	89.148	ENSDARG00000070801	opa1	100	95.376	Danio_rerio
ENSAOCG00000020559	opa1	93	54.605	FBgn0261276	Opa1	90	55.317	Drosophila_melanogaster
ENSAOCG00000020559	opa1	98	90.849	ENSFHEG00000003616	opa1	97	96.350	Fundulus_heteroclitus
ENSAOCG00000020559	opa1	100	94.207	ENSGACG00000009278	opa1	100	94.207	Gasterosteus_aculeatus
ENSAOCG00000020559	opa1	98	93.465	ENSHBUG00000005897	opa1	100	93.465	Haplochromis_burtoni
ENSAOCG00000020559	opa1	100	94.004	ENSHCOG00000016756	opa1	99	97.074	Hippocampus_comes
ENSAOCG00000020559	opa1	81	94.954	ENSKMAG00000009415	opa1	96	94.954	Kryptolebias_marmoratus
ENSAOCG00000020559	opa1	98	89.805	ENSMMOG00000008891	opa1	95	93.333	Mola_mola
ENSAOCG00000020559	opa1	100	94.004	ENSMALG00000016968	opa1	100	94.004	Monopterus_albus
ENSAOCG00000020559	opa1	99	94.589	ENSNBRG00000020394	opa1	98	96.438	Neolamprologus_brichardi
ENSAOCG00000020559	opa1	98	91.393	ENSPKIG00000003379	opa1	99	91.645	Paramormyrops_kingsleyae
ENSAOCG00000020559	opa1	100	75.904	ENSPKIG00000006473	OPA1	99	82.965	Paramormyrops_kingsleyae
ENSAOCG00000020559	opa1	99	94.264	ENSPNYG00000021747	opa1	98	96.301	Pundamilia_nyererei
ENSAOCG00000020559	opa1	100	90.872	ENSPNAG00000001917	opa1	98	95.244	Pygocentrus_nattereri
ENSAOCG00000020559	opa1	98	81.427	ENSSFOG00015009303	OPA1	97	80.893	Scleropages_formosus
ENSAOCG00000020559	opa1	96	94.927	ENSSMAG00000001797	opa1	97	95.640	Scophthalmus_maximus
ENSAOCG00000020559	opa1	75	95.074	ENSSDUG00000004968	opa1	99	95.074	Seriola_dumerili
ENSAOCG00000020559	opa1	100	96.758	ENSSLDG00000011089	opa1	100	96.758	Seriola_lalandi_dorsalis
ENSAOCG00000020559	opa1	100	98.577	ENSSPAG00000018388	opa1	100	98.577	Stegastes_partitus
ENSAOCG00000020559	opa1	78	91.946	ENSXCOG00000003267	opa1	92	91.946	Xiphophorus_couchianus
ENSAOCG00000020559	opa1	79	95.777	ENSXMAG00000005593	opa1	99	95.257	Xiphophorus_maculatus