EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000020623 (Gene tree)
Gene ID: 111581064
Gene Symbol: tdrkh
Alias: TDRD2|zgc:113056
Full Name: tudor and KH domain containing
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 17064 bases
Position: chrNXFZ01001335.1:49415-66478
Accession: 111581064
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000015781	KH_1	PF00013.29	7.8e-16	1	1
ENSAOCP00000029951	KH_1	PF00013.29	8e-16	1	1
ENSAOCP00000029951	TUDOR	PF00567.24	7.3e-27	1	1
ENSAOCP00000015781	TUDOR	PF00567.24	7.4e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000032007	-	2479	XM_023289061	ENSAOCP00000015781	558 (aa)	XP_023144829	UPI000C301655
ENSAOCT00000024534	-	1644	-	ENSAOCP00000029951	547 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000020623's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000020623's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000020623	tdrkh	100	96.595	ENSAPOG00000012653	tdrkh	100	96.595	Acanthochromis_polyacanthus
ENSAOCG00000020623	tdrkh	97	79.815	ENSACIG00000010318	tdrkh	98	79.444	Amphilophus_citrinellus
ENSAOCG00000020623	tdrkh	100	99.642	ENSAPEG00000018388	tdrkh	100	99.642	Amphiprion_percula
ENSAOCG00000020623	tdrkh	100	83.871	ENSATEG00000023809	tdrkh	100	83.871	Anabas_testudineus
ENSAOCG00000020623	tdrkh	100	79.211	ENSACLG00000003017	tdrkh	100	78.674	Astatotilapia_calliptera
ENSAOCG00000020623	tdrkh	99	62.032	ENSAMXG00000011664	tdrkh	96	61.470	Astyanax_mexicanus
ENSAOCG00000020623	tdrkh	100	70.357	ENSCSEG00000002894	tdrkh	99	70.357	Cynoglossus_semilaevis
ENSAOCG00000020623	tdrkh	61	81.863	ENSCVAG00000020347	tdrkh	78	81.863	Cyprinodon_variegatus
ENSAOCG00000020623	tdrkh	99	62.254	ENSDARG00000053474	tdrkh	97	62.254	Danio_rerio
ENSAOCG00000020623	tdrkh	100	66.726	ENSELUG00000024537	tdrkh	97	64.652	Esox_lucius
ENSAOCG00000020623	tdrkh	100	76.165	ENSFHEG00000003544	tdrkh	100	75.090	Fundulus_heteroclitus
ENSAOCG00000020623	tdrkh	100	64.769	ENSGMOG00000009304	tdrkh	97	65.328	Gadus_morhua
ENSAOCG00000020623	tdrkh	100	71.685	ENSGAFG00000010754	tdrkh	100	70.251	Gambusia_affinis
ENSAOCG00000020623	tdrkh	100	74.377	ENSGACG00000015258	tdrkh	97	75.045	Gasterosteus_aculeatus
ENSAOCG00000020623	tdrkh	100	78.853	ENSHBUG00000017609	tdrkh	100	78.315	Haplochromis_burtoni
ENSAOCG00000020623	tdrkh	99	61.964	ENSIPUG00000009673	tdrkh	99	61.607	Ictalurus_punctatus
ENSAOCG00000020623	tdrkh	100	76.703	ENSKMAG00000016638	tdrkh	93	76.703	Kryptolebias_marmoratus
ENSAOCG00000020623	tdrkh	100	81.004	ENSLBEG00000027323	tdrkh	97	79.928	Labrus_bergylta
ENSAOCG00000020623	tdrkh	99	51.499	ENSLOCG00000011381	tdrkh	99	51.332	Lepisosteus_oculatus
ENSAOCG00000020623	tdrkh	100	80.645	ENSMAMG00000020343	tdrkh	100	80.645	Mastacembelus_armatus
ENSAOCG00000020623	tdrkh	100	79.211	ENSMZEG00005006755	tdrkh	100	78.674	Maylandia_zebra
ENSAOCG00000020623	tdrkh	99	74.211	ENSMMOG00000020663	tdrkh	96	74.211	Mola_mola
ENSAOCG00000020623	tdrkh	100	78.674	ENSMALG00000015401	tdrkh	100	77.240	Monopterus_albus
ENSAOCG00000020623	tdrkh	100	75.806	ENSNBRG00000023815	tdrkh	100	75.806	Neolamprologus_brichardi
ENSAOCG00000020623	tdrkh	100	71.864	ENSORLG00000029204	tdrkh	99	71.326	Oryzias_latipes
ENSAOCG00000020623	tdrkh	96	70.467	ENSORLG00020016168	tdrkh	99	70.577	Oryzias_latipes_hni
ENSAOCG00000020623	tdrkh	100	68.280	ENSORLG00015014094	tdrkh	97	71.429	Oryzias_latipes_hsok
ENSAOCG00000020623	tdrkh	100	72.581	ENSOMEG00000015063	tdrkh	92	71.326	Oryzias_melastigma
ENSAOCG00000020623	tdrkh	100	59.220	ENSPKIG00000017597	tdrkh	100	59.043	Paramormyrops_kingsleyae
ENSAOCG00000020623	tdrkh	100	68.972	ENSPMGG00000019362	tdrkh	100	68.972	Periophthalmus_magnuspinnatus
ENSAOCG00000020623	tdrkh	100	71.864	ENSPFOG00000013032	tdrkh	97	68.905	Poecilia_formosa
ENSAOCG00000020623	tdrkh	100	72.043	ENSPLAG00000004193	tdrkh	100	70.609	Poecilia_latipinna
ENSAOCG00000020623	tdrkh	100	71.864	ENSPMEG00000016502	tdrkh	100	70.430	Poecilia_mexicana
ENSAOCG00000020623	tdrkh	100	70.609	ENSPREG00000004213	tdrkh	97	67.908	Poecilia_reticulata
ENSAOCG00000020623	tdrkh	97	78.519	ENSPNYG00000022818	tdrkh	97	77.963	Pundamilia_nyererei
ENSAOCG00000020623	tdrkh	99	62.456	ENSPNAG00000008783	tdrkh	97	61.634	Pygocentrus_nattereri
ENSAOCG00000020623	tdrkh	100	54.804	ENSSFOG00015001048	tdrkh	100	54.386	Scleropages_formosus
ENSAOCG00000020623	tdrkh	100	82.299	ENSSMAG00000001532	tdrkh	100	82.290	Scophthalmus_maximus
ENSAOCG00000020623	tdrkh	100	82.124	ENSSDUG00000013393	tdrkh	100	82.655	Seriola_dumerili
ENSAOCG00000020623	tdrkh	100	82.655	ENSSLDG00000017418	tdrkh	100	82.655	Seriola_lalandi_dorsalis
ENSAOCG00000020623	tdrkh	100	92.832	ENSSPAG00000006435	tdrkh	95	92.832	Stegastes_partitus
ENSAOCG00000020623	tdrkh	97	72.037	ENSTRUG00000006644	tdrkh	97	72.037	Takifugu_rubripes
ENSAOCG00000020623	tdrkh	99	70.053	ENSTNIG00000003157	tdrkh	99	70.053	Tetraodon_nigroviridis
ENSAOCG00000020623	tdrkh	88	83.562	ENSXCOG00000016972	tdrkh	98	87.037	Xiphophorus_couchianus
ENSAOCG00000020623	tdrkh	100	69.713	ENSXMAG00000014756	tdrkh	100	68.280	Xiphophorus_maculatus