EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000020741 (Gene tree)
Gene ID: 111583311
Gene Symbol: -
Alias: -
Full Name: pentatricopeptide repeat-containing protein 1%2C mitochondrial-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 16216 bases
Position: chrNXFZ01004059.1:926-17141
Accession: 111583311
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000030058	PPR	PF01535.20	2.1e-13	1	2
ENSAOCP00000030058	PPR	PF01535.20	2.1e-13	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000024738	-	3356	XM_023292332	ENSAOCP00000030058	700 (aa)	XP_023148100	UPI000C303699

Gene Model

Click here to download ENSAOCG00000020741's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000020741's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000020741	-	89	100.000	ENSAOCG00000022617	ptcd1	94	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000020741	-	80	48.718	ENSG00000106246	PTCD1	92	46.024	Homo_sapiens
ENSAOCG00000020741	-	81	48.635	ENSG00000248919	ATP5MF-PTCD1	86	46.024	Homo_sapiens
ENSAOCG00000020741	-	89	87.319	ENSAPOG00000010679	ptcd1	96	87.319	Acanthochromis_polyacanthus
ENSAOCG00000020741	-	91	47.085	ENSAMEG00000006224	-	87	47.085	Ailuropoda_melanoleuca
ENSAOCG00000020741	-	93	70.827	ENSACIG00000017861	ptcd1	97	70.827	Amphilophus_citrinellus
ENSAOCG00000020741	-	100	99.000	ENSAPEG00000022632	ptcd1	100	99.000	Amphiprion_percula
ENSAOCG00000020741	-	99	67.413	ENSATEG00000007016	ptcd1	99	67.832	Anabas_testudineus
ENSAOCG00000020741	-	82	47.154	ENSAPLG00000006862	-	98	46.708	Anas_platyrhynchos
ENSAOCG00000020741	-	86	46.349	ENSACAG00000012871	-	83	46.349	Anolis_carolinensis
ENSAOCG00000020741	-	80	49.073	ENSANAG00000035790	-	86	48.744	Aotus_nancymaae
ENSAOCG00000020741	-	99	67.932	ENSACLG00000002824	ptcd1	99	67.932	Astatotilapia_calliptera
ENSAOCG00000020741	-	82	51.212	ENSAMXG00000037292	ptcd1	87	51.452	Astyanax_mexicanus
ENSAOCG00000020741	-	88	46.130	ENSBTAG00000020440	-	79	46.512	Bos_taurus
ENSAOCG00000020741	-	81	49.236	ENSCJAG00000015815	-	84	48.904	Callithrix_jacchus
ENSAOCG00000020741	-	86	48.336	ENSCAFG00000015055	-	83	48.336	Canis_familiaris
ENSAOCG00000020741	-	86	48.336	ENSCAFG00020014480	-	83	48.336	Canis_lupus_dingo
ENSAOCG00000020741	-	87	48.089	ENSCHIG00000027000	-	87	48.867	Capra_hircus
ENSAOCG00000020741	-	80	49.402	ENSTSYG00000029495	-	90	46.939	Carlito_syrichta
ENSAOCG00000020741	-	91	45.495	ENSCAPG00000014660	-	99	45.495	Cavia_aperea
ENSAOCG00000020741	-	92	45.630	ENSCPOG00000001780	-	94	45.630	Cavia_porcellus
ENSAOCG00000020741	-	81	48.739	ENSCCAG00000034025	-	84	48.414	Cebus_capucinus
ENSAOCG00000020741	-	84	47.720	ENSCATG00000040859	-	92	46.166	Cercocebus_atys
ENSAOCG00000020741	-	85	47.284	ENSCLAG00000006354	-	94	45.252	Chinchilla_lanigera
ENSAOCG00000020741	-	77	48.122	ENSCSAG00000017794	-	88	46.231	Chlorocebus_sabaeus
ENSAOCG00000020741	-	84	46.384	ENSCPBG00000020866	-	85	46.384	Chrysemys_picta_bellii
ENSAOCG00000020741	-	89	46.626	ENSCANG00000023441	-	92	46.626	Colobus_angolensis_palliatus
ENSAOCG00000020741	-	89	46.296	ENSCGRG00001023686	Ptcd1	92	46.533	Cricetulus_griseus_chok1gshd
ENSAOCG00000020741	-	88	46.468	ENSCGRG00000015031	Ptcd1	90	46.708	Cricetulus_griseus_crigri
ENSAOCG00000020741	-	94	58.590	ENSCSEG00000002378	ptcd1	93	59.031	Cynoglossus_semilaevis
ENSAOCG00000020741	-	99	65.722	ENSCVAG00000015826	ptcd1	99	65.722	Cyprinodon_variegatus
ENSAOCG00000020741	-	93	67.228	ENSCVAG00000003621	ptcd1	98	66.768	Cyprinodon_variegatus
ENSAOCG00000020741	-	82	52.658	ENSDARG00000076176	ptcd1	86	52.658	Danio_rerio
ENSAOCG00000020741	-	81	48.485	ENSDNOG00000009957	-	83	48.576	Dasypus_novemcinctus
ENSAOCG00000020741	-	81	48.649	ENSDORG00000000740	Ptcd1	88	47.705	Dipodomys_ordii
ENSAOCG00000020741	-	68	49.660	ENSEBUG00000014515	ptcd1	93	49.660	Eptatretus_burgeri
ENSAOCG00000020741	-	88	47.188	ENSEASG00005002480	-	90	47.582	Equus_asinus_asinus
ENSAOCG00000020741	-	88	47.141	ENSECAG00000016617	-	92	46.960	Equus_caballus
ENSAOCG00000020741	-	86	55.937	ENSELUG00000016517	ptcd1	86	55.937	Esox_lucius
ENSAOCG00000020741	-	86	47.854	ENSFCAG00000015069	-	88	48.177	Felis_catus
ENSAOCG00000020741	-	80	48.567	ENSFALG00000013803	-	90	46.319	Ficedula_albicollis
ENSAOCG00000020741	-	91	46.777	ENSFDAG00000006393	-	92	46.777	Fukomys_damarensis
ENSAOCG00000020741	-	79	67.921	ENSFHEG00000012491	ptcd1	97	67.921	Fundulus_heteroclitus
ENSAOCG00000020741	-	87	59.807	ENSGMOG00000007639	ptcd1	100	59.807	Gadus_morhua
ENSAOCG00000020741	-	80	47.148	ENSGALG00000004711	-	94	44.609	Gallus_gallus
ENSAOCG00000020741	-	98	62.536	ENSGAFG00000013175	ptcd1	98	62.894	Gambusia_affinis
ENSAOCG00000020741	-	90	69.147	ENSGACG00000016607	ptcd1	99	69.147	Gasterosteus_aculeatus
ENSAOCG00000020741	-	78	47.425	ENSGAGG00000021832	-	85	46.998	Gopherus_agassizii
ENSAOCG00000020741	-	81	48.123	ENSGGOG00000015123	-	92	45.566	Gorilla_gorilla
ENSAOCG00000020741	-	99	67.316	ENSHBUG00000018275	ptcd1	100	67.316	Haplochromis_burtoni
ENSAOCG00000020741	-	88	47.059	ENSHGLG00000017621	-	92	46.386	Heterocephalus_glaber_female
ENSAOCG00000020741	-	88	47.059	ENSHGLG00100007218	-	92	46.386	Heterocephalus_glaber_male
ENSAOCG00000020741	-	99	55.840	ENSHCOG00000010784	ptcd1	99	56.757	Hippocampus_comes
ENSAOCG00000020741	-	85	47.840	ENSSTOG00000001682	-	86	48.856	Ictidomys_tridecemlineatus
ENSAOCG00000020741	-	87	48.025	ENSJJAG00000000319	Ptcd1	90	48.025	Jaculus_jaculus
ENSAOCG00000020741	-	94	66.172	ENSKMAG00000008708	ptcd1	95	66.617	Kryptolebias_marmoratus
ENSAOCG00000020741	-	99	64.196	ENSLBEG00000008061	ptcd1	99	64.196	Labrus_bergylta
ENSAOCG00000020741	-	83	48.760	ENSLACG00000011172	ptcd1	85	49.172	Latimeria_chalumnae
ENSAOCG00000020741	-	80	53.488	ENSLOCG00000004833	ptcd1	91	53.184	Lepisosteus_oculatus
ENSAOCG00000020741	-	84	47.488	ENSLAFG00000002588	-	92	45.701	Loxodonta_africana
ENSAOCG00000020741	-	84	47.883	ENSMFAG00000041324	-	92	46.319	Macaca_fascicularis
ENSAOCG00000020741	-	84	47.883	ENSMMUG00000030408	-	92	46.319	Macaca_mulatta
ENSAOCG00000020741	-	84	47.883	ENSMNEG00000043786	-	92	46.319	Macaca_nemestrina
ENSAOCG00000020741	-	84	36.755	ENSMLEG00000031179	-	86	37.520	Mandrillus_leucophaeus
ENSAOCG00000020741	-	95	66.862	ENSMAMG00000007623	ptcd1	95	66.862	Mastacembelus_armatus
ENSAOCG00000020741	-	99	67.792	ENSMZEG00005012722	ptcd1	99	67.792	Maylandia_zebra
ENSAOCG00000020741	-	83	46.290	ENSMGAG00000004211	-	80	46.452	Meleagris_gallopavo
ENSAOCG00000020741	-	85	46.104	ENSMICG00000017428	-	88	46.104	Microcebus_murinus
ENSAOCG00000020741	-	100	67.639	ENSMMOG00000020243	ptcd1	99	67.639	Mola_mola
ENSAOCG00000020741	-	81	47.508	ENSMODG00000001350	-	81	47.508	Monodelphis_domestica
ENSAOCG00000020741	-	96	69.565	ENSMALG00000018442	ptcd1	99	68.150	Monopterus_albus
ENSAOCG00000020741	-	83	47.098	MGP_CAROLIEiJ_G0028011	Ptcd1	85	46.612	Mus_caroli
ENSAOCG00000020741	-	83	46.434	ENSMUSG00000029624	Ptcd1	85	46.667	Mus_musculus
ENSAOCG00000020741	-	90	45.441	MGP_PahariEiJ_G0024580	Ptcd1	93	45.441	Mus_pahari
ENSAOCG00000020741	-	83	46.434	MGP_SPRETEiJ_G0029012	Ptcd1	85	46.689	Mus_spretus
ENSAOCG00000020741	-	88	47.278	ENSMPUG00000016518	-	90	48.142	Mustela_putorius_furo
ENSAOCG00000020741	-	84	48.293	ENSMLUG00000010994	-	88	46.557	Myotis_lucifugus
ENSAOCG00000020741	-	98	65.861	ENSNBRG00000010079	ptcd1	96	68.852	Neolamprologus_brichardi
ENSAOCG00000020741	-	72	47.519	ENSNLEG00000011060	-	87	47.519	Nomascus_leucogenys
ENSAOCG00000020741	-	81	47.723	ENSMEUG00000006930	-	84	47.723	Notamacropus_eugenii
ENSAOCG00000020741	-	74	51.095	ENSOPRG00000013647	-	78	50.685	Ochotona_princeps
ENSAOCG00000020741	-	84	70.266	ENSONIG00000003168	ptcd1	99	70.266	Oreochromis_niloticus
ENSAOCG00000020741	-	89	44.838	ENSOANG00000007728	-	80	45.687	Ornithorhynchus_anatinus
ENSAOCG00000020741	-	90	46.483	ENSOCUG00000010584	-	90	46.483	Oryctolagus_cuniculus
ENSAOCG00000020741	-	99	62.894	ENSORLG00000009275	ptcd1	99	62.894	Oryzias_latipes
ENSAOCG00000020741	-	97	63.650	ENSORLG00020000988	ptcd1	99	63.650	Oryzias_latipes_hni
ENSAOCG00000020741	-	97	63.411	ENSORLG00015010557	ptcd1	99	63.411	Oryzias_latipes_hsok
ENSAOCG00000020741	-	96	65.000	ENSOMEG00000020627	ptcd1	99	65.000	Oryzias_melastigma
ENSAOCG00000020741	-	82	46.434	ENSOGAG00000010877	-	84	46.801	Otolemur_garnettii
ENSAOCG00000020741	-	87	44.833	ENSOARG00000018676	-	89	44.992	Ovis_aries
ENSAOCG00000020741	-	81	48.635	ENSPPAG00000036024	-	92	46.107	Pan_paniscus
ENSAOCG00000020741	-	87	48.031	ENSPPRG00000003478	-	90	48.031	Panthera_pardus
ENSAOCG00000020741	-	81	48.805	ENSPTRG00000019452	-	92	46.177	Pan_troglodytes
ENSAOCG00000020741	-	84	48.046	ENSPANG00000016730	-	92	46.472	Papio_anubis
ENSAOCG00000020741	-	85	50.325	ENSPKIG00000014215	ptcd1	89	50.487	Paramormyrops_kingsleyae
ENSAOCG00000020741	-	80	47.863	ENSPSIG00000011184	-	98	47.863	Pelodiscus_sinensis
ENSAOCG00000020741	-	71	39.171	ENSPMAG00000009667	ptcd1	100	39.171	Petromyzon_marinus
ENSAOCG00000020741	-	85	45.031	ENSPCIG00000024778	-	86	45.031	Phascolarctos_cinereus
ENSAOCG00000020741	-	98	61.506	ENSPFOG00000004458	ptcd1	98	62.571	Poecilia_formosa
ENSAOCG00000020741	-	98	61.638	ENSPLAG00000011051	ptcd1	98	62.356	Poecilia_latipinna
ENSAOCG00000020741	-	98	62.589	ENSPMEG00000020547	ptcd1	98	62.947	Poecilia_mexicana
ENSAOCG00000020741	-	98	61.693	ENSPREG00000000059	ptcd1	98	61.980	Poecilia_reticulata
ENSAOCG00000020741	-	85	46.805	ENSPPYG00000017377	-	93	46.805	Pongo_abelii
ENSAOCG00000020741	-	71	55.556	ENSPCAG00000001852	-	80	55.556	Procavia_capensis
ENSAOCG00000020741	-	82	47.804	ENSPCOG00000018596	-	86	47.117	Propithecus_coquereli
ENSAOCG00000020741	-	57	52.131	ENSPVAG00000007529	-	63	52.131	Pteropus_vampyrus
ENSAOCG00000020741	-	99	67.511	ENSPNYG00000019993	ptcd1	99	67.511	Pundamilia_nyererei
ENSAOCG00000020741	-	88	51.094	ENSPNAG00000014931	ptcd1	92	52.031	Pygocentrus_nattereri
ENSAOCG00000020741	-	84	47.204	ENSRNOG00000000987	Ptcd1	88	47.204	Rattus_norvegicus
ENSAOCG00000020741	-	93	45.147	ENSRBIG00000043393	-	96	45.147	Rhinopithecus_bieti
ENSAOCG00000020741	-	93	45.534	ENSRROG00000036420	-	96	45.534	Rhinopithecus_roxellana
ENSAOCG00000020741	-	81	49.066	ENSSBOG00000024114	-	84	48.735	Saimiri_boliviensis_boliviensis
ENSAOCG00000020741	-	85	45.683	ENSSHAG00000011376	-	89	48.718	Sarcophilus_harrisii
ENSAOCG00000020741	-	84	52.606	ENSSFOG00015007909	ptcd1	83	52.769	Scleropages_formosus
ENSAOCG00000020741	-	88	64.308	ENSSMAG00000000218	ptcd1	99	64.623	Scophthalmus_maximus
ENSAOCG00000020741	-	94	69.379	ENSSDUG00000015671	ptcd1	98	69.379	Seriola_dumerili
ENSAOCG00000020741	-	93	69.436	ENSSLDG00000014261	ptcd1	96	69.436	Seriola_lalandi_dorsalis
ENSAOCG00000020741	-	85	46.468	ENSSPUG00000003540	-	86	46.468	Sphenodon_punctatus
ENSAOCG00000020741	-	100	75.762	ENSSPAG00000011049	ptcd1	100	75.900	Stegastes_partitus
ENSAOCG00000020741	-	81	50.171	ENSSSCG00000007622	-	95	47.943	Sus_scrofa
ENSAOCG00000020741	-	80	47.917	ENSTGUG00000007563	-	94	47.917	Taeniopygia_guttata
ENSAOCG00000020741	-	96	64.069	ENSTRUG00000013471	ptcd1	99	62.709	Takifugu_rubripes
ENSAOCG00000020741	-	94	63.964	ENSTNIG00000008271	ptcd1	97	63.964	Tetraodon_nigroviridis
ENSAOCG00000020741	-	84	47.394	ENSTBEG00000011021	-	87	47.394	Tupaia_belangeri
ENSAOCG00000020741	-	82	47.941	ENSTTRG00000003006	-	85	47.941	Tursiops_truncatus
ENSAOCG00000020741	-	83	48.099	ENSUAMG00000008049	-	90	46.967	Ursus_americanus
ENSAOCG00000020741	-	86	48.811	ENSVVUG00000008836	-	89	48.811	Vulpes_vulpes
ENSAOCG00000020741	-	91	45.191	ENSXETG00000009891	ptcd1	92	45.191	Xenopus_tropicalis
ENSAOCG00000020741	-	98	62.984	ENSXMAG00000015540	ptcd1	98	63.415	Xiphophorus_maculatus