EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000020938 (Gene tree)
Gene ID: 111569127
Gene Symbol: rbfox1l
Alias: Fox-1|ZFmu1A11s|a2bp1l|hm:zeh0082|zeh0082
Full Name: RNA binding protein fox-1 homolog 1-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 12273 bases
Position: chrNXFZ01002292.1:49631-61903
Accession: 111569127
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000016042	Fox-1_C	PF12414.8	2e-18	1	2
ENSAOCP00000016042	Fox-1_C	PF12414.8	2e-18	2	2
ENSAOCP00000016042	RRM_1	PF00076.22	7.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000024922	-	960	XM_023271105	ENSAOCP00000016042	319 (aa)	XP_023126873	-

Gene Model

Click here to download ENSAOCG00000020938's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000020938's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000020938	rbfox1l	96	55.519	ENSAOCG00000010786	-	57	72.350
ENSAOCG00000020938	rbfox1l	70	60.784	ENSAOCG00000013752	rbfox2	56	60.938
ENSAOCG00000020938	rbfox1l	70	57.795	ENSAOCG00000015358	-	65	60.076
ENSAOCG00000020938	rbfox1l	96	55.692	ENSAOCG00000012358	rbfox3b	78	57.191

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000020938	rbfox1l	96	93.827	ENSAPOG00000016304	rbfox1l	86	93.827	Acanthochromis_polyacanthus
ENSAOCG00000020938	rbfox1l	94	79.344	ENSACIG00000006441	rbfox1l	87	82.298	Amphilophus_citrinellus
ENSAOCG00000020938	rbfox1l	100	99.687	ENSAPEG00000008232	rbfox1l	88	99.687	Amphiprion_percula
ENSAOCG00000020938	rbfox1l	94	85.443	ENSATEG00000022649	rbfox1l	83	87.580	Anabas_testudineus
ENSAOCG00000020938	rbfox1l	72	68.924	ENSACAG00000011931	-	89	70.445	Anolis_carolinensis
ENSAOCG00000020938	rbfox1l	99	83.680	ENSACLG00000021394	rbfox1l	83	84.906	Astatotilapia_calliptera
ENSAOCG00000020938	rbfox1l	94	80.062	ENSAMXG00000010470	rbfox1l	83	82.555	Astyanax_mexicanus
ENSAOCG00000020938	rbfox1l	73	66.135	ENSCPBG00000010944	-	64	69.672	Chrysemys_picta_bellii
ENSAOCG00000020938	rbfox1l	99	81.361	ENSCSEG00000018898	rbfox1l	88	81.065	Cynoglossus_semilaevis
ENSAOCG00000020938	rbfox1l	99	85.970	ENSCVAG00000007986	rbfox1l	88	85.970	Cyprinodon_variegatus
ENSAOCG00000020938	rbfox1l	93	78.683	ENSDARG00000021184	rbfox1l	83	79.128	Danio_rerio
ENSAOCG00000020938	rbfox1l	99	77.746	ENSELUG00000015077	rbfox1l	86	79.878	Esox_lucius
ENSAOCG00000020938	rbfox1l	99	69.062	ENSFHEG00000016557	rbfox1l	85	67.812	Fundulus_heteroclitus
ENSAOCG00000020938	rbfox1l	100	82.249	ENSGMOG00000005040	rbfox1l	88	81.361	Gadus_morhua
ENSAOCG00000020938	rbfox1l	99	85.757	ENSGAFG00000013211	rbfox1l	93	85.757	Gambusia_affinis
ENSAOCG00000020938	rbfox1l	100	84.911	ENSGACG00000010757	rbfox1l	88	85.503	Gasterosteus_aculeatus
ENSAOCG00000020938	rbfox1l	83	61.888	ENSGAGG00000012440	-	84	70.082	Gopherus_agassizii
ENSAOCG00000020938	rbfox1l	94	82.812	ENSHBUG00000013406	rbfox1l	83	84.906	Haplochromis_burtoni
ENSAOCG00000020938	rbfox1l	99	78.994	ENSHCOG00000020771	rbfox1l	86	81.191	Hippocampus_comes
ENSAOCG00000020938	rbfox1l	93	78.056	ENSIPUG00000000065	rbfox1l	95	78.006	Ictalurus_punctatus
ENSAOCG00000020938	rbfox1l	92	85.256	ENSKMAG00000005146	rbfox1l	83	85.580	Kryptolebias_marmoratus
ENSAOCG00000020938	rbfox1l	99	86.053	ENSLBEG00000017089	rbfox1l	83	86.792	Labrus_bergylta
ENSAOCG00000020938	rbfox1l	94	84.906	ENSMAMG00000019480	rbfox1l	83	85.849	Mastacembelus_armatus
ENSAOCG00000020938	rbfox1l	94	82.812	ENSMZEG00005016374	rbfox1l	83	84.906	Maylandia_zebra
ENSAOCG00000020938	rbfox1l	99	83.086	ENSMMOG00000016530	rbfox1l	88	83.680	Mola_mola
ENSAOCG00000020938	rbfox1l	99	83.234	ENSMALG00000009384	rbfox1l	86	85.535	Monopterus_albus
ENSAOCG00000020938	rbfox1l	94	81.562	ENSNBRG00000003346	rbfox1l	83	83.648	Neolamprologus_brichardi
ENSAOCG00000020938	rbfox1l	94	83.438	ENSONIG00000012754	rbfox1l	83	85.535	Oreochromis_niloticus
ENSAOCG00000020938	rbfox1l	97	85.366	ENSORLG00000011269	rbfox1l	88	85.928	Oryzias_latipes
ENSAOCG00000020938	rbfox1l	97	85.976	ENSORLG00020000162	rbfox1l	91	86.527	Oryzias_latipes_hni
ENSAOCG00000020938	rbfox1l	97	85.671	ENSORLG00015013464	rbfox1l	88	86.228	Oryzias_latipes_hsok
ENSAOCG00000020938	rbfox1l	97	87.462	ENSOMEG00000010584	rbfox1l	88	88.024	Oryzias_melastigma
ENSAOCG00000020938	rbfox1l	94	80.878	ENSPKIG00000012029	rbfox1l	88	80.702	Paramormyrops_kingsleyae
ENSAOCG00000020938	rbfox1l	99	77.976	ENSPMGG00000012082	rbfox1l	88	77.083	Periophthalmus_magnuspinnatus
ENSAOCG00000020938	rbfox1l	99	86.647	ENSPFOG00000009338	rbfox1l	83	86.164	Poecilia_formosa
ENSAOCG00000020938	rbfox1l	96	80.892	ENSPLAG00000012816	rbfox1l	92	80.000	Poecilia_latipinna
ENSAOCG00000020938	rbfox1l	99	91.250	ENSPMEG00000017597	rbfox1l	82	91.030	Poecilia_mexicana
ENSAOCG00000020938	rbfox1l	99	90.625	ENSPREG00000007940	rbfox1l	87	90.312	Poecilia_reticulata
ENSAOCG00000020938	rbfox1l	94	82.500	ENSPNYG00000002098	rbfox1l	83	84.591	Pundamilia_nyererei
ENSAOCG00000020938	rbfox1l	94	81.366	ENSPNAG00000001620	rbfox1l	88	81.818	Pygocentrus_nattereri
ENSAOCG00000020938	rbfox1l	96	75.229	ENSSFOG00015000675	rbfox1l	88	77.876	Scleropages_formosus
ENSAOCG00000020938	rbfox1l	100	84.911	ENSSMAG00000013090	rbfox1l	91	85.799	Scophthalmus_maximus
ENSAOCG00000020938	rbfox1l	94	82.822	ENSSDUG00000008705	rbfox1l	83	85.802	Seriola_dumerili
ENSAOCG00000020938	rbfox1l	94	83.077	ENSSLDG00000022256	rbfox1l	83	86.378	Seriola_lalandi_dorsalis
ENSAOCG00000020938	rbfox1l	99	96.226	ENSSPAG00000016620	rbfox1l	87	96.226	Stegastes_partitus
ENSAOCG00000020938	rbfox1l	95	80.495	ENSTRUG00000015905	rbfox1l	87	80.247	Takifugu_rubripes
ENSAOCG00000020938	rbfox1l	72	77.528	ENSTNIG00000008088	rbfox1l	97	79.008	Tetraodon_nigroviridis
ENSAOCG00000020938	rbfox1l	99	85.757	ENSXMAG00000023471	rbfox1l	88	86.053	Xiphophorus_maculatus