EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000020947 (Gene tree)
Gene ID: 111588374
Gene Symbol: gar1
Alias: nola1|zgc:56086
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 4402 bases
Position: chrNXFZ01005968.1:456811-461212
Accession: 111588374
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000016080	Gar1	PF04410.14	2.2e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000024941	-	2341	XM_023298746	ENSAOCP00000016080	214 (aa)	XP_023154514	UPI000C304DD4

Gene Model

Click here to download ENSAOCG00000020947's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000020947's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000020947	gar1	50	100.000	ENSAPOG00000019754	gar1	51	100.000	Acanthochromis_polyacanthus
ENSAOCG00000020947	gar1	50	93.458	ENSAMEG00000004605	GAR1	52	93.458	Ailuropoda_melanoleuca
ENSAOCG00000020947	gar1	100	100.000	ENSAPEG00000001676	gar1	100	100.000	Amphiprion_percula
ENSAOCG00000020947	gar1	50	99.074	ENSATEG00000003733	gar1	50	99.074	Anabas_testudineus
ENSAOCG00000020947	gar1	50	89.623	ENSAPLG00000010926	GAR1	59	89.623	Anas_platyrhynchos
ENSAOCG00000020947	gar1	50	92.453	ENSACAG00000010031	GAR1	50	92.453	Anolis_carolinensis
ENSAOCG00000020947	gar1	50	94.393	ENSBTAG00000000748	GAR1	51	94.393	Bos_taurus
ENSAOCG00000020947	gar1	50	94.393	ENSCHIG00000016026	-	68	85.517	Capra_hircus
ENSAOCG00000020947	gar1	50	85.981	ENSTSYG00000026632	-	55	85.981	Carlito_syrichta
ENSAOCG00000020947	gar1	50	94.393	ENSTSYG00000013668	-	50	94.393	Carlito_syrichta
ENSAOCG00000020947	gar1	51	92.727	ENSCATG00000021854	GAR1	54	94.393	Cercocebus_atys
ENSAOCG00000020947	gar1	51	91.818	ENSCLAG00000005335	GAR1	69	96.364	Chinchilla_lanigera
ENSAOCG00000020947	gar1	50	92.523	ENSCSAG00000003922	GAR1	54	94.393	Chlorocebus_sabaeus
ENSAOCG00000020947	gar1	50	93.396	ENSCPBG00000004310	GAR1	54	93.396	Chrysemys_picta_bellii
ENSAOCG00000020947	gar1	50	98.148	ENSCVAG00000002103	gar1	52	98.148	Cyprinodon_variegatus
ENSAOCG00000020947	gar1	50	93.458	ENSDNOG00000037632	GAR1	54	93.458	Dasypus_novemcinctus
ENSAOCG00000020947	gar1	61	72.308	ENSEBUG00000011178	gar1	56	70.732	Eptatretus_burgeri
ENSAOCG00000020947	gar1	51	93.636	ENSEASG00005004658	GAR1	50	95.327	Equus_asinus_asinus
ENSAOCG00000020947	gar1	51	92.727	ENSECAG00000013624	GAR1	54	94.393	Equus_caballus
ENSAOCG00000020947	gar1	50	57.009	ENSFCAG00000025841	-	50	59.813	Felis_catus
ENSAOCG00000020947	gar1	50	94.393	ENSFCAG00000040791	-	51	94.393	Felis_catus
ENSAOCG00000020947	gar1	52	97.297	ENSFHEG00000008068	gar1	50	97.222	Fundulus_heteroclitus
ENSAOCG00000020947	gar1	60	91.473	ENSHGLG00000000493	GAR1	72	98.182	Heterocephalus_glaber_female
ENSAOCG00000020947	gar1	51	96.364	ENSIPUG00000003194	gar1	51	96.296	Ictalurus_punctatus
ENSAOCG00000020947	gar1	61	90.076	ENSSTOG00000005577	GAR1	71	96.364	Ictidomys_tridecemlineatus
ENSAOCG00000020947	gar1	52	95.495	ENSKMAG00000010402	gar1	51	96.296	Kryptolebias_marmoratus
ENSAOCG00000020947	gar1	50	89.623	ENSLACG00000003306	GAR1	64	89.623	Latimeria_chalumnae
ENSAOCG00000020947	gar1	50	80.556	ENSMFAG00000003572	-	52	80.374	Macaca_fascicularis
ENSAOCG00000020947	gar1	50	96.262	ENSMAUG00000016788	Gar1	96	92.105	Mesocricetus_auratus
ENSAOCG00000020947	gar1	50	95.327	ENSMOCG00000001340	Gar1	70	98.182	Microtus_ochrogaster
ENSAOCG00000020947	gar1	50	97.196	ENSMMOG00000004156	gar1	53	96.296	Mola_mola
ENSAOCG00000020947	gar1	53	87.719	ENSMODG00000005897	GAR1	67	69.182	Monodelphis_domestica
ENSAOCG00000020947	gar1	50	96.262	ENSMALG00000009672	gar1	50	95.370	Monopterus_albus
ENSAOCG00000020947	gar1	50	95.327	MGP_CAROLIEiJ_G0025627	Gar1	96	92.105	Mus_caroli
ENSAOCG00000020947	gar1	51	93.636	ENSMUSG00000028010	Gar1	96	92.105	Mus_musculus
ENSAOCG00000020947	gar1	51	93.636	MGP_PahariEiJ_G0027076	Gar1	96	92.105	Mus_pahari
ENSAOCG00000020947	gar1	51	93.636	MGP_SPRETEiJ_G0026580	Gar1	96	92.105	Mus_spretus
ENSAOCG00000020947	gar1	50	94.393	ENSMPUG00000008615	GAR1	51	94.393	Mustela_putorius_furo
ENSAOCG00000020947	gar1	50	94.393	ENSMLUG00000003776	GAR1	69	75.325	Myotis_lucifugus
ENSAOCG00000020947	gar1	51	92.727	ENSNGAG00000008268	Gar1	71	96.364	Nannospalax_galili
ENSAOCG00000020947	gar1	51	92.727	ENSNLEG00000016578	GAR1	50	94.393	Nomascus_leucogenys
ENSAOCG00000020947	gar1	50	93.458	ENSODEG00000011083	GAR1	68	81.679	Octodon_degus
ENSAOCG00000020947	gar1	50	93.396	ENSOANG00000003665	GAR1	67	76.000	Ornithorhynchus_anatinus
ENSAOCG00000020947	gar1	50	94.393	ENSOCUG00000003901	GAR1	50	94.393	Oryctolagus_cuniculus
ENSAOCG00000020947	gar1	50	98.148	ENSORLG00000020583	gar1	67	89.116	Oryzias_latipes
ENSAOCG00000020947	gar1	50	98.148	ENSORLG00020008602	gar1	67	89.116	Oryzias_latipes_hni
ENSAOCG00000020947	gar1	50	98.148	ENSORLG00015017643	gar1	67	90.411	Oryzias_latipes_hsok
ENSAOCG00000020947	gar1	60	90.698	ENSOGAG00000004693	GAR1	50	94.393	Otolemur_garnettii
ENSAOCG00000020947	gar1	50	94.393	ENSOARG00000004910	GAR1	69	85.517	Ovis_aries
ENSAOCG00000020947	gar1	50	94.393	ENSPPAG00000014081	GAR1	54	94.393	Pan_paniscus
ENSAOCG00000020947	gar1	50	94.393	ENSPPRG00000023697	GAR1	51	94.393	Panthera_pardus
ENSAOCG00000020947	gar1	50	94.393	ENSPTIG00000021565	GAR1	51	94.393	Panthera_tigris_altaica
ENSAOCG00000020947	gar1	51	92.727	ENSPTRG00000016364	GAR1	54	94.393	Pan_troglodytes
ENSAOCG00000020947	gar1	70	77.876	ENSPTRG00000049340	-	51	76.636	Pan_troglodytes
ENSAOCG00000020947	gar1	50	96.262	ENSPEMG00000015838	Gar1	96	92.105	Peromyscus_maniculatus_bairdii
ENSAOCG00000020947	gar1	50	96.296	ENSPFOG00000024155	gar1	51	96.296	Poecilia_formosa
ENSAOCG00000020947	gar1	50	96.296	ENSPLAG00000015056	gar1	51	96.296	Poecilia_latipinna
ENSAOCG00000020947	gar1	50	97.222	ENSPMEG00000009320	gar1	52	97.222	Poecilia_mexicana
ENSAOCG00000020947	gar1	50	92.523	ENSPCOG00000027049	GAR1	55	94.393	Propithecus_coquereli
ENSAOCG00000020947	gar1	50	94.393	ENSPVAG00000005992	GAR1	67	93.277	Pteropus_vampyrus
ENSAOCG00000020947	gar1	50	96.296	ENSRNOG00000061146	Gar1	63	96.262	Rattus_norvegicus
ENSAOCG00000020947	gar1	52	76.786	ENSRBIG00000042411	-	52	77.570	Rhinopithecus_bieti
ENSAOCG00000020947	gar1	50	94.393	ENSRBIG00000019547	GAR1	54	94.393	Rhinopithecus_bieti
ENSAOCG00000020947	gar1	52	76.786	ENSRROG00000044348	-	51	77.570	Rhinopithecus_roxellana
ENSAOCG00000020947	gar1	51	92.727	ENSRROG00000028454	GAR1	54	94.393	Rhinopithecus_roxellana
ENSAOCG00000020947	gar1	50	94.393	ENSSBOG00000024785	GAR1	50	94.393	Saimiri_boliviensis_boliviensis
ENSAOCG00000020947	gar1	50	96.296	ENSSMAG00000009976	gar1	50	96.296	Scophthalmus_maximus
ENSAOCG00000020947	gar1	99	92.661	ENSSDUG00000002130	gar1	89	92.661	Seriola_dumerili
ENSAOCG00000020947	gar1	50	99.074	ENSSLDG00000023264	gar1	51	99.074	Seriola_lalandi_dorsalis
ENSAOCG00000020947	gar1	50	94.340	ENSSPUG00000008707	GAR1	59	94.340	Sphenodon_punctatus
ENSAOCG00000020947	gar1	50	94.393	ENSSSCG00000009137	GAR1	53	94.393	Sus_scrofa
ENSAOCG00000020947	gar1	50	96.296	ENSTRUG00000020580	gar1	52	96.296	Takifugu_rubripes
ENSAOCG00000020947	gar1	79	96.471	ENSTNIG00000013023	gar1	95	96.471	Tetraodon_nigroviridis
ENSAOCG00000020947	gar1	50	94.393	ENSUMAG00000000776	GAR1	52	94.393	Ursus_maritimus
ENSAOCG00000020947	gar1	50	94.393	ENSVVUG00000017612	GAR1	55	94.393	Vulpes_vulpes