EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAOCG00000021529 (Gene tree)
Gene ID
111578472
Gene Symbol
pabpc4
Alias
cb12|sb:cb12
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Amphiprion_ocellaris
Status
putative
Strand
Plus strand
Length
10309 bases
Position
chrNXFZ01003332.1:259403-269711
Accession
111578472
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAOCP00000016541PABPPF00658.185.5e-3111
ENSAOCP00000016549PABPPF00658.186e-3111
ENSAOCP00000016541RRM_5PF13893.61.1e-0911
ENSAOCP00000016549RRM_5PF13893.61.4e-0911
ENSAOCP00000016541RRM_1PF00076.225.9e-9014
ENSAOCP00000016541RRM_1PF00076.225.9e-9024
ENSAOCP00000016541RRM_1PF00076.225.9e-9034
ENSAOCP00000016541RRM_1PF00076.225.9e-9044
ENSAOCP00000016549RRM_1PF00076.227.2e-9014
ENSAOCP00000016549RRM_1PF00076.227.2e-9024
ENSAOCP00000016549RRM_1PF00076.227.2e-9034
ENSAOCP00000016549RRM_1PF00076.227.2e-9044
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAOCT00000025543-3364XM_023285303ENSAOCP00000016549626 (aa)XP_023141071UPI000C30B7A4
ENSAOCT00000025577-1818-ENSAOCP00000016541605 (aa)--
Gene Model
Click here to download ENSAOCG00000021529's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000021529's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAOCG00000021529pabpc49865.293ENSAOCG00000006167-10064.976
ENSAOCG00000021529pabpc45438.636ENSAOCG00000022110-5938.636
ENSAOCG00000021529pabpc410075.351ENSAOCG00000011656pabpc1a9876.433
ENSAOCG00000021529pabpc46233.981ENSAOCG00000008301rbms2a6033.981
ENSAOCG00000021529pabpc49876.077ENSAOCG00000019839pabpc1b9975.598
ENSAOCG00000021529pabpc46236.145ENSAOCG00000019468ELAVL29136.145
ENSAOCG00000021529pabpc46136.145ENSAOCG00000005054elavl39236.145
ENSAOCG00000021529pabpc47730.220ENSAOCG00000011133-7030.220
ENSAOCG00000021529pabpc46037.500ENSAOCG00000001252celf16538.372
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAOCG00000021529pabpc410090.583ENSG00000090621PABPC49996.396Homo_sapiens
ENSAOCG00000021529pabpc410099.521ENSAPOG00000001161pabpc410099.521Acanthochromis_polyacanthus
ENSAOCG00000021529pabpc410079.970ENSAMEG00000011535-9979.697Ailuropoda_melanoleuca
ENSAOCG00000021529pabpc49850.000ENSAMEG00000015083-9849.433Ailuropoda_melanoleuca
ENSAOCG00000021529pabpc410096.355ENSACIG00000023343pabpc410096.355Amphilophus_citrinellus
ENSAOCG00000021529pabpc4100100.000ENSAPEG00000019196pabpc4100100.000Amphiprion_percula
ENSAOCG00000021529pabpc410097.767ENSATEG00000007402pabpc410097.767Anabas_testudineus
ENSAOCG00000021529pabpc49985.354ENSAPLG00000009729-9985.374Anas_platyrhynchos
ENSAOCG00000021529pabpc49885.106ENSACAG00000002544PABPC49984.409Anolis_carolinensis
ENSAOCG00000021529pabpc410090.583ENSANAG00000025079PABPC49983.360Aotus_nancymaae
ENSAOCG00000021529pabpc410096.651ENSACLG00000019558pabpc410096.651Astatotilapia_calliptera
ENSAOCG00000021529pabpc49985.895ENSAMXG00000018779pabpc49886.495Astyanax_mexicanus
ENSAOCG00000021529pabpc46084.431ENSBTAG00000048536-9584.431Bos_taurus
ENSAOCG00000021529pabpc49190.807ENSBTAG00000017125PABPC49981.240Bos_taurus
ENSAOCG00000021529pabpc47285.714ENSCJAG00000045953-8579.018Callithrix_jacchus
ENSAOCG00000021529pabpc410090.583ENSCJAG00000002512-9983.360Callithrix_jacchus
ENSAOCG00000021529pabpc49990.838ENSCAFG00000003081PABPC49983.518Canis_familiaris
ENSAOCG00000021529pabpc410080.120ENSCAFG00020004161PABPC49979.848Canis_lupus_dingo
ENSAOCG00000021529pabpc49190.583ENSCHIG00000019398-9979.697Capra_hircus
ENSAOCG00000021529pabpc410065.224ENSCHIG00000023385-9965.094Capra_hircus
ENSAOCG00000021529pabpc410083.750ENSTSYG00000006532PABPC49983.518Carlito_syrichta
ENSAOCG00000021529pabpc49983.654ENSCAPG00000015984PABPC49983.280Cavia_aperea
ENSAOCG00000021529pabpc410082.791ENSCPOG00000009552PABPC49983.518Cavia_porcellus
ENSAOCG00000021529pabpc410083.594ENSCCAG00000037306PABPC49983.360Cebus_capucinus
ENSAOCG00000021529pabpc410090.807ENSCATG00000042164PABPC49983.518Cercocebus_atys
ENSAOCG00000021529pabpc410090.807ENSCLAG00000011899PABPC49983.360Chinchilla_lanigera
ENSAOCG00000021529pabpc410090.807ENSCSAG00000001135PABPC49979.848Chlorocebus_sabaeus
ENSAOCG00000021529pabpc49089.211ENSCHOG00000005327PABPC47989.757Choloepus_hoffmanni
ENSAOCG00000021529pabpc49986.614ENSCPBG00000001038PABPC49986.645Chrysemys_picta_bellii
ENSAOCG00000021529pabpc49991.304ENSCANG00000034177PABPC49983.762Colobus_angolensis_palliatus
ENSAOCG00000021529pabpc49885.668ENSCGRG00001018166Pabpc49885.065Cricetulus_griseus_chok1gshd
ENSAOCG00000021529pabpc49785.950ENSCGRG00000009777Pabpc49885.338Cricetulus_griseus_crigri
ENSAOCG00000021529pabpc410096.491ENSCSEG00000000130pabpc410096.491Cynoglossus_semilaevis
ENSAOCG00000021529pabpc49996.104ENSCVAG00000019246pabpc49996.552Cyprinodon_variegatus
ENSAOCG00000021529pabpc49892.823ENSDARG00000059259pabpc410092.562Danio_rerio
ENSAOCG00000021529pabpc49982.777ENSDNOG00000018444-9982.500Dasypus_novemcinctus
ENSAOCG00000021529pabpc49190.807ENSDORG00000011581Pabpc49981.677Dipodomys_ordii
ENSAOCG00000021529pabpc410090.625ENSETEG00000018453-8490.625Echinops_telfairi
ENSAOCG00000021529pabpc48554.396ENSETEG00000009172-9952.632Echinops_telfairi
ENSAOCG00000021529pabpc49876.471ENSEBUG00000000992pabpc49976.153Eptatretus_burgeri
ENSAOCG00000021529pabpc49677.236ENSEBUG00000013782pabpc49976.592Eptatretus_burgeri
ENSAOCG00000021529pabpc410090.807ENSEASG00005014119PABPC49979.848Equus_asinus_asinus
ENSAOCG00000021529pabpc410090.807ENSECAG00000009396PABPC49979.848Equus_caballus
ENSAOCG00000021529pabpc49779.141ENSEEUG00000002962PABPC49978.485Erinaceus_europaeus
ENSAOCG00000021529pabpc49892.994ENSELUG00000003195pabpc49992.698Esox_lucius
ENSAOCG00000021529pabpc410083.750ENSFCAG00000015254-9983.518Felis_catus
ENSAOCG00000021529pabpc49985.962ENSFALG00000000543PABPC49985.987Ficedula_albicollis
ENSAOCG00000021529pabpc48952.092ENSFDAG00000010581-9948.889Fukomys_damarensis
ENSAOCG00000021529pabpc49190.807ENSFDAG00000020016-9980.000Fukomys_damarensis
ENSAOCG00000021529pabpc49996.645ENSFHEG00000007548pabpc410096.645Fundulus_heteroclitus
ENSAOCG00000021529pabpc410091.837ENSGMOG00000019025pabpc49992.197Gadus_morhua
ENSAOCG00000021529pabpc49986.299ENSGALG00000003800PABPC49986.328Gallus_gallus
ENSAOCG00000021529pabpc49997.608ENSGAFG00000018195pabpc410097.608Gambusia_affinis
ENSAOCG00000021529pabpc410094.896ENSGACG00000007179pabpc49994.984Gasterosteus_aculeatus
ENSAOCG00000021529pabpc49986.772ENSGAGG00000001888PABPC49986.804Gopherus_agassizii
ENSAOCG00000021529pabpc410090.583ENSGGOG00000004002PABPC49983.360Gorilla_gorilla
ENSAOCG00000021529pabpc410096.491ENSHBUG00000020206pabpc410096.491Haplochromis_burtoni
ENSAOCG00000021529pabpc410082.636ENSHGLG00000011162PABPC49983.360Heterocephalus_glaber_female
ENSAOCG00000021529pabpc410082.636ENSHGLG00100001580PABPC49983.360Heterocephalus_glaber_male
ENSAOCG00000021529pabpc410094.737ENSHCOG00000012694pabpc49996.117Hippocampus_comes
ENSAOCG00000021529pabpc49792.419ENSIPUG00000016620pabpc49992.332Ictalurus_punctatus
ENSAOCG00000021529pabpc410085.008ENSSTOG00000010416PABPC49984.790Ictidomys_tridecemlineatus
ENSAOCG00000021529pabpc410080.982ENSJJAG00000007781Pabpc49980.280Jaculus_jaculus
ENSAOCG00000021529pabpc49995.056ENSKMAG00000013597pabpc49995.800Kryptolebias_marmoratus
ENSAOCG00000021529pabpc410096.820ENSLBEG00000013654pabpc410096.820Labrus_bergylta
ENSAOCG00000021529pabpc49986.321ENSLACG00000011907PABPC49986.508Latimeria_chalumnae
ENSAOCG00000021529pabpc49991.181ENSLOCG00000001877pabpc49991.866Lepisosteus_oculatus
ENSAOCG00000021529pabpc410085.167ENSLAFG00000000151PABPC49984.951Loxodonta_africana
ENSAOCG00000021529pabpc410090.807ENSMFAG00000041481PABPC49983.518Macaca_fascicularis
ENSAOCG00000021529pabpc410090.807ENSMMUG00000007497PABPC49979.848Macaca_mulatta
ENSAOCG00000021529pabpc410090.807ENSMNEG00000043054PABPC49983.360Macaca_nemestrina
ENSAOCG00000021529pabpc410090.807ENSMLEG00000040716PABPC49983.518Mandrillus_leucophaeus
ENSAOCG00000021529pabpc410097.608ENSMAMG00000010025pabpc410097.608Mastacembelus_armatus
ENSAOCG00000021529pabpc410096.491ENSMZEG00005006141pabpc410096.491Maylandia_zebra
ENSAOCG00000021529pabpc49882.939ENSMGAG00000005408PABPC49982.935Meleagris_gallopavo
ENSAOCG00000021529pabpc49874.233ENSMAUG00000019763-8290.816Mesocricetus_auratus
ENSAOCG00000021529pabpc47281.675ENSMAUG00000001295-9777.619Mesocricetus_auratus
ENSAOCG00000021529pabpc46080.117ENSMAUG00000004089-9280.117Mesocricetus_auratus
ENSAOCG00000021529pabpc48884.991ENSMICG00000016633-10084.477Microcebus_murinus
ENSAOCG00000021529pabpc49975.651ENSMICG00000036729-9975.614Microcebus_murinus
ENSAOCG00000021529pabpc410084.211ENSMOCG00000006763Pabpc49884.253Microtus_ochrogaster
ENSAOCG00000021529pabpc410093.027ENSMMOG00000002363pabpc49993.355Mola_mola
ENSAOCG00000021529pabpc48993.512ENSMODG00000017657-9983.053Monodelphis_domestica
ENSAOCG00000021529pabpc46270.933ENSMODG00000018051-9670.933Monodelphis_domestica
ENSAOCG00000021529pabpc410097.297ENSMALG00000011017pabpc410097.297Monopterus_albus
ENSAOCG00000021529pabpc49971.088MGP_CAROLIEiJ_G0024864-9974.054Mus_caroli
ENSAOCG00000021529pabpc49189.686MGP_CAROLIEiJ_G0026435-10096.454Mus_caroli
ENSAOCG00000021529pabpc410084.848ENSMUSG00000011257Pabpc410094.643Mus_musculus
ENSAOCG00000021529pabpc49090.618MGP_PahariEiJ_G0028765Pabpc410097.163Mus_pahari
ENSAOCG00000021529pabpc49088.679MGP_SPRETEiJ_G0027415Pabpc410097.163Mus_spretus
ENSAOCG00000021529pabpc49546.535ENSMPUG00000006836-10046.129Mustela_putorius_furo
ENSAOCG00000021529pabpc49190.807ENSMPUG00000014414-9979.848Mustela_putorius_furo
ENSAOCG00000021529pabpc410084.848ENSMLUG00000012068PABPC49984.740Myotis_lucifugus
ENSAOCG00000021529pabpc410085.167ENSNGAG00000018292Pabpc49984.951Nannospalax_galili
ENSAOCG00000021529pabpc46298.558ENSNBRG00000009708pabpc49898.558Neolamprologus_brichardi
ENSAOCG00000021529pabpc46898.193ENSNBRG00000010047-7298.193Neolamprologus_brichardi
ENSAOCG00000021529pabpc410083.750ENSNLEG00000011928PABPC49983.518Nomascus_leucogenys
ENSAOCG00000021529pabpc48693.651ENSOPRG00000011984PABPC48793.651Ochotona_princeps
ENSAOCG00000021529pabpc49087.179ENSODEG00000017434-9973.941Octodon_degus
ENSAOCG00000021529pabpc45582.857ENSODEG00000013457-10082.857Octodon_degus
ENSAOCG00000021529pabpc410090.583ENSODEG00000006592-9982.884Octodon_degus
ENSAOCG00000021529pabpc410096.491ENSONIG00000008176pabpc410096.491Oreochromis_niloticus
ENSAOCG00000021529pabpc49986.457ENSOANG00000010001PABPC49986.486Ornithorhynchus_anatinus
ENSAOCG00000021529pabpc48693.421ENSOCUG00000000562PABPC48879.906Oryctolagus_cuniculus
ENSAOCG00000021529pabpc49996.914ENSORLG00000017479pabpc49896.914Oryzias_latipes
ENSAOCG00000021529pabpc49996.914ENSORLG00020018644pabpc49896.914Oryzias_latipes_hni
ENSAOCG00000021529pabpc49996.914ENSORLG00015015042pabpc49896.914Oryzias_latipes_hsok
ENSAOCG00000021529pabpc49996.117ENSOMEG00000014410pabpc49896.117Oryzias_melastigma
ENSAOCG00000021529pabpc49190.807ENSOGAG00000004067PABPC49981.144Otolemur_garnettii
ENSAOCG00000021529pabpc49190.583ENSOARG00000020060PABPC49979.697Ovis_aries
ENSAOCG00000021529pabpc410090.583ENSPPAG00000043625PABPC49983.360Pan_paniscus
ENSAOCG00000021529pabpc410083.750ENSPPRG00000024727PABPC49983.518Panthera_pardus
ENSAOCG00000021529pabpc410083.750ENSPTIG00000005829PABPC49983.518Panthera_tigris_altaica
ENSAOCG00000021529pabpc410090.583ENSPTRG00000000573PABPC49983.360Pan_troglodytes
ENSAOCG00000021529pabpc410083.750ENSPANG00000009484PABPC49983.518Papio_anubis
ENSAOCG00000021529pabpc410090.282ENSPKIG00000025356pabpc49990.820Paramormyrops_kingsleyae
ENSAOCG00000021529pabpc49986.929ENSPSIG00000016892PABPC49986.963Pelodiscus_sinensis
ENSAOCG00000021529pabpc410092.652ENSPMGG00000009073pabpc49992.707Periophthalmus_magnuspinnatus
ENSAOCG00000021529pabpc410080.495ENSPEMG00000024193-9980.727Peromyscus_maniculatus_bairdii
ENSAOCG00000021529pabpc410083.101ENSPEMG00000023569-9984.102Peromyscus_maniculatus_bairdii
ENSAOCG00000021529pabpc48875.261ENSPMAG00000002836pabpc410075.958Petromyzon_marinus
ENSAOCG00000021529pabpc49574.370ENSPMAG00000007885pabpc410073.727Petromyzon_marinus
ENSAOCG00000021529pabpc49693.824ENSPCIG00000020674PABPC49994.417Phascolarctos_cinereus
ENSAOCG00000021529pabpc49995.847ENSPFOG00000002682pabpc49996.117Poecilia_formosa
ENSAOCG00000021529pabpc49996.006ENSPLAG00000010112pabpc49996.278Poecilia_latipinna
ENSAOCG00000021529pabpc49895.942ENSPMEG00000019739pabpc49995.793Poecilia_mexicana
ENSAOCG00000021529pabpc49995.687ENSPREG00000001589pabpc49996.117Poecilia_reticulata
ENSAOCG00000021529pabpc410090.583ENSPPYG00000001506PABPC49979.697Pongo_abelii
ENSAOCG00000021529pabpc49186.111ENSPCAG00000003341PABPC49975.000Procavia_capensis
ENSAOCG00000021529pabpc49969.213ENSPCOG00000025882-9584.375Propithecus_coquereli
ENSAOCG00000021529pabpc410082.353ENSPCOG00000023725-9983.386Propithecus_coquereli
ENSAOCG00000021529pabpc49990.814ENSPVAG00000002187PABPC49978.655Pteropus_vampyrus
ENSAOCG00000021529pabpc410096.651ENSPNYG00000006134pabpc410096.651Pundamilia_nyererei
ENSAOCG00000021529pabpc49993.185ENSPNAG00000024355pabpc49993.891Pygocentrus_nattereri
ENSAOCG00000021529pabpc410081.527ENSRNOG00000015642Pabpc49981.620Rattus_norvegicus
ENSAOCG00000021529pabpc410079.389ENSRNOG00000028592AABR07035074.19979.439Rattus_norvegicus
ENSAOCG00000021529pabpc410090.807ENSRBIG00000039761PABPC49983.518Rhinopithecus_bieti
ENSAOCG00000021529pabpc410090.807ENSRROG00000033355PABPC49983.518Rhinopithecus_roxellana
ENSAOCG00000021529pabpc410083.594ENSSBOG00000026193PABPC49983.360Saimiri_boliviensis_boliviensis
ENSAOCG00000021529pabpc49787.159ENSSHAG00000018139PABPC49986.328Sarcophilus_harrisii
ENSAOCG00000021529pabpc49990.850ENSSFOG00015023514pabpc49991.542Scleropages_formosus
ENSAOCG00000021529pabpc410096.810ENSSMAG00000009007pabpc410096.810Scophthalmus_maximus
ENSAOCG00000021529pabpc410097.927ENSSDUG00000012683pabpc410097.927Seriola_dumerili
ENSAOCG00000021529pabpc410097.927ENSSLDG00000013025pabpc410097.927Seriola_lalandi_dorsalis
ENSAOCG00000021529pabpc410081.614ENSSARG00000000310PABPC49973.485Sorex_araneus
ENSAOCG00000021529pabpc49986.963ENSSPUG00000003204PABPC49986.998Sphenodon_punctatus
ENSAOCG00000021529pabpc410098.246ENSSPAG00000009252pabpc410098.246Stegastes_partitus
ENSAOCG00000021529pabpc48844.936ENSSSCG00000036170-9544.946Sus_scrofa
ENSAOCG00000021529pabpc410083.750ENSSSCG00000003660-9983.518Sus_scrofa
ENSAOCG00000021529pabpc49981.805ENSTGUG00000001266PABPC49981.942Taeniopygia_guttata
ENSAOCG00000021529pabpc410094.737ENSTRUG00000005907pabpc49995.307Takifugu_rubripes
ENSAOCG00000021529pabpc410088.357ENSTNIG00000016902pabpc49988.673Tetraodon_nigroviridis
ENSAOCG00000021529pabpc49086.111ENSTBEG00000009035PABPC47988.889Tupaia_belangeri
ENSAOCG00000021529pabpc49086.111ENSTTRG00000014340PABPC47888.889Tursiops_truncatus
ENSAOCG00000021529pabpc410083.750ENSUAMG00000000303PABPC49983.518Ursus_americanus
ENSAOCG00000021529pabpc410089.342ENSUMAG00000019585PABPC49991.566Ursus_maritimus
ENSAOCG00000021529pabpc46980.645ENSVPAG00000010041PABPC47370.206Vicugna_pacos
ENSAOCG00000021529pabpc410083.750ENSVVUG00000005215PABPC49983.518Vulpes_vulpes
ENSAOCG00000021529pabpc49982.650ENSXETG00000010946pabpc49982.484Xenopus_tropicalis
ENSAOCG00000021529pabpc46896.429ENSXETG00000027221-10096.429Xenopus_tropicalis
ENSAOCG00000021529pabpc49997.098ENSXCOG00000013190pabpc49695.755Xiphophorus_couchianus
ENSAOCG00000021529pabpc49995.687ENSXMAG00000019007pabpc49996.117Xiphophorus_maculatus

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