EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000021565 (Gene tree)
Gene ID: 111562723
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 180-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 4886 bases
Position: chrNXFZ01006175.1:138087-142972
Accession: 111562723
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000016615	zf-C2H2	PF00096.26	7.1e-18	1	3
ENSAOCP00000016615	zf-C2H2	PF00096.26	7.1e-18	2	3
ENSAOCP00000016615	zf-C2H2	PF00096.26	7.1e-18	3	3
ENSAOCP00000016615	zf-met	PF12874.7	1.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000032366	-	2129	XM_023261413	ENSAOCP00000016615	392 (aa)	XP_023117181	UPI000C30296C

Gene Model

Click here to download ENSAOCG00000021565's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000021565's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000021565	-	52	40.373	ENSAOCG00000007045	-	82	40.373
ENSAOCG00000021565	-	53	38.323	ENSAOCG00000019475	-	61	53.968
ENSAOCG00000021565	-	92	38.393	ENSAOCG00000016905	-	57	45.902
ENSAOCG00000021565	-	55	38.806	ENSAOCG00000021557	scrt2	73	39.098
ENSAOCG00000021565	-	98	40.566	ENSAOCG00000021436	-	96	40.566
ENSAOCG00000021565	-	65	40.000	ENSAOCG00000023414	znf652	50	40.000
ENSAOCG00000021565	-	90	40.606	ENSAOCG00000002795	-	96	40.606
ENSAOCG00000021565	-	99	48.052	ENSAOCG00000020652	-	100	48.052
ENSAOCG00000021565	-	98	30.827	ENSAOCG00000022529	-	97	31.750
ENSAOCG00000021565	-	65	39.375	ENSAOCG00000021187	gfi1b	52	39.375
ENSAOCG00000021565	-	86	39.394	ENSAOCG00000009970	-	66	39.394
ENSAOCG00000021565	-	80	40.714	ENSAOCG00000013578	-	72	40.714
ENSAOCG00000021565	-	54	51.250	ENSAOCG00000012813	-	72	51.250
ENSAOCG00000021565	-	52	42.683	ENSAOCG00000022276	-	94	42.683
ENSAOCG00000021565	-	62	35.780	ENSAOCG00000017968	snai2	53	35.780
ENSAOCG00000021565	-	71	35.185	ENSAOCG00000022375	-	90	38.660
ENSAOCG00000021565	-	55	44.086	ENSAOCG00000022459	-	93	44.086
ENSAOCG00000021565	-	83	42.424	ENSAOCG00000018307	-	95	42.424
ENSAOCG00000021565	-	78	39.394	ENSAOCG00000014165	-	96	39.053
ENSAOCG00000021565	-	86	43.885	ENSAOCG00000013978	-	91	41.818
ENSAOCG00000021565	-	53	39.394	ENSAOCG00000003910	scrt1b	58	39.394
ENSAOCG00000021565	-	86	43.478	ENSAOCG00000013951	-	88	43.478
ENSAOCG00000021565	-	52	39.766	ENSAOCG00000007388	-	71	39.766
ENSAOCG00000021565	-	91	40.606	ENSAOCG00000017602	-	97	40.606
ENSAOCG00000021565	-	84	38.788	ENSAOCG00000002430	-	61	38.788
ENSAOCG00000021565	-	52	37.600	ENSAOCG00000019753	-	69	37.600
ENSAOCG00000021565	-	71	34.940	ENSAOCG00000016409	-	79	36.250
ENSAOCG00000021565	-	80	37.288	ENSAOCG00000022079	-	80	40.385
ENSAOCG00000021565	-	90	43.030	ENSAOCG00000017595	-	97	43.030
ENSAOCG00000021565	-	51	43.750	ENSAOCG00000014818	znf319b	72	32.515
ENSAOCG00000021565	-	54	42.424	ENSAOCG00000000448	-	94	42.424
ENSAOCG00000021565	-	57	39.535	ENSAOCG00000001341	-	86	37.589
ENSAOCG00000021565	-	77	42.331	ENSAOCG00000022675	-	94	49.383
ENSAOCG00000021565	-	95	41.317	ENSAOCG00000003277	-	72	49.123
ENSAOCG00000021565	-	51	38.182	ENSAOCG00000016737	-	100	38.953
ENSAOCG00000021565	-	76	44.242	ENSAOCG00000015586	-	89	44.242
ENSAOCG00000021565	-	52	50.000	ENSAOCG00000013124	-	66	50.000
ENSAOCG00000021565	-	98	45.181	ENSAOCG00000012903	-	95	45.963
ENSAOCG00000021565	-	63	38.182	ENSAOCG00000015987	-	60	38.182
ENSAOCG00000021565	-	78	42.623	ENSAOCG00000007134	-	77	41.791
ENSAOCG00000021565	-	56	40.606	ENSAOCG00000024281	-	92	40.606
ENSAOCG00000021565	-	100	43.478	ENSAOCG00000007146	-	91	42.105
ENSAOCG00000021565	-	79	42.424	ENSAOCG00000018484	-	95	43.885
ENSAOCG00000021565	-	76	41.317	ENSAOCG00000020830	-	93	44.706
ENSAOCG00000021565	-	67	47.273	ENSAOCG00000016897	-	65	47.273
ENSAOCG00000021565	-	99	41.104	ENSAOCG00000010954	-	99	35.849
ENSAOCG00000021565	-	96	42.424	ENSAOCG00000013934	-	95	42.424
ENSAOCG00000021565	-	51	45.378	ENSAOCG00000000570	-	63	45.378
ENSAOCG00000021565	-	77	43.636	ENSAOCG00000013130	-	77	43.636
ENSAOCG00000021565	-	97	46.043	ENSAOCG00000012829	-	87	46.043
ENSAOCG00000021565	-	91	40.000	ENSAOCG00000000655	-	52	42.647
ENSAOCG00000021565	-	51	37.037	ENSAOCG00000008304	zbtb48	53	37.037
ENSAOCG00000021565	-	80	41.818	ENSAOCG00000015369	-	99	45.192
ENSAOCG00000021565	-	55	31.343	ENSAOCG00000005450	ZNF319	82	32.948

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000021565	-	79	37.037	ENSACIG00000000360	si:ch211-241b2.1	87	38.636	Amphilophus_citrinellus
ENSAOCG00000021565	-	78	44.828	ENSATEG00000008683	si:ch211-241b2.1	71	44.828	Anabas_testudineus
ENSAOCG00000021565	-	52	47.312	ENSDARG00000088507	znf982	77	57.692	Danio_rerio
ENSAOCG00000021565	-	54	35.849	ENSDARG00000098661	AL935300.3	98	33.906	Danio_rerio
ENSAOCG00000021565	-	93	35.859	ENSELUG00000008131	-	100	48.077	Esox_lucius
ENSAOCG00000021565	-	52	37.500	ENSFHEG00000018209	-	72	37.500	Fundulus_heteroclitus
ENSAOCG00000021565	-	86	37.423	ENSFHEG00000013152	-	93	37.423	Fundulus_heteroclitus
ENSAOCG00000021565	-	85	41.667	ENSHBUG00000018916	-	55	39.394	Haplochromis_burtoni
ENSAOCG00000021565	-	81	48.864	ENSHBUG00000009953	-	56	48.864	Haplochromis_burtoni
ENSAOCG00000021565	-	99	63.131	ENSLBEG00000020461	-	99	62.879	Labrus_bergylta
ENSAOCG00000021565	-	99	34.118	ENSMAMG00000014743	-	91	34.118	Mastacembelus_armatus
ENSAOCG00000021565	-	84	35.135	ENSMZEG00005026470	-	55	35.754	Maylandia_zebra
ENSAOCG00000021565	-	76	38.621	ENSMZEG00005027793	-	65	38.621	Maylandia_zebra
ENSAOCG00000021565	-	68	40.462	ENSMZEG00005027943	-	94	49.505	Maylandia_zebra
ENSAOCG00000021565	-	53	38.953	ENSMZEG00005021426	-	78	38.953	Maylandia_zebra
ENSAOCG00000021565	-	52	34.591	ENSMZEG00005022161	-	89	37.857	Maylandia_zebra
ENSAOCG00000021565	-	52	34.969	ENSMALG00000008638	-	64	32.474	Monopterus_albus
ENSAOCG00000021565	-	91	41.525	ENSMALG00000018074	-	98	41.525	Monopterus_albus
ENSAOCG00000021565	-	77	40.828	ENSPLAG00000016561	zgc:113348	96	43.478	Poecilia_latipinna
ENSAOCG00000021565	-	53	36.585	ENSPMEG00000007573	zgc:113343	70	36.585	Poecilia_mexicana
ENSAOCG00000021565	-	50	31.507	ENSSPAG00000009426	-	72	31.507	Stegastes_partitus
ENSAOCG00000021565	-	55	35.897	ENSSPAG00000013109	si:ch211-241b2.1	82	36.458	Stegastes_partitus