EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000021757 (Gene tree)
Gene ID: 111578473
Gene Symbol: srrm1
Alias: wu:fb34f04|wu:fb38b06|zgc:63802
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 10995 bases
Position: chrNXFZ01003332.1:188225-199219
Accession: 111578473
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000030641	PWI	PF01480.17	7.6e-31	1	1
ENSAOCP00000016773	PWI	PF01480.17	8e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000032438	-	3927	XM_023285306	ENSAOCP00000016773	862 (aa)	XP_023141074	UPI000C3111AA
ENSAOCT00000025829	-	3840	-	ENSAOCP00000030641	833 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000021757's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000021757's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000021757	srrm1	100	97.222	ENSAPOG00000001170	srrm1	99	100.000	Acanthochromis_polyacanthus
ENSAOCG00000021757	srrm1	100	99.304	ENSAPEG00000018964	srrm1	100	99.304	Amphiprion_percula
ENSAOCG00000021757	srrm1	60	89.575	ENSATEG00000007659	srrm1	60	89.189	Anabas_testudineus
ENSAOCG00000021757	srrm1	58	50.741	ENSDARG00000001244	srrm1	99	96.154	Danio_rerio
ENSAOCG00000021757	srrm1	69	74.823	ENSGMOG00000019099	srrm1	50	75.524	Gadus_morhua
ENSAOCG00000021757	srrm1	60	82.785	ENSGACG00000007266	srrm1	100	71.061	Gasterosteus_aculeatus
ENSAOCG00000021757	srrm1	58	82.800	ENSHBUG00000020364	srrm1	63	79.400	Haplochromis_burtoni
ENSAOCG00000021757	srrm1	72	90.311	ENSLBEG00000013936	srrm1	100	84.211	Labrus_bergylta
ENSAOCG00000021757	srrm1	100	87.153	ENSMAMG00000010305	srrm1	100	84.606	Mastacembelus_armatus
ENSAOCG00000021757	srrm1	58	83.800	ENSONIG00000008206	srrm1	54	80.400	Oreochromis_niloticus
ENSAOCG00000021757	srrm1	100	76.212	ENSORLG00015014743	srrm1	61	81.202	Oryzias_latipes_hsok
ENSAOCG00000021757	srrm1	67	77.817	ENSPKIG00000008252	srrm1	62	77.113	Paramormyrops_kingsleyae
ENSAOCG00000021757	srrm1	68	82.593	ENSPREG00000002652	srrm1	64	86.486	Poecilia_reticulata
ENSAOCG00000021757	srrm1	100	89.102	ENSSDUG00000012967	srrm1	100	86.806	Seriola_dumerili
ENSAOCG00000021757	srrm1	100	84.855	ENSSLDG00000012771	srrm1	60	92.278	Seriola_lalandi_dorsalis
ENSAOCG00000021757	srrm1	100	94.329	ENSSPAG00000009507	srrm1	100	94.329	Stegastes_partitus
ENSAOCG00000021757	srrm1	100	73.743	ENSTRUG00000002519	srrm1	60	82.012	Takifugu_rubripes
ENSAOCG00000021757	srrm1	99	70.291	ENSTNIG00000016909	srrm1	63	82.592	Tetraodon_nigroviridis