EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000021847 (Gene tree)
Gene ID: 111568615
Gene Symbol: lsm12b
Alias: lsm12|wu:fe01f11|zgc:66039
Full Name: LSM12 homolog
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 10096 bases
Position: chrNXFZ01002203.1:5485-15580
Accession: 111568615
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000030702	AD	PF09793.9	4.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000025926	-	1774	XM_023270333	ENSAOCP00000030702	224 (aa)	XP_023126101	-

Gene Model

Click here to download ENSAOCG00000021847's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000021847's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000021847	lsm12b	88	85.714	ENSG00000161654	LSM12	100	85.714	Homo_sapiens
ENSAOCG00000021847	lsm12b	88	99.490	ENSAPOG00000007907	lsm12b	100	99.490	Acanthochromis_polyacanthus
ENSAOCG00000021847	lsm12b	88	83.920	ENSAMEG00000018321	LSM12	100	83.920	Ailuropoda_melanoleuca
ENSAOCG00000021847	lsm12b	88	97.959	ENSACIG00000008538	lsm12b	100	97.959	Amphilophus_citrinellus
ENSAOCG00000021847	lsm12b	88	100.000	ENSAPEG00000002252	lsm12b	100	100.000	Amphiprion_percula
ENSAOCG00000021847	lsm12b	88	98.469	ENSATEG00000005705	lsm12b	100	98.469	Anabas_testudineus
ENSAOCG00000021847	lsm12b	88	84.694	ENSACAG00000004618	LSM12	100	84.694	Anolis_carolinensis
ENSAOCG00000021847	lsm12b	88	85.714	ENSANAG00000029011	LSM12	100	85.714	Aotus_nancymaae
ENSAOCG00000021847	lsm12b	88	98.469	ENSACLG00000026332	lsm12b	100	98.469	Astatotilapia_calliptera
ENSAOCG00000021847	lsm12b	88	86.294	ENSAMXG00000036117	lsm12a	92	86.294	Astyanax_mexicanus
ENSAOCG00000021847	lsm12b	88	94.388	ENSAMXG00000032952	lsm12b	100	94.388	Astyanax_mexicanus
ENSAOCG00000021847	lsm12b	88	85.714	ENSBTAG00000016252	LSM12	100	85.714	Bos_taurus
ENSAOCG00000021847	lsm12b	88	85.714	ENSCJAG00000048480	LSM12	100	85.714	Callithrix_jacchus
ENSAOCG00000021847	lsm12b	88	85.787	ENSCAFG00000014379	LSM12	92	85.787	Canis_familiaris
ENSAOCG00000021847	lsm12b	88	85.714	ENSCAFG00020012173	LSM12	100	85.714	Canis_lupus_dingo
ENSAOCG00000021847	lsm12b	88	85.714	ENSCHIG00000018175	LSM12	100	85.714	Capra_hircus
ENSAOCG00000021847	lsm12b	88	85.714	ENSTSYG00000036361	LSM12	100	85.714	Carlito_syrichta
ENSAOCG00000021847	lsm12b	72	81.481	ENSCAPG00000009647	LSM12	89	81.481	Cavia_aperea
ENSAOCG00000021847	lsm12b	88	84.694	ENSCPOG00000012860	LSM12	100	84.694	Cavia_porcellus
ENSAOCG00000021847	lsm12b	88	85.714	ENSCCAG00000032905	LSM12	100	85.714	Cebus_capucinus
ENSAOCG00000021847	lsm12b	88	85.714	ENSCATG00000030577	-	100	85.714	Cercocebus_atys
ENSAOCG00000021847	lsm12b	88	85.204	ENSCLAG00000015759	LSM12	100	85.204	Chinchilla_lanigera
ENSAOCG00000021847	lsm12b	88	86.224	ENSCSAG00000003486	LSM12	100	86.224	Chlorocebus_sabaeus
ENSAOCG00000021847	lsm12b	88	86.224	ENSCPBG00000027105	LSM12	100	86.224	Chrysemys_picta_bellii
ENSAOCG00000021847	lsm12b	88	85.714	ENSCANG00000043328	LSM12	100	85.714	Colobus_angolensis_palliatus
ENSAOCG00000021847	lsm12b	88	85.714	ENSCGRG00001002094	Lsm12	100	85.714	Cricetulus_griseus_chok1gshd
ENSAOCG00000021847	lsm12b	78	77.586	ENSCGRG00000004316	Lsm12	98	77.586	Cricetulus_griseus_crigri
ENSAOCG00000021847	lsm12b	88	98.469	ENSCSEG00000008434	lsm12b	100	98.469	Cynoglossus_semilaevis
ENSAOCG00000021847	lsm12b	88	97.959	ENSCVAG00000008755	lsm12b	100	97.959	Cyprinodon_variegatus
ENSAOCG00000021847	lsm12b	88	87.245	ENSDARG00000028848	lsm12a	100	87.245	Danio_rerio
ENSAOCG00000021847	lsm12b	88	95.408	ENSDARG00000109510	lsm12b	100	95.408	Danio_rerio
ENSAOCG00000021847	lsm12b	92	83.902	ENSDNOG00000002418	LSM12	94	83.902	Dasypus_novemcinctus
ENSAOCG00000021847	lsm12b	88	85.714	ENSDORG00000016381	Lsm12	100	85.714	Dipodomys_ordii
ENSAOCG00000021847	lsm12b	72	33.735	FBgn0030364	Lsm12	76	33.735	Drosophila_melanogaster
ENSAOCG00000021847	lsm12b	64	32.911	FBgn0036057	CG14164	83	32.911	Drosophila_melanogaster
ENSAOCG00000021847	lsm12b	77	76.301	ENSETEG00000011012	-	99	76.301	Echinops_telfairi
ENSAOCG00000021847	lsm12b	88	85.204	ENSETEG00000008374	LSM12	100	85.204	Echinops_telfairi
ENSAOCG00000021847	lsm12b	75	67.066	ENSEBUG00000016299	lsm12a	92	67.066	Eptatretus_burgeri
ENSAOCG00000021847	lsm12b	88	85.714	ENSEASG00005010155	LSM12	100	85.714	Equus_asinus_asinus
ENSAOCG00000021847	lsm12b	88	85.714	ENSECAG00000009071	LSM12	100	85.714	Equus_caballus
ENSAOCG00000021847	lsm12b	68	85.621	ENSEEUG00000002419	-	100	85.621	Erinaceus_europaeus
ENSAOCG00000021847	lsm12b	91	95.588	ENSELUG00000015538	lsm12b	96	95.588	Esox_lucius
ENSAOCG00000021847	lsm12b	88	92.857	ENSELUG00000000256	-	100	92.857	Esox_lucius
ENSAOCG00000021847	lsm12b	88	85.714	ENSFCAG00000037021	LSM12	100	85.714	Felis_catus
ENSAOCG00000021847	lsm12b	70	82.051	ENSFDAG00000008954	LSM12	91	82.051	Fukomys_damarensis
ENSAOCG00000021847	lsm12b	88	97.959	ENSFHEG00000019913	lsm12b	100	97.959	Fundulus_heteroclitus
ENSAOCG00000021847	lsm12b	71	98.734	ENSGMOG00000015449	lsm12b	100	98.734	Gadus_morhua
ENSAOCG00000021847	lsm12b	68	86.275	ENSGALG00000039803	LSM12	100	86.275	Gallus_gallus
ENSAOCG00000021847	lsm12b	88	97.959	ENSGAFG00000011829	lsm12b	100	97.959	Gambusia_affinis
ENSAOCG00000021847	lsm12b	71	99.367	ENSGACG00000003428	lsm12b	100	99.367	Gasterosteus_aculeatus
ENSAOCG00000021847	lsm12b	88	85.204	ENSGAGG00000021965	LSM12	100	85.204	Gopherus_agassizii
ENSAOCG00000021847	lsm12b	88	85.714	ENSGGOG00000010589	-	100	85.714	Gorilla_gorilla
ENSAOCG00000021847	lsm12b	75	98.204	ENSHBUG00000007667	lsm12b	74	98.204	Haplochromis_burtoni
ENSAOCG00000021847	lsm12b	88	85.714	ENSHGLG00000011411	LSM12	100	85.714	Heterocephalus_glaber_female
ENSAOCG00000021847	lsm12b	69	85.065	ENSHGLG00100000241	LSM12	82	85.065	Heterocephalus_glaber_male
ENSAOCG00000021847	lsm12b	88	95.918	ENSHCOG00000002094	lsm12b	100	95.918	Hippocampus_comes
ENSAOCG00000021847	lsm12b	87	84.021	ENSIPUG00000008936	lsm12a	99	84.021	Ictalurus_punctatus
ENSAOCG00000021847	lsm12b	88	94.898	ENSIPUG00000014800	lsm12	100	94.898	Ictalurus_punctatus
ENSAOCG00000021847	lsm12b	88	85.714	ENSSTOG00000007403	LSM12	100	85.714	Ictidomys_tridecemlineatus
ENSAOCG00000021847	lsm12b	70	73.585	ENSJJAG00000014652	-	95	73.585	Jaculus_jaculus
ENSAOCG00000021847	lsm12b	88	84.694	ENSJJAG00000004364	-	100	85.455	Jaculus_jaculus
ENSAOCG00000021847	lsm12b	84	76.316	ENSJJAG00000011793	-	100	76.316	Jaculus_jaculus
ENSAOCG00000021847	lsm12b	75	97.605	ENSKMAG00000007704	lsm12b	56	97.605	Kryptolebias_marmoratus
ENSAOCG00000021847	lsm12b	88	99.490	ENSLBEG00000027999	lsm12b	100	99.490	Labrus_bergylta
ENSAOCG00000021847	lsm12b	88	88.265	ENSLACG00000015981	LSM12	100	88.265	Latimeria_chalumnae
ENSAOCG00000021847	lsm12b	88	92.893	ENSLOCG00000013079	lsm12b	100	92.893	Lepisosteus_oculatus
ENSAOCG00000021847	lsm12b	88	85.714	ENSLAFG00000005202	LSM12	100	85.714	Loxodonta_africana
ENSAOCG00000021847	lsm12b	88	85.714	ENSMFAG00000031376	LSM12	100	85.714	Macaca_fascicularis
ENSAOCG00000021847	lsm12b	88	85.714	ENSMMUG00000006804	LSM12	100	85.714	Macaca_mulatta
ENSAOCG00000021847	lsm12b	57	74.713	ENSMMUG00000042106	-	100	74.713	Macaca_mulatta
ENSAOCG00000021847	lsm12b	88	85.714	ENSMNEG00000030594	-	100	85.714	Macaca_nemestrina
ENSAOCG00000021847	lsm12b	88	85.714	ENSMLEG00000039934	LSM12	100	85.714	Mandrillus_leucophaeus
ENSAOCG00000021847	lsm12b	88	99.490	ENSMAMG00000004279	lsm12b	100	99.490	Mastacembelus_armatus
ENSAOCG00000021847	lsm12b	88	98.469	ENSMZEG00005005754	lsm12b	100	98.469	Maylandia_zebra
ENSAOCG00000021847	lsm12b	88	86.224	ENSMICG00000037219	LSM12	100	86.224	Microcebus_murinus
ENSAOCG00000021847	lsm12b	88	85.714	ENSMOCG00000019878	-	100	85.714	Microtus_ochrogaster
ENSAOCG00000021847	lsm12b	90	71.287	ENSMOCG00000017015	-	89	71.287	Microtus_ochrogaster
ENSAOCG00000021847	lsm12b	88	99.490	ENSMMOG00000020848	lsm12b	100	99.490	Mola_mola
ENSAOCG00000021847	lsm12b	88	99.490	ENSMALG00000007578	lsm12b	100	99.490	Monopterus_albus
ENSAOCG00000021847	lsm12b	88	85.204	MGP_CAROLIEiJ_G0017241	Lsm12	100	85.204	Mus_caroli
ENSAOCG00000021847	lsm12b	88	85.714	ENSMUSG00000020922	Lsm12	100	85.714	Mus_musculus
ENSAOCG00000021847	lsm12b	88	78.873	MGP_PahariEiJ_G0018371	Lsm12	100	78.873	Mus_pahari
ENSAOCG00000021847	lsm12b	88	85.204	MGP_SPRETEiJ_G0018084	Lsm12	99	87.037	Mus_spretus
ENSAOCG00000021847	lsm12b	88	86.224	ENSMLUG00000006391	LSM12	100	86.224	Myotis_lucifugus
ENSAOCG00000021847	lsm12b	88	85.714	ENSNGAG00000001870	Lsm12	100	85.714	Nannospalax_galili
ENSAOCG00000021847	lsm12b	88	59.113	ENSNGAG00000015429	-	100	59.113	Nannospalax_galili
ENSAOCG00000021847	lsm12b	88	98.469	ENSNBRG00000006266	lsm12b	100	98.469	Neolamprologus_brichardi
ENSAOCG00000021847	lsm12b	88	85.714	ENSNLEG00000005580	-	100	85.714	Nomascus_leucogenys
ENSAOCG00000021847	lsm12b	74	85.542	ENSMEUG00000007501	-	100	85.542	Notamacropus_eugenii
ENSAOCG00000021847	lsm12b	88	85.714	ENSOPRG00000008552	LSM12	100	85.714	Ochotona_princeps
ENSAOCG00000021847	lsm12b	87	85.567	ENSODEG00000017998	-	99	85.567	Octodon_degus
ENSAOCG00000021847	lsm12b	88	78.061	ENSODEG00000007886	-	74	78.061	Octodon_degus
ENSAOCG00000021847	lsm12b	88	98.469	ENSONIG00000007933	lsm12b	100	98.469	Oreochromis_niloticus
ENSAOCG00000021847	lsm12b	88	83.920	ENSOCUG00000008566	-	100	83.920	Oryctolagus_cuniculus
ENSAOCG00000021847	lsm12b	87	80.513	ENSOCUG00000021254	-	100	80.513	Oryctolagus_cuniculus
ENSAOCG00000021847	lsm12b	87	80.000	ENSOCUG00000027889	-	100	80.000	Oryctolagus_cuniculus
ENSAOCG00000021847	lsm12b	87	79.487	ENSOCUG00000024823	-	100	79.487	Oryctolagus_cuniculus
ENSAOCG00000021847	lsm12b	88	97.959	ENSORLG00000011310	lsm12b	100	97.959	Oryzias_latipes
ENSAOCG00000021847	lsm12b	92	98.049	ENSORLG00020002060	lsm12b	96	98.049	Oryzias_latipes_hni
ENSAOCG00000021847	lsm12b	92	98.049	ENSORLG00015001647	lsm12b	96	98.049	Oryzias_latipes_hsok
ENSAOCG00000021847	lsm12b	91	99.020	ENSOMEG00000006184	lsm12b	95	99.020	Oryzias_melastigma
ENSAOCG00000021847	lsm12b	88	86.224	ENSOGAG00000010489	LSM12	100	86.224	Otolemur_garnettii
ENSAOCG00000021847	lsm12b	88	82.673	ENSOARG00000006589	LSM12	100	82.673	Ovis_aries
ENSAOCG00000021847	lsm12b	88	76.020	ENSPPAG00000034974	-	100	76.020	Pan_paniscus
ENSAOCG00000021847	lsm12b	88	85.714	ENSPPRG00000023420	LSM12	100	85.714	Panthera_pardus
ENSAOCG00000021847	lsm12b	68	85.621	ENSPTIG00000012704	-	82	85.621	Panthera_tigris_altaica
ENSAOCG00000021847	lsm12b	63	84.545	ENSPTIG00000014850	-	100	84.545	Panthera_tigris_altaica
ENSAOCG00000021847	lsm12b	88	85.714	ENSPTRG00000009261	LSM12	100	85.714	Pan_troglodytes
ENSAOCG00000021847	lsm12b	88	85.714	ENSPANG00000021315	-	100	85.714	Papio_anubis
ENSAOCG00000021847	lsm12b	88	84.184	ENSPKIG00000017932	-	100	84.184	Paramormyrops_kingsleyae
ENSAOCG00000021847	lsm12b	88	93.878	ENSPKIG00000021058	lsm12b	100	93.878	Paramormyrops_kingsleyae
ENSAOCG00000021847	lsm12b	88	98.469	ENSPMGG00000021344	lsm12b	100	98.469	Periophthalmus_magnuspinnatus
ENSAOCG00000021847	lsm12b	88	85.714	ENSPEMG00000012199	Lsm12	100	85.714	Peromyscus_maniculatus_bairdii
ENSAOCG00000021847	lsm12b	78	68.000	ENSPMAG00000005461	lsm12a	99	68.000	Petromyzon_marinus
ENSAOCG00000021847	lsm12b	88	85.714	ENSPCIG00000020244	LSM12	100	85.714	Phascolarctos_cinereus
ENSAOCG00000021847	lsm12b	88	96.939	ENSPFOG00000015930	lsm12b	100	96.939	Poecilia_formosa
ENSAOCG00000021847	lsm12b	88	96.939	ENSPLAG00000021089	lsm12b	100	96.939	Poecilia_latipinna
ENSAOCG00000021847	lsm12b	88	96.939	ENSPMEG00000012961	lsm12b	100	96.939	Poecilia_mexicana
ENSAOCG00000021847	lsm12b	76	98.246	ENSPREG00000010236	lsm12b	95	98.246	Poecilia_reticulata
ENSAOCG00000021847	lsm12b	88	85.714	ENSPPYG00000008344	LSM12	100	85.714	Pongo_abelii
ENSAOCG00000021847	lsm12b	71	86.164	ENSPCAG00000008790	LSM12	100	86.164	Procavia_capensis
ENSAOCG00000021847	lsm12b	88	85.714	ENSPCOG00000027951	LSM12	100	85.714	Propithecus_coquereli
ENSAOCG00000021847	lsm12b	88	86.224	ENSPVAG00000013706	LSM12	100	86.224	Pteropus_vampyrus
ENSAOCG00000021847	lsm12b	88	98.469	ENSPNYG00000003386	lsm12b	100	98.469	Pundamilia_nyererei
ENSAOCG00000021847	lsm12b	88	85.204	ENSPNAG00000018435	lsm12a	100	85.204	Pygocentrus_nattereri
ENSAOCG00000021847	lsm12b	88	94.898	ENSPNAG00000004186	lsm12b	100	94.898	Pygocentrus_nattereri
ENSAOCG00000021847	lsm12b	88	85.714	ENSRNOG00000020894	Lsm12	100	85.714	Rattus_norvegicus
ENSAOCG00000021847	lsm12b	88	85.714	ENSRBIG00000027910	LSM12	100	85.714	Rhinopithecus_bieti
ENSAOCG00000021847	lsm12b	87	53.608	ENSRROG00000000537	-	99	53.608	Rhinopithecus_roxellana
ENSAOCG00000021847	lsm12b	88	85.714	ENSRROG00000045530	-	100	85.714	Rhinopithecus_roxellana
ENSAOCG00000021847	lsm12b	88	85.714	ENSSBOG00000025310	LSM12	100	85.714	Saimiri_boliviensis_boliviensis
ENSAOCG00000021847	lsm12b	71	84.177	ENSSHAG00000014914	LSM12	100	84.177	Sarcophilus_harrisii
ENSAOCG00000021847	lsm12b	88	95.408	ENSSFOG00015009612	lsm12	100	95.408	Scleropages_formosus
ENSAOCG00000021847	lsm12b	88	94.388	ENSSFOG00015020392	lsm12a	100	94.388	Scleropages_formosus
ENSAOCG00000021847	lsm12b	88	99.490	ENSSMAG00000008089	lsm12b	100	99.490	Scophthalmus_maximus
ENSAOCG00000021847	lsm12b	88	99.490	ENSSDUG00000012711	lsm12b	100	99.490	Seriola_dumerili
ENSAOCG00000021847	lsm12b	88	99.490	ENSSLDG00000007404	lsm12b	100	99.490	Seriola_lalandi_dorsalis
ENSAOCG00000021847	lsm12b	68	84.967	ENSSARG00000005537	LSM12	100	84.967	Sorex_araneus
ENSAOCG00000021847	lsm12b	88	86.224	ENSSPUG00000011984	LSM12	100	86.224	Sphenodon_punctatus
ENSAOCG00000021847	lsm12b	88	100.000	ENSSPAG00000017058	lsm12b	100	100.000	Stegastes_partitus
ENSAOCG00000021847	lsm12b	88	85.714	ENSSSCG00000032394	LSM12	100	85.714	Sus_scrofa
ENSAOCG00000021847	lsm12b	88	98.469	ENSTRUG00000007121	lsm12b	100	98.469	Takifugu_rubripes
ENSAOCG00000021847	lsm12b	88	97.449	ENSTNIG00000014436	lsm12b	100	97.449	Tetraodon_nigroviridis
ENSAOCG00000021847	lsm12b	88	83.163	ENSTBEG00000012392	-	100	83.163	Tupaia_belangeri
ENSAOCG00000021847	lsm12b	88	85.204	ENSTBEG00000012523	-	100	85.204	Tupaia_belangeri
ENSAOCG00000021847	lsm12b	88	85.714	ENSTTRG00000010433	LSM12	100	85.714	Tursiops_truncatus
ENSAOCG00000021847	lsm12b	88	85.714	ENSUAMG00000006313	LSM12	100	85.714	Ursus_americanus
ENSAOCG00000021847	lsm12b	71	82.911	ENSUMAG00000012987	LSM12	90	82.911	Ursus_maritimus
ENSAOCG00000021847	lsm12b	88	81.122	ENSVPAG00000011145	LSM12	100	81.122	Vicugna_pacos
ENSAOCG00000021847	lsm12b	88	85.714	ENSVVUG00000017581	LSM12	100	85.714	Vulpes_vulpes
ENSAOCG00000021847	lsm12b	71	61.250	ENSXETG00000003371	lsm12	77	61.250	Xenopus_tropicalis
ENSAOCG00000021847	lsm12b	88	97.959	ENSXCOG00000003994	lsm12b	100	97.959	Xiphophorus_couchianus
ENSAOCG00000021847	lsm12b	88	97.959	ENSXMAG00000020950	lsm12b	100	97.959	Xiphophorus_maculatus