EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000021975 (Gene tree)
Gene ID: 111584019
Gene Symbol: rpusd1
Alias: fe26f08|wu:fe26f08|zgc:153465
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 4030 bases
Position: chrNXFZ01004202.1:227543-231572
Accession: 111584019
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000030802	PseudoU_synth_2	PF00849.22	2.1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000026112	-	1864	XM_023293270	ENSAOCP00000030802	319 (aa)	XP_023149038	UPI000C3147C6

Gene Model

Click here to download ENSAOCG00000021975's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000021975's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000021975	rpusd1	95	55.769	ENSG00000007376	RPUSD1	99	67.066	Homo_sapiens
ENSAOCG00000021975	rpusd1	97	93.871	ENSAPOG00000022221	rpusd1	100	92.258	Acanthochromis_polyacanthus
ENSAOCG00000021975	rpusd1	95	57.377	ENSAMEG00000007461	RPUSD1	98	57.705	Ailuropoda_melanoleuca
ENSAOCG00000021975	rpusd1	97	83.871	ENSACIG00000015863	rpusd1	100	83.871	Amphilophus_citrinellus
ENSAOCG00000021975	rpusd1	100	99.687	ENSAPEG00000001316	rpusd1	100	99.687	Amphiprion_percula
ENSAOCG00000021975	rpusd1	97	85.484	ENSATEG00000002984	rpusd1	100	85.484	Anabas_testudineus
ENSAOCG00000021975	rpusd1	75	58.921	ENSAPLG00000012316	RPUSD1	98	58.091	Anas_platyrhynchos
ENSAOCG00000021975	rpusd1	95	62.829	ENSACAG00000008953	RPUSD1	99	62.829	Anolis_carolinensis
ENSAOCG00000021975	rpusd1	95	56.066	ENSANAG00000024709	RPUSD1	98	56.066	Aotus_nancymaae
ENSAOCG00000021975	rpusd1	97	83.923	ENSACLG00000013692	rpusd1	100	83.280	Astatotilapia_calliptera
ENSAOCG00000021975	rpusd1	96	67.427	ENSAMXG00000019802	rpusd1	99	66.667	Astyanax_mexicanus
ENSAOCG00000021975	rpusd1	95	58.689	ENSBTAG00000000179	RPUSD1	98	58.689	Bos_taurus
ENSAOCG00000021975	rpusd1	95	56.494	ENSCJAG00000012253	RPUSD1	98	55.738	Callithrix_jacchus
ENSAOCG00000021975	rpusd1	95	57.049	ENSCAFG00000019614	RPUSD1	98	57.705	Canis_familiaris
ENSAOCG00000021975	rpusd1	95	57.049	ENSCAFG00020008891	RPUSD1	98	57.705	Canis_lupus_dingo
ENSAOCG00000021975	rpusd1	95	59.016	ENSCHIG00000012872	RPUSD1	98	59.016	Capra_hircus
ENSAOCG00000021975	rpusd1	95	55.882	ENSTSYG00000036934	RPUSD1	98	55.882	Carlito_syrichta
ENSAOCG00000021975	rpusd1	95	56.066	ENSCAPG00000014219	RPUSD1	98	56.066	Cavia_aperea
ENSAOCG00000021975	rpusd1	95	56.066	ENSCPOG00000034604	RPUSD1	98	56.066	Cavia_porcellus
ENSAOCG00000021975	rpusd1	95	55.738	ENSCCAG00000034385	RPUSD1	98	55.738	Cebus_capucinus
ENSAOCG00000021975	rpusd1	95	56.410	ENSCATG00000042983	RPUSD1	98	56.066	Cercocebus_atys
ENSAOCG00000021975	rpusd1	95	56.066	ENSCLAG00000013966	RPUSD1	83	64.427	Chinchilla_lanigera
ENSAOCG00000021975	rpusd1	95	55.738	ENSCSAG00000012121	RPUSD1	98	55.738	Chlorocebus_sabaeus
ENSAOCG00000021975	rpusd1	95	60.855	ENSCPBG00000021101	RPUSD1	99	60.526	Chrysemys_picta_bellii
ENSAOCG00000021975	rpusd1	79	64.427	ENSCANG00000028576	RPUSD1	90	64.427	Colobus_angolensis_palliatus
ENSAOCG00000021975	rpusd1	95	55.882	ENSCGRG00001014253	Rpusd1	98	55.229	Cricetulus_griseus_chok1gshd
ENSAOCG00000021975	rpusd1	95	55.882	ENSCGRG00000017995	Rpusd1	98	55.229	Cricetulus_griseus_crigri
ENSAOCG00000021975	rpusd1	95	80.921	ENSCSEG00000018512	rpusd1	98	80.921	Cynoglossus_semilaevis
ENSAOCG00000021975	rpusd1	97	81.877	ENSCVAG00000022746	rpusd1	100	80.583	Cyprinodon_variegatus
ENSAOCG00000021975	rpusd1	95	70.395	ENSDARG00000060192	rpusd1	99	68.301	Danio_rerio
ENSAOCG00000021975	rpusd1	95	56.066	ENSDNOG00000003721	RPUSD1	98	56.066	Dasypus_novemcinctus
ENSAOCG00000021975	rpusd1	95	56.066	ENSDORG00000026656	Rpusd1	98	56.066	Dipodomys_ordii
ENSAOCG00000021975	rpusd1	93	45.687	ENSEBUG00000008767	rpusd1	79	50.575	Eptatretus_burgeri
ENSAOCG00000021975	rpusd1	95	56.731	ENSEASG00005018421	RPUSD1	74	56.634	Equus_asinus_asinus
ENSAOCG00000021975	rpusd1	96	71.895	ENSELUG00000014307	rpusd1	89	72.876	Esox_lucius
ENSAOCG00000021975	rpusd1	95	58.033	ENSFCAG00000010359	RPUSD1	98	57.377	Felis_catus
ENSAOCG00000021975	rpusd1	95	63.816	ENSFALG00000003211	RPUSD1	99	62.829	Ficedula_albicollis
ENSAOCG00000021975	rpusd1	95	56.721	ENSFDAG00000013398	RPUSD1	98	56.721	Fukomys_damarensis
ENSAOCG00000021975	rpusd1	97	79.935	ENSFHEG00000004736	rpusd1	100	80.259	Fundulus_heteroclitus
ENSAOCG00000021975	rpusd1	97	73.052	ENSGMOG00000010756	rpusd1	99	73.052	Gadus_morhua
ENSAOCG00000021975	rpusd1	95	61.842	ENSGALG00000005315	RPUSD1	99	62.171	Gallus_gallus
ENSAOCG00000021975	rpusd1	97	81.230	ENSGAFG00000009886	rpusd1	100	81.230	Gambusia_affinis
ENSAOCG00000021975	rpusd1	97	83.819	ENSGACG00000014276	rpusd1	100	83.819	Gasterosteus_aculeatus
ENSAOCG00000021975	rpusd1	95	60.855	ENSGAGG00000004181	RPUSD1	99	60.855	Gopherus_agassizii
ENSAOCG00000021975	rpusd1	95	56.550	ENSGGOG00000013997	RPUSD1	98	56.209	Gorilla_gorilla
ENSAOCG00000021975	rpusd1	97	84.244	ENSHBUG00000023728	rpusd1	100	83.601	Haplochromis_burtoni
ENSAOCG00000021975	rpusd1	95	56.393	ENSHGLG00000002595	RPUSD1	98	56.393	Heterocephalus_glaber_female
ENSAOCG00000021975	rpusd1	95	56.393	ENSHGLG00100014303	RPUSD1	98	56.393	Heterocephalus_glaber_male
ENSAOCG00000021975	rpusd1	96	74.510	ENSHCOG00000002390	rpusd1	99	72.581	Hippocampus_comes
ENSAOCG00000021975	rpusd1	95	65.347	ENSIPUG00000001570	rpusd1	98	64.356	Ictalurus_punctatus
ENSAOCG00000021975	rpusd1	95	56.066	ENSSTOG00000004276	RPUSD1	98	56.066	Ictidomys_tridecemlineatus
ENSAOCG00000021975	rpusd1	95	56.721	ENSJJAG00000015696	Rpusd1	98	56.721	Jaculus_jaculus
ENSAOCG00000021975	rpusd1	97	80.645	ENSKMAG00000017287	rpusd1	100	80.645	Kryptolebias_marmoratus
ENSAOCG00000021975	rpusd1	97	80.968	ENSLBEG00000022502	rpusd1	100	80.968	Labrus_bergylta
ENSAOCG00000021975	rpusd1	97	80.968	ENSLBEG00000013354	RPUSD1	100	80.968	Labrus_bergylta
ENSAOCG00000021975	rpusd1	95	60.855	ENSLACG00000008869	RPUSD1	99	60.197	Latimeria_chalumnae
ENSAOCG00000021975	rpusd1	67	80.374	ENSLOCG00000005682	rpusd1	99	80.374	Lepisosteus_oculatus
ENSAOCG00000021975	rpusd1	95	55.410	ENSLAFG00000002115	RPUSD1	98	55.410	Loxodonta_africana
ENSAOCG00000021975	rpusd1	95	56.410	ENSMFAG00000003961	RPUSD1	98	56.066	Macaca_fascicularis
ENSAOCG00000021975	rpusd1	95	56.410	ENSMMUG00000000842	RPUSD1	98	56.066	Macaca_mulatta
ENSAOCG00000021975	rpusd1	95	56.410	ENSMNEG00000042712	RPUSD1	98	56.066	Macaca_nemestrina
ENSAOCG00000021975	rpusd1	95	56.410	ENSMLEG00000030591	RPUSD1	98	56.066	Mandrillus_leucophaeus
ENSAOCG00000021975	rpusd1	97	87.781	ENSMAMG00000004735	rpusd1	100	87.460	Mastacembelus_armatus
ENSAOCG00000021975	rpusd1	97	83.923	ENSMZEG00005003214	rpusd1	100	83.280	Maylandia_zebra
ENSAOCG00000021975	rpusd1	94	62.126	ENSMGAG00000005447	RPUSD1	99	62.126	Meleagris_gallopavo
ENSAOCG00000021975	rpusd1	79	55.731	ENSMAUG00000019998	Rpusd1	96	55.731	Mesocricetus_auratus
ENSAOCG00000021975	rpusd1	95	55.410	ENSMICG00000017561	RPUSD1	98	55.410	Microcebus_murinus
ENSAOCG00000021975	rpusd1	95	57.377	ENSMOCG00000014082	Rpusd1	98	57.377	Microtus_ochrogaster
ENSAOCG00000021975	rpusd1	96	78.827	ENSMMOG00000012569	rpusd1	99	78.176	Mola_mola
ENSAOCG00000021975	rpusd1	96	62.092	ENSMODG00000016882	RPUSD1	99	61.765	Monodelphis_domestica
ENSAOCG00000021975	rpusd1	97	82.637	ENSMALG00000017818	rpusd1	100	82.315	Monopterus_albus
ENSAOCG00000021975	rpusd1	95	57.377	MGP_CAROLIEiJ_G0021244	Rpusd1	98	57.049	Mus_caroli
ENSAOCG00000021975	rpusd1	95	57.377	ENSMUSG00000041199	Rpusd1	98	57.377	Mus_musculus
ENSAOCG00000021975	rpusd1	95	56.393	MGP_PahariEiJ_G0023562	Rpusd1	98	57.049	Mus_pahari
ENSAOCG00000021975	rpusd1	95	57.377	MGP_SPRETEiJ_G0022155	Rpusd1	98	57.377	Mus_spretus
ENSAOCG00000021975	rpusd1	93	56.667	ENSMPUG00000015897	RPUSD1	96	57.333	Mustela_putorius_furo
ENSAOCG00000021975	rpusd1	95	57.049	ENSMLUG00000001089	RPUSD1	98	57.705	Myotis_lucifugus
ENSAOCG00000021975	rpusd1	95	55.410	ENSNGAG00000003595	Rpusd1	98	55.410	Nannospalax_galili
ENSAOCG00000021975	rpusd1	97	81.350	ENSNBRG00000006457	rpusd1	100	80.906	Neolamprologus_brichardi
ENSAOCG00000021975	rpusd1	52	46.154	ENSNLEG00000008424	-	97	46.154	Nomascus_leucogenys
ENSAOCG00000021975	rpusd1	95	61.613	ENSMEUG00000016049	RPUSD1	98	61.842	Notamacropus_eugenii
ENSAOCG00000021975	rpusd1	95	49.836	ENSOPRG00000008340	RPUSD1	98	49.836	Ochotona_princeps
ENSAOCG00000021975	rpusd1	95	56.393	ENSODEG00000016945	RPUSD1	83	64.032	Octodon_degus
ENSAOCG00000021975	rpusd1	96	84.416	ENSONIG00000015672	rpusd1	100	83.766	Oreochromis_niloticus
ENSAOCG00000021975	rpusd1	97	76.452	ENSORLG00000013009	rpusd1	100	74.920	Oryzias_latipes
ENSAOCG00000021975	rpusd1	97	76.129	ENSORLG00020010382	rpusd1	100	74.516	Oryzias_latipes_hni
ENSAOCG00000021975	rpusd1	97	75.484	ENSORLG00015021354	rpusd1	100	73.955	Oryzias_latipes_hsok
ENSAOCG00000021975	rpusd1	97	76.129	ENSOMEG00000021426	rpusd1	100	75.484	Oryzias_melastigma
ENSAOCG00000021975	rpusd1	95	54.545	ENSOGAG00000003795	RPUSD1	98	54.545	Otolemur_garnettii
ENSAOCG00000021975	rpusd1	95	59.016	ENSOARG00000014254	RPUSD1	98	59.016	Ovis_aries
ENSAOCG00000021975	rpusd1	95	56.090	ENSPPAG00000034797	RPUSD1	98	55.738	Pan_paniscus
ENSAOCG00000021975	rpusd1	95	58.361	ENSPPRG00000012389	RPUSD1	98	57.705	Panthera_pardus
ENSAOCG00000021975	rpusd1	96	57.980	ENSPTIG00000008545	RPUSD1	77	74.257	Panthera_tigris_altaica
ENSAOCG00000021975	rpusd1	95	56.090	ENSPTRG00000007565	RPUSD1	98	55.738	Pan_troglodytes
ENSAOCG00000021975	rpusd1	95	56.410	ENSPANG00000024401	RPUSD1	98	56.066	Papio_anubis
ENSAOCG00000021975	rpusd1	99	69.811	ENSPKIG00000018890	rpusd1	93	69.811	Paramormyrops_kingsleyae
ENSAOCG00000021975	rpusd1	95	63.158	ENSPSIG00000013945	RPUSD1	99	63.158	Pelodiscus_sinensis
ENSAOCG00000021975	rpusd1	97	75.081	ENSPMGG00000014950	rpusd1	99	74.110	Periophthalmus_magnuspinnatus
ENSAOCG00000021975	rpusd1	95	56.066	ENSPEMG00000000497	Rpusd1	98	56.393	Peromyscus_maniculatus_bairdii
ENSAOCG00000021975	rpusd1	96	53.420	ENSPMAG00000001563	rpusd1	99	53.420	Petromyzon_marinus
ENSAOCG00000021975	rpusd1	96	61.765	ENSPCIG00000021216	-	93	61.364	Phascolarctos_cinereus
ENSAOCG00000021975	rpusd1	97	81.877	ENSPFOG00000007946	rpusd1	100	81.877	Poecilia_formosa
ENSAOCG00000021975	rpusd1	97	82.201	ENSPLAG00000011925	rpusd1	100	82.201	Poecilia_latipinna
ENSAOCG00000021975	rpusd1	97	81.877	ENSPMEG00000002910	rpusd1	100	81.877	Poecilia_mexicana
ENSAOCG00000021975	rpusd1	97	82.524	ENSPREG00000019851	rpusd1	100	82.524	Poecilia_reticulata
ENSAOCG00000021975	rpusd1	95	43.279	ENSPCAG00000002258	RPUSD1	98	43.279	Procavia_capensis
ENSAOCG00000021975	rpusd1	95	54.426	ENSPCOG00000022582	RPUSD1	98	54.426	Propithecus_coquereli
ENSAOCG00000021975	rpusd1	95	52.131	ENSPVAG00000013104	RPUSD1	98	52.131	Pteropus_vampyrus
ENSAOCG00000021975	rpusd1	97	84.244	ENSPNYG00000024076	rpusd1	100	83.601	Pundamilia_nyererei
ENSAOCG00000021975	rpusd1	96	65.147	ENSPNAG00000013806	rpusd1	99	65.147	Pygocentrus_nattereri
ENSAOCG00000021975	rpusd1	95	57.377	ENSRNOG00000023639	Rpusd1	98	57.377	Rattus_norvegicus
ENSAOCG00000021975	rpusd1	95	56.410	ENSRBIG00000030238	RPUSD1	98	56.066	Rhinopithecus_bieti
ENSAOCG00000021975	rpusd1	95	56.410	ENSRROG00000036663	RPUSD1	98	56.066	Rhinopithecus_roxellana
ENSAOCG00000021975	rpusd1	95	57.049	ENSSBOG00000033063	RPUSD1	98	57.049	Saimiri_boliviensis_boliviensis
ENSAOCG00000021975	rpusd1	95	60.855	ENSSHAG00000013500	RPUSD1	98	60.784	Sarcophilus_harrisii
ENSAOCG00000021975	rpusd1	95	70.395	ENSSFOG00015014394	rpusd1	99	69.408	Scleropages_formosus
ENSAOCG00000021975	rpusd1	100	86.520	ENSSMAG00000008045	rpusd1	96	86.520	Scophthalmus_maximus
ENSAOCG00000021975	rpusd1	100	87.774	ENSSDUG00000001829	rpusd1	100	87.774	Seriola_dumerili
ENSAOCG00000021975	rpusd1	100	87.774	ENSSLDG00000020853	rpusd1	100	87.774	Seriola_lalandi_dorsalis
ENSAOCG00000021975	rpusd1	52	71.257	ENSSARG00000011187	-	100	71.257	Sorex_araneus
ENSAOCG00000021975	rpusd1	61	56.477	ENSSPUG00000005119	-	98	56.122	Sphenodon_punctatus
ENSAOCG00000021975	rpusd1	97	91.290	ENSSPAG00000012708	rpusd1	100	91.290	Stegastes_partitus
ENSAOCG00000021975	rpusd1	95	57.377	ENSSSCG00000008000	RPUSD1	98	66.142	Sus_scrofa
ENSAOCG00000021975	rpusd1	79	68.924	ENSTGUG00000015375	RPUSD1	99	68.924	Taeniopygia_guttata
ENSAOCG00000021975	rpusd1	97	80.000	ENSTRUG00000003041	rpusd1	99	80.000	Takifugu_rubripes
ENSAOCG00000021975	rpusd1	96	71.895	ENSTNIG00000002660	rpusd1	99	70.915	Tetraodon_nigroviridis
ENSAOCG00000021975	rpusd1	95	57.377	ENSTTRG00000010167	RPUSD1	98	57.377	Tursiops_truncatus
ENSAOCG00000021975	rpusd1	95	56.721	ENSUAMG00000012736	RPUSD1	98	57.049	Ursus_americanus
ENSAOCG00000021975	rpusd1	95	56.721	ENSUMAG00000021174	RPUSD1	91	64.427	Ursus_maritimus
ENSAOCG00000021975	rpusd1	95	57.377	ENSVVUG00000012357	RPUSD1	98	57.705	Vulpes_vulpes
ENSAOCG00000021975	rpusd1	95	62.829	ENSXETG00000007184	rpusd1	98	61.513	Xenopus_tropicalis
ENSAOCG00000021975	rpusd1	97	81.230	ENSXCOG00000017930	rpusd1	100	81.230	Xiphophorus_couchianus
ENSAOCG00000021975	rpusd1	97	81.553	ENSXMAG00000024084	rpusd1	100	81.553	Xiphophorus_maculatus