EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000021993 (Gene tree)
Gene ID: 111585879
Gene Symbol: patl1
Alias: fa11d04|wu:fa11d04|zgc:158239
Full Name: protein PAT1 homolog 1-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 14001 bases
Position: chrNXFZ01004652.1:71995-85995
Accession: 111585879
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000016905	PAT1	PF09770.9	2.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000026017	-	2280	XM_023295509	ENSAOCP00000016905	759 (aa)	XP_023151277	-

Gene Model

Click here to download ENSAOCG00000021993's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000021993's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000021993	patl1	53	35.059	ENSAOCG00000023738	patl2	51	35.279

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000021993	patl1	52	37.931	ENSG00000229474	PATL2	99	38.227	Homo_sapiens
ENSAOCG00000021993	patl1	87	96.413	ENSAPOG00000021290	patl1	93	96.413	Acanthochromis_polyacanthus
ENSAOCG00000021993	patl1	53	36.321	ENSAPOG00000022988	patl2	58	36.111	Acanthochromis_polyacanthus
ENSAOCG00000021993	patl1	52	36.946	ENSAMEG00000014997	PATL2	75	37.028	Ailuropoda_melanoleuca
ENSAOCG00000021993	patl1	88	90.625	ENSACIG00000005182	patl1	91	91.071	Amphilophus_citrinellus
ENSAOCG00000021993	patl1	95	90.281	ENSAPEG00000021391	patl1	94	90.665	Amphiprion_percula
ENSAOCG00000021993	patl1	53	34.752	ENSAPEG00000011299	patl2	61	35.279	Amphiprion_percula
ENSAOCG00000021993	patl1	95	80.695	ENSATEG00000002230	patl1	94	83.075	Anabas_testudineus
ENSAOCG00000021993	patl1	53	35.765	ENSATEG00000019567	patl2	60	36.364	Anabas_testudineus
ENSAOCG00000021993	patl1	64	44.841	ENSAPLG00000013394	PATL1	51	61.355	Anas_platyrhynchos
ENSAOCG00000021993	patl1	51	40.100	ENSAPLG00000003980	PATL2	64	39.798	Anas_platyrhynchos
ENSAOCG00000021993	patl1	95	45.897	ENSACAG00000006607	PATL1	54	53.110	Anolis_carolinensis
ENSAOCG00000021993	patl1	95	82.097	ENSACLG00000005144	patl1	94	81.633	Astatotilapia_calliptera
ENSAOCG00000021993	patl1	53	36.691	ENSACLG00000010326	patl2	53	36.272	Astatotilapia_calliptera
ENSAOCG00000021993	patl1	56	36.703	ENSAMXG00000020293	patl2	57	37.280	Astyanax_mexicanus
ENSAOCG00000021993	patl1	95	78.219	ENSAMXG00000010731	patl1	94	79.041	Astyanax_mexicanus
ENSAOCG00000021993	patl1	95	46.036	ENSCJAG00000016192	PATL1	82	50.000	Callithrix_jacchus
ENSAOCG00000021993	patl1	54	36.150	ENSCJAG00000002379	PATL2	72	36.750	Callithrix_jacchus
ENSAOCG00000021993	patl1	52	37.805	ENSCAFG00000013629	PATL2	72	37.975	Canis_familiaris
ENSAOCG00000021993	patl1	52	37.805	ENSCAFG00020022169	PATL2	72	37.783	Canis_lupus_dingo
ENSAOCG00000021993	patl1	95	46.616	ENSCAFG00020001648	PATL1	94	44.444	Canis_lupus_dingo
ENSAOCG00000021993	patl1	57	37.723	ENSCHIG00000026665	PATL2	74	38.000	Capra_hircus
ENSAOCG00000021993	patl1	52	37.255	ENSTSYG00000032456	PATL2	72	36.386	Carlito_syrichta
ENSAOCG00000021993	patl1	95	45.570	ENSCAPG00000013668	PATL1	53	52.163	Cavia_aperea
ENSAOCG00000021993	patl1	95	44.554	ENSCPOG00000006827	PATL1	53	52.163	Cavia_porcellus
ENSAOCG00000021993	patl1	52	38.177	ENSCATG00000034794	PATL2	99	38.227	Cercocebus_atys
ENSAOCG00000021993	patl1	95	46.056	ENSCLAG00000003427	PATL1	54	53.125	Chinchilla_lanigera
ENSAOCG00000021993	patl1	52	38.177	ENSCSAG00000009601	PATL2	72	38.346	Chlorocebus_sabaeus
ENSAOCG00000021993	patl1	79	49.924	ENSCSAG00000006095	PATL1	60	52.885	Chlorocebus_sabaeus
ENSAOCG00000021993	patl1	65	57.000	ENSCHOG00000001611	PATL1	82	57.000	Choloepus_hoffmanni
ENSAOCG00000021993	patl1	55	38.084	ENSCPBG00000006150	PATL2	59	39.348	Chrysemys_picta_bellii
ENSAOCG00000021993	patl1	52	37.717	ENSCANG00000013856	PATL2	72	37.879	Colobus_angolensis_palliatus
ENSAOCG00000021993	patl1	95	47.187	ENSCGRG00001024927	Patl1	54	53.606	Cricetulus_griseus_chok1gshd
ENSAOCG00000021993	patl1	95	47.187	ENSCGRG00000000461	Patl1	54	53.606	Cricetulus_griseus_crigri
ENSAOCG00000021993	patl1	95	77.399	ENSCSEG00000008261	patl1	95	85.503	Cynoglossus_semilaevis
ENSAOCG00000021993	patl1	53	34.043	ENSCSEG00000009438	patl2	55	33.854	Cynoglossus_semilaevis
ENSAOCG00000021993	patl1	53	34.048	ENSCVAG00000016203	patl2	60	34.351	Cyprinodon_variegatus
ENSAOCG00000021993	patl1	87	77.253	ENSCVAG00000006664	patl1	87	74.446	Cyprinodon_variegatus
ENSAOCG00000021993	patl1	95	75.650	ENSDARG00000017423	patl1	95	74.627	Danio_rerio
ENSAOCG00000021993	patl1	51	39.043	ENSDARG00000089567	patl2	55	39.086	Danio_rerio
ENSAOCG00000021993	patl1	53	36.893	ENSDNOG00000036837	PATL2	66	37.186	Dasypus_novemcinctus
ENSAOCG00000021993	patl1	95	41.985	ENSDNOG00000038865	PATL1	75	52.163	Dasypus_novemcinctus
ENSAOCG00000021993	patl1	55	35.484	ENSEASG00005017984	PATL2	70	36.132	Equus_asinus_asinus
ENSAOCG00000021993	patl1	95	46.046	ENSEASG00005007963	PATL1	94	43.536	Equus_asinus_asinus
ENSAOCG00000021993	patl1	55	36.239	ENSECAG00000013462	PATL2	71	36.962	Equus_caballus
ENSAOCG00000021993	patl1	63	34.455	ENSELUG00000023244	patl2	54	36.524	Esox_lucius
ENSAOCG00000021993	patl1	95	76.573	ENSELUG00000024249	patl1	93	77.018	Esox_lucius
ENSAOCG00000021993	patl1	54	37.767	ENSFCAG00000027170	PATL2	72	38.228	Felis_catus
ENSAOCG00000021993	patl1	64	34.257	ENSFALG00000009768	PATL2	55	36.709	Ficedula_albicollis
ENSAOCG00000021993	patl1	95	48.210	ENSFALG00000012150	PATL1	54	55.448	Ficedula_albicollis
ENSAOCG00000021993	patl1	95	45.908	ENSFDAG00000016128	PATL1	94	39.899	Fukomys_damarensis
ENSAOCG00000021993	patl1	95	80.840	ENSFHEG00000017790	patl1	95	81.144	Fundulus_heteroclitus
ENSAOCG00000021993	patl1	53	36.092	ENSGMOG00000005666	patl2	98	36.318	Gadus_morhua
ENSAOCG00000021993	patl1	95	46.598	ENSGALG00000042641	PATL1	55	54.348	Gallus_gallus
ENSAOCG00000021993	patl1	95	81.722	ENSGAFG00000006508	patl1	94	81.555	Gambusia_affinis
ENSAOCG00000021993	patl1	53	36.407	ENSGAFG00000019344	patl2	55	36.456	Gambusia_affinis
ENSAOCG00000021993	patl1	95	76.862	ENSGACG00000016448	patl1	53	94.872	Gasterosteus_aculeatus
ENSAOCG00000021993	patl1	95	46.743	ENSGAGG00000004461	PATL1	94	44.444	Gopherus_agassizii
ENSAOCG00000021993	patl1	52	37.931	ENSGGOG00000025923	PATL2	71	38.095	Gorilla_gorilla
ENSAOCG00000021993	patl1	95	82.225	ENSHBUG00000005365	patl1	94	81.633	Haplochromis_burtoni
ENSAOCG00000021993	patl1	53	36.779	ENSHBUG00000005929	patl2	60	36.776	Haplochromis_burtoni
ENSAOCG00000021993	patl1	79	50.076	ENSHGLG00100003453	PATL1	55	51.442	Heterocephalus_glaber_male
ENSAOCG00000021993	patl1	95	77.721	ENSHCOG00000001898	patl1	98	76.834	Hippocampus_comes
ENSAOCG00000021993	patl1	53	36.235	ENSHCOG00000016754	patl2	54	35.768	Hippocampus_comes
ENSAOCG00000021993	patl1	51	38.095	ENSIPUG00000020692	patl2	56	37.280	Ictalurus_punctatus
ENSAOCG00000021993	patl1	57	36.343	ENSSTOG00000033848	PATL2	71	37.845	Ictidomys_tridecemlineatus
ENSAOCG00000021993	patl1	95	45.780	ENSJJAG00000010135	Patl1	54	52.404	Jaculus_jaculus
ENSAOCG00000021993	patl1	51	35.279	ENSKMAG00000021275	patl2	54	34.264	Kryptolebias_marmoratus
ENSAOCG00000021993	patl1	95	81.050	ENSKMAG00000020848	patl1	94	82.248	Kryptolebias_marmoratus
ENSAOCG00000021993	patl1	95	83.777	ENSLBEG00000023617	patl1	94	83.822	Labrus_bergylta
ENSAOCG00000021993	patl1	53	36.706	ENSLBEG00000022344	patl2	52	36.869	Labrus_bergylta
ENSAOCG00000021993	patl1	95	46.632	ENSLACG00000004640	PATL1	56	54.657	Latimeria_chalumnae
ENSAOCG00000021993	patl1	51	36.790	ENSLACG00000005291	-	52	35.980	Latimeria_chalumnae
ENSAOCG00000021993	patl1	95	65.737	ENSLOCG00000000717	patl1	94	64.199	Lepisosteus_oculatus
ENSAOCG00000021993	patl1	95	46.479	ENSLAFG00000015161	PATL1	54	53.735	Loxodonta_africana
ENSAOCG00000021993	patl1	52	38.177	ENSMNEG00000034510	PATL2	72	38.346	Macaca_nemestrina
ENSAOCG00000021993	patl1	52	38.177	ENSMLEG00000042248	PATL2	71	38.346	Mandrillus_leucophaeus
ENSAOCG00000021993	patl1	53	35.437	ENSMAMG00000013327	patl2	60	35.949	Mastacembelus_armatus
ENSAOCG00000021993	patl1	95	85.832	ENSMAMG00000003950	patl1	94	86.107	Mastacembelus_armatus
ENSAOCG00000021993	patl1	53	36.691	ENSMZEG00005014292	patl2	53	36.272	Maylandia_zebra
ENSAOCG00000021993	patl1	95	82.398	ENSMZEG00005013404	patl1	94	81.458	Maylandia_zebra
ENSAOCG00000021993	patl1	88	45.983	ENSMGAG00000003406	PATL1	52	53.846	Meleagris_gallopavo
ENSAOCG00000021993	patl1	57	37.013	ENSMGAG00000001309	PATL2	64	38.213	Meleagris_gallopavo
ENSAOCG00000021993	patl1	95	42.283	ENSMAUG00000012059	Patl1	84	46.135	Mesocricetus_auratus
ENSAOCG00000021993	patl1	53	36.186	ENSMAUG00000001008	Patl2	75	36.869	Mesocricetus_auratus
ENSAOCG00000021993	patl1	52	36.816	ENSMOCG00000015367	Patl2	72	37.047	Microtus_ochrogaster
ENSAOCG00000021993	patl1	82	85.366	ENSMMOG00000013711	patl1	84	85.217	Mola_mola
ENSAOCG00000021993	patl1	95	47.315	ENSMODG00000020201	PATL1	54	54.808	Monodelphis_domestica
ENSAOCG00000021993	patl1	57	36.842	ENSMODG00000017690	PATL2	71	36.829	Monodelphis_domestica
ENSAOCG00000021993	patl1	51	36.456	ENSMALG00000008131	patl2	51	35.787	Monopterus_albus
ENSAOCG00000021993	patl1	94	81.163	ENSMALG00000018706	patl1	93	94.901	Monopterus_albus
ENSAOCG00000021993	patl1	53	37.081	ENSNBRG00000011745	patl2	57	37.186	Neolamprologus_brichardi
ENSAOCG00000021993	patl1	59	93.939	ENSNBRG00000015372	patl1	69	93.939	Neolamprologus_brichardi
ENSAOCG00000021993	patl1	52	37.931	ENSNLEG00000005673	PATL2	72	38.095	Nomascus_leucogenys
ENSAOCG00000021993	patl1	95	44.877	ENSNLEG00000013081	PATL1	56	52.885	Nomascus_leucogenys
ENSAOCG00000021993	patl1	62	56.410	ENSMEUG00000009391	PATL1	73	55.696	Notamacropus_eugenii
ENSAOCG00000021993	patl1	67	53.904	ENSOPRG00000007963	PATL1	75	55.858	Ochotona_princeps
ENSAOCG00000021993	patl1	71	46.531	ENSODEG00000001792	PATL1	83	46.531	Octodon_degus
ENSAOCG00000021993	patl1	95	82.074	ENSONIG00000004170	patl1	94	81.434	Oreochromis_niloticus
ENSAOCG00000021993	patl1	51	36.776	ENSONIG00000011519	patl2	53	35.768	Oreochromis_niloticus
ENSAOCG00000021993	patl1	50	55.890	ENSOANG00000011117	-	89	58.856	Ornithorhynchus_anatinus
ENSAOCG00000021993	patl1	95	46.419	ENSOCUG00000002156	PATL1	54	53.125	Oryctolagus_cuniculus
ENSAOCG00000021993	patl1	56	34.968	ENSOCUG00000006339	PATL2	75	36.524	Oryctolagus_cuniculus
ENSAOCG00000021993	patl1	53	36.066	ENSORLG00000005780	patl2	54	36.111	Oryzias_latipes
ENSAOCG00000021993	patl1	53	36.066	ENSORLG00020016506	patl2	52	36.111	Oryzias_latipes_hni
ENSAOCG00000021993	patl1	53	36.066	ENSORLG00015014500	patl2	54	36.111	Oryzias_latipes_hsok
ENSAOCG00000021993	patl1	95	73.486	ENSORLG00015022240	patl1	95	72.446	Oryzias_latipes_hsok
ENSAOCG00000021993	patl1	52	36.275	ENSOMEG00000021628	patl2	56	35.787	Oryzias_melastigma
ENSAOCG00000021993	patl1	52	37.129	ENSOGAG00000004709	PATL2	72	37.405	Otolemur_garnettii
ENSAOCG00000021993	patl1	55	36.301	ENSOARG00000003762	PATL2	72	36.802	Ovis_aries
ENSAOCG00000021993	patl1	52	37.931	ENSPPAG00000007221	PATL2	71	38.095	Pan_paniscus
ENSAOCG00000021993	patl1	52	37.255	ENSPPRG00000004279	PATL2	72	37.468	Panthera_pardus
ENSAOCG00000021993	patl1	52	37.255	ENSPTIG00000018964	PATL2	72	37.468	Panthera_tigris_altaica
ENSAOCG00000021993	patl1	52	37.931	ENSPTRG00000041536	PATL2	71	38.095	Pan_troglodytes
ENSAOCG00000021993	patl1	95	43.152	ENSPTRG00000003697	PATL1	93	37.339	Pan_troglodytes
ENSAOCG00000021993	patl1	52	38.177	ENSPANG00000018026	PATL2	72	38.346	Papio_anubis
ENSAOCG00000021993	patl1	96	77.112	ENSPKIG00000016224	patl1	98	75.543	Paramormyrops_kingsleyae
ENSAOCG00000021993	patl1	51	38.404	ENSPKIG00000016887	patl2	54	37.656	Paramormyrops_kingsleyae
ENSAOCG00000021993	patl1	95	47.698	ENSPSIG00000016206	PATL1	52	54.197	Pelodiscus_sinensis
ENSAOCG00000021993	patl1	51	35.516	ENSPSIG00000017690	PATL2	96	34.794	Pelodiscus_sinensis
ENSAOCG00000021993	patl1	95	82.609	ENSPMGG00000002644	patl1	94	81.522	Periophthalmus_magnuspinnatus
ENSAOCG00000021993	patl1	53	34.442	ENSPMGG00000014550	patl2	62	34.848	Periophthalmus_magnuspinnatus
ENSAOCG00000021993	patl1	95	47.059	ENSPEMG00000014215	Patl1	54	53.125	Peromyscus_maniculatus_bairdii
ENSAOCG00000021993	patl1	50	37.659	ENSPEMG00000016509	Patl2	67	37.989	Peromyscus_maniculatus_bairdii
ENSAOCG00000021993	patl1	95	46.895	ENSPCIG00000010852	PATL1	54	54.436	Phascolarctos_cinereus
ENSAOCG00000021993	patl1	52	37.226	ENSPCIG00000018256	PATL2	76	36.923	Phascolarctos_cinereus
ENSAOCG00000021993	patl1	51	37.215	ENSPFOG00000007305	patl2	54	36.203	Poecilia_formosa
ENSAOCG00000021993	patl1	95	82.768	ENSPFOG00000007768	patl1	94	83.973	Poecilia_formosa
ENSAOCG00000021993	patl1	95	80.971	ENSPLAG00000018465	patl1	94	82.034	Poecilia_latipinna
ENSAOCG00000021993	patl1	51	37.215	ENSPLAG00000020713	patl2	54	36.203	Poecilia_latipinna
ENSAOCG00000021993	patl1	51	37.215	ENSPMEG00000018942	patl2	54	36.203	Poecilia_mexicana
ENSAOCG00000021993	patl1	95	81.192	ENSPMEG00000006555	patl1	94	81.638	Poecilia_mexicana
ENSAOCG00000021993	patl1	84	78.994	ENSPREG00000003874	patl1	90	78.676	Poecilia_reticulata
ENSAOCG00000021993	patl1	52	38.875	ENSPCOG00000000295	PATL2	99	39.945	Propithecus_coquereli
ENSAOCG00000021993	patl1	95	46.164	ENSPCOG00000020770	PATL1	56	53.125	Propithecus_coquereli
ENSAOCG00000021993	patl1	79	48.392	ENSPVAG00000015239	PATL1	62	50.367	Pteropus_vampyrus
ENSAOCG00000021993	patl1	80	95.912	ENSPNYG00000018936	patl1	87	95.912	Pundamilia_nyererei
ENSAOCG00000021993	patl1	53	36.538	ENSPNYG00000017381	patl2	60	36.524	Pundamilia_nyererei
ENSAOCG00000021993	patl1	53	37.793	ENSPNAG00000002315	patl2	57	38.095	Pygocentrus_nattereri
ENSAOCG00000021993	patl1	95	78.367	ENSPNAG00000017907	patl1	94	78.202	Pygocentrus_nattereri
ENSAOCG00000021993	patl1	95	40.441	ENSRBIG00000032263	PATL1	84	42.697	Rhinopithecus_bieti
ENSAOCG00000021993	patl1	95	46.776	ENSSHAG00000004309	PATL1	54	54.676	Sarcophilus_harrisii
ENSAOCG00000021993	patl1	95	75.307	ENSSFOG00015009614	patl1	94	73.770	Scleropages_formosus
ENSAOCG00000021993	patl1	51	39.454	ENSSFOG00015000720	patl2	55	39.206	Scleropages_formosus
ENSAOCG00000021993	patl1	53	35.952	ENSSMAG00000017262	patl2	63	35.787	Scophthalmus_maximus
ENSAOCG00000021993	patl1	95	80.838	ENSSMAG00000009482	patl1	94	81.091	Scophthalmus_maximus
ENSAOCG00000021993	patl1	95	81.203	ENSSDUG00000005362	patl1	95	81.635	Seriola_dumerili
ENSAOCG00000021993	patl1	53	36.321	ENSSDUG00000022927	patl2	53	36.203	Seriola_dumerili
ENSAOCG00000021993	patl1	95	80.803	ENSSLDG00000019146	patl1	95	81.108	Seriola_lalandi_dorsalis
ENSAOCG00000021993	patl1	53	36.967	ENSSLDG00000017922	patl2	59	37.280	Seriola_lalandi_dorsalis
ENSAOCG00000021993	patl1	61	51.619	ENSSARG00000009600	PATL1	54	54.327	Sorex_araneus
ENSAOCG00000021993	patl1	95	48.134	ENSSPUG00000009453	PATL1	55	56.220	Sphenodon_punctatus
ENSAOCG00000021993	patl1	87	95.815	ENSSPAG00000003187	patl1	88	95.815	Stegastes_partitus
ENSAOCG00000021993	patl1	53	35.714	ENSSPAG00000004784	patl2	61	36.020	Stegastes_partitus
ENSAOCG00000021993	patl1	95	46.232	ENSSSCG00000013124	PATL1	93	47.861	Sus_scrofa
ENSAOCG00000021993	patl1	50	34.860	ENSTGUG00000004619	-	99	34.694	Taeniopygia_guttata
ENSAOCG00000021993	patl1	95	47.570	ENSTGUG00000006222	PATL1	54	55.825	Taeniopygia_guttata
ENSAOCG00000021993	patl1	95	75.069	ENSTRUG00000000709	patl1	94	73.407	Takifugu_rubripes
ENSAOCG00000021993	patl1	51	34.860	ENSTRUG00000005647	patl2	56	34.949	Takifugu_rubripes
ENSAOCG00000021993	patl1	85	41.406	ENSTBEG00000000796	PATL1	63	41.406	Tupaia_belangeri
ENSAOCG00000021993	patl1	71	53.401	ENSTTRG00000009389	PATL1	79	55.586	Tursiops_truncatus
ENSAOCG00000021993	patl1	52	36.919	ENSUAMG00000018533	PATL2	71	37.000	Ursus_americanus
ENSAOCG00000021993	patl1	95	46.360	ENSUMAG00000018634	PATL1	97	43.122	Ursus_maritimus
ENSAOCG00000021993	patl1	52	36.919	ENSUMAG00000007738	PATL2	71	37.000	Ursus_maritimus
ENSAOCG00000021993	patl1	52	37.805	ENSVVUG00000011576	PATL2	72	37.975	Vulpes_vulpes
ENSAOCG00000021993	patl1	95	46.616	ENSVVUG00000016668	PATL1	94	44.444	Vulpes_vulpes
ENSAOCG00000021993	patl1	51	38.131	ENSXETG00000014167	patl2	65	37.722	Xenopus_tropicalis
ENSAOCG00000021993	patl1	65	85.230	ENSXCOG00000010808	patl1	88	84.600	Xiphophorus_couchianus
ENSAOCG00000021993	patl1	95	80.446	ENSXMAG00000013834	patl1	94	81.102	Xiphophorus_maculatus
ENSAOCG00000021993	patl1	51	37.215	ENSXMAG00000018464	patl2	54	36.203	Xiphophorus_maculatus