EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000022002 (Gene tree)
Gene ID: 111563937
Gene Symbol: -
Alias: -
Full Name: elongation factor 1-alpha
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 1706 bases
Position: chrNXFZ01006289.1:246785-248490
Accession: 111563937
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000016983	GTP_EFTU	PF00009.27	1.5e-38	1	1
ENSAOCP00000016983	GTP_EFTU_D2	PF03144.25	1.2e-14	1	1
ENSAOCP00000016983	GTP_EFTU_D3	PF03143.17	4.1e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000026123	-	1242	XM_023263215	ENSAOCP00000016983	413 (aa)	XP_023118983	-

Gene Model

Click here to download ENSAOCG00000022002's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000022002's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000022002	-	100	87.198	ENSAOCG00000012886	eef1a1b	87	87.871
ENSAOCG00000022002	-	95	36.962	ENSAOCG00000020972	-	65	36.962
ENSAOCG00000022002	-	100	90.821	ENSAOCG00000022025	-	87	91.750
ENSAOCG00000022002	-	100	92.736	ENSAOCG00000022039	-	87	93.300
ENSAOCG00000022002	-	100	86.473	ENSAOCG00000001055	-	87	86.881
ENSAOCG00000022002	-	99	68.780	ENSAOCG00000002663	si:dkey-37o8.1	87	69.424
ENSAOCG00000022002	-	96	36.776	ENSAOCG00000016342	gspt1l	79	36.776

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000022002	-	100	94.915	ENSAPOG00000004714	-	89	94.915	Acanthochromis_polyacanthus
ENSAOCG00000022002	-	100	95.157	ENSACIG00000001219	-	97	95.285	Amphilophus_citrinellus
ENSAOCG00000022002	-	100	93.462	ENSAPEG00000016361	-	87	94.045	Amphiprion_percula
ENSAOCG00000022002	-	98	96.030	ENSATEG00000003244	-	85	96.030	Anabas_testudineus
ENSAOCG00000022002	-	100	94.189	ENSACLG00000022560	-	87	94.293	Astatotilapia_calliptera
ENSAOCG00000022002	-	100	81.643	WBGene00001168	eef-1A.1	87	82.178	Caenorhabditis_elegans
ENSAOCG00000022002	-	100	81.643	WBGene00001169	eef-1A.2	87	82.178	Caenorhabditis_elegans
ENSAOCG00000022002	-	98	79.064	ENSCING00000018894	-	87	79.064	Ciona_intestinalis
ENSAOCG00000022002	-	100	76.794	ENSCING00000007703	-	87	76.961	Ciona_intestinalis
ENSAOCG00000022002	-	99	83.010	ENSCING00000021478	-	88	83.623	Ciona_intestinalis
ENSAOCG00000022002	-	98	79.361	ENSCING00000005126	-	88	79.361	Ciona_intestinalis
ENSAOCG00000022002	-	98	79.462	ENSCSAVG00000003196	-	87	79.462	Ciona_savignyi
ENSAOCG00000022002	-	98	80.788	ENSCSAVG00000009663	-	87	80.788	Ciona_savignyi
ENSAOCG00000022002	-	99	82.885	ENSCSAVG00000006357	-	78	94.118	Ciona_savignyi
ENSAOCG00000022002	-	99	75.243	ENSCSAVG00000001085	-	79	76.441	Ciona_savignyi
ENSAOCG00000022002	-	98	94.541	ENSCSEG00000008011	-	87	94.541	Cynoglossus_semilaevis
ENSAOCG00000022002	-	100	85.266	ENSCSEG00000007972	-	98	85.644	Cynoglossus_semilaevis
ENSAOCG00000022002	-	99	85.437	ENSCSEG00000007992	-	97	85.608	Cynoglossus_semilaevis
ENSAOCG00000022002	-	98	95.782	ENSCVAG00000019356	-	87	95.782	Cyprinodon_variegatus
ENSAOCG00000022002	-	98	85.149	FBgn0000557	eEF1alpha2	87	85.149	Drosophila_melanogaster
ENSAOCG00000022002	-	100	85.507	FBgn0284245	eEF1alpha1	86	86.000	Drosophila_melanogaster
ENSAOCG00000022002	-	99	81.068	ENSEBUG00000015814	-	88	81.638	Eptatretus_burgeri
ENSAOCG00000022002	-	98	96.278	ENSFHEG00000015054	-	87	96.278	Fundulus_heteroclitus
ENSAOCG00000022002	-	98	94.789	ENSGAFG00000014646	-	87	94.789	Gambusia_affinis
ENSAOCG00000022002	-	98	95.037	ENSGACG00000002182	-	87	95.037	Gasterosteus_aculeatus
ENSAOCG00000022002	-	100	92.494	ENSGACG00000002143	-	87	92.804	Gasterosteus_aculeatus
ENSAOCG00000022002	-	61	92.460	ENSHBUG00000017166	-	91	92.562	Haplochromis_burtoni
ENSAOCG00000022002	-	99	84.746	ENSHCOG00000008489	-	85	86.041	Hippocampus_comes
ENSAOCG00000022002	-	98	95.533	ENSHCOG00000008468	-	87	95.533	Hippocampus_comes
ENSAOCG00000022002	-	99	83.010	ENSLBEG00000002955	-	88	83.127	Labrus_bergylta
ENSAOCG00000022002	-	98	94.789	ENSLBEG00000002759	-	87	94.789	Labrus_bergylta
ENSAOCG00000022002	-	100	96.368	ENSMAMG00000007715	-	90	96.368	Mastacembelus_armatus
ENSAOCG00000022002	-	98	94.541	ENSMMOG00000001165	-	97	94.286	Mola_mola
ENSAOCG00000022002	-	99	74.817	ENSMMOG00000018160	-	97	75.196	Mola_mola
ENSAOCG00000022002	-	99	85.922	ENSMMOG00000001106	-	87	86.352	Mola_mola
ENSAOCG00000022002	-	86	93.503	ENSNBRG00000017346	-	79	93.605	Neolamprologus_brichardi
ENSAOCG00000022002	-	74	91.447	ENSONIG00000017760	-	85	91.447	Oreochromis_niloticus
ENSAOCG00000022002	-	98	96.030	ENSORLG00000007614	eef1a	87	96.030	Oryzias_latipes
ENSAOCG00000022002	-	100	94.699	ENSORLG00015002397	-	87	96.278	Oryzias_latipes_hsok
ENSAOCG00000022002	-	100	96.368	ENSOMEG00000018226	-	90	96.368	Oryzias_melastigma
ENSAOCG00000022002	-	98	95.050	ENSPMGG00000023911	-	89	95.037	Periophthalmus_magnuspinnatus
ENSAOCG00000022002	-	98	49.507	ENSPMGG00000022427	-	80	72.340	Periophthalmus_magnuspinnatus
ENSAOCG00000022002	-	98	94.789	ENSPFOG00000003924	-	98	94.789	Poecilia_formosa
ENSAOCG00000022002	-	98	94.789	ENSPLAG00000004316	-	87	94.789	Poecilia_latipinna
ENSAOCG00000022002	-	98	95.037	ENSPMEG00000001010	-	87	95.037	Poecilia_mexicana
ENSAOCG00000022002	-	100	92.995	ENSPREG00000008243	-	87	94.789	Poecilia_reticulata
ENSAOCG00000022002	-	100	94.189	ENSPNYG00000007263	-	87	94.293	Pundamilia_nyererei
ENSAOCG00000022002	-	96	78.589	YPR080W	TEF1	88	77.916	Saccharomyces_cerevisiae
ENSAOCG00000022002	-	96	78.589	YBR118W	TEF2	88	77.916	Saccharomyces_cerevisiae
ENSAOCG00000022002	-	59	93.852	ENSSMAG00000016277	-	96	93.852	Scophthalmus_maximus
ENSAOCG00000022002	-	98	82.824	ENSSMAG00000018469	-	88	82.824	Scophthalmus_maximus
ENSAOCG00000022002	-	100	96.368	ENSSDUG00000008198	-	90	96.368	Seriola_dumerili
ENSAOCG00000022002	-	98	92.804	ENSSPAG00000001710	-	87	92.804	Stegastes_partitus
ENSAOCG00000022002	-	98	95.037	ENSTRUG00000005727	ef-1a	87	95.037	Takifugu_rubripes
ENSAOCG00000022002	-	99	86.165	ENSTRUG00000005066	-	87	86.600	Takifugu_rubripes
ENSAOCG00000022002	-	99	81.068	ENSTNIG00000002617	-	84	82.836	Tetraodon_nigroviridis
ENSAOCG00000022002	-	98	95.782	ENSTNIG00000002619	-	87	95.782	Tetraodon_nigroviridis
ENSAOCG00000022002	-	98	94.789	ENSXCOG00000001542	-	88	94.472	Xiphophorus_couchianus