EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000022039 (Gene tree)
Gene ID: 111563925
Gene Symbol: -
Alias: -
Full Name: elongation factor 1-alpha-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 6957 bases
Position: chrNXFZ01006289.1:229017-235973
Accession: 111563925
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000030829	GTP_EFTU	PF00009.27	2.9e-53	1	1
ENSAOCP00000030829	GTP_EFTU_D2	PF03144.25	4.5e-14	1	1
ENSAOCP00000030829	GTP_EFTU_D3	PF03143.17	1.3e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000026175	-	1759	XM_023263200	ENSAOCP00000030829	461 (aa)	XP_023118968	UPI000C312DA8

Gene Model

Click here to download ENSAOCG00000022039's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000022039's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000022039	-	100	87.879	ENSAOCG00000012886	eef1a1b	100	87.879
ENSAOCG00000022039	-	87	93.300	ENSAOCG00000022002	-	100	92.736
ENSAOCG00000022039	-	96	39.729	ENSAOCG00000016342	gspt1l	87	39.729
ENSAOCG00000022039	-	100	92.208	ENSAOCG00000022025	-	100	92.208
ENSAOCG00000022039	-	99	70.742	ENSAOCG00000002663	si:dkey-37o8.1	99	70.742
ENSAOCG00000022039	-	100	87.879	ENSAOCG00000001055	-	100	87.879
ENSAOCG00000022039	-	96	39.189	ENSAOCG00000020972	-	73	39.278

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000022039	-	98	90.244	ENSAPOG00000004714	-	100	89.805	Acanthochromis_polyacanthus
ENSAOCG00000022039	-	90	91.768	ENSACIG00000001219	-	99	91.768	Amphilophus_citrinellus
ENSAOCG00000022039	-	100	98.915	ENSAPEG00000016361	-	100	98.915	Amphiprion_percula
ENSAOCG00000022039	-	98	91.796	ENSATEG00000003244	-	97	91.323	Anabas_testudineus
ENSAOCG00000022039	-	100	90.672	ENSACLG00000022560	-	99	90.672	Astatotilapia_calliptera
ENSAOCG00000022039	-	100	82.900	WBGene00001168	eef-1A.1	99	82.900	Caenorhabditis_elegans
ENSAOCG00000022039	-	100	82.900	WBGene00001169	eef-1A.2	99	82.900	Caenorhabditis_elegans
ENSAOCG00000022039	-	99	82.751	ENSCING00000021478	-	99	82.751	Ciona_intestinalis
ENSAOCG00000022039	-	98	79.780	ENSCING00000005126	-	100	79.785	Ciona_intestinalis
ENSAOCG00000022039	-	98	79.956	ENSCING00000018894	-	99	79.957	Ciona_intestinalis
ENSAOCG00000022039	-	100	78.326	ENSCING00000007703	-	99	78.326	Ciona_intestinalis
ENSAOCG00000022039	-	98	79.956	ENSCSAVG00000003196	-	100	79.957	Ciona_savignyi
ENSAOCG00000022039	-	99	83.370	ENSCSAVG00000006357	-	98	92.000	Ciona_savignyi
ENSAOCG00000022039	-	98	81.538	ENSCSAVG00000009663	-	100	81.505	Ciona_savignyi
ENSAOCG00000022039	-	99	76.688	ENSCSAVG00000001085	-	91	76.688	Ciona_savignyi
ENSAOCG00000022039	-	98	91.131	ENSCSEG00000008011	-	100	90.672	Cynoglossus_semilaevis
ENSAOCG00000022039	-	89	84.951	ENSCSEG00000007992	-	99	84.951	Cynoglossus_semilaevis
ENSAOCG00000022039	-	90	85.266	ENSCSEG00000007972	-	100	85.266	Cynoglossus_semilaevis
ENSAOCG00000022039	-	98	91.353	ENSCVAG00000019356	-	100	90.889	Cyprinodon_variegatus
ENSAOCG00000022039	-	98	85.398	FBgn0000557	eEF1alpha2	100	85.065	Drosophila_melanogaster
ENSAOCG00000022039	-	100	84.632	FBgn0284245	eEF1alpha1	99	84.632	Drosophila_melanogaster
ENSAOCG00000022039	-	99	82.609	ENSEBUG00000015814	-	100	82.609	Eptatretus_burgeri
ENSAOCG00000022039	-	100	91.558	ENSFHEG00000015054	-	100	91.558	Fundulus_heteroclitus
ENSAOCG00000022039	-	98	90.687	ENSGAFG00000014646	-	100	90.239	Gambusia_affinis
ENSAOCG00000022039	-	98	91.574	ENSGACG00000002182	-	100	91.106	Gasterosteus_aculeatus
ENSAOCG00000022039	-	100	88.286	ENSGACG00000002143	-	100	88.286	Gasterosteus_aculeatus
ENSAOCG00000022039	-	55	87.747	ENSHBUG00000017166	-	95	87.747	Haplochromis_burtoni
ENSAOCG00000022039	-	98	90.909	ENSHCOG00000008468	-	100	90.456	Hippocampus_comes
ENSAOCG00000022039	-	99	85.466	ENSHCOG00000008489	-	100	85.466	Hippocampus_comes
ENSAOCG00000022039	-	99	83.913	ENSLBEG00000002955	-	100	83.913	Labrus_bergylta
ENSAOCG00000022039	-	98	90.909	ENSLBEG00000002759	-	100	90.456	Labrus_bergylta
ENSAOCG00000022039	-	98	91.574	ENSMAMG00000007715	-	100	91.106	Mastacembelus_armatus
ENSAOCG00000022039	-	99	86.304	ENSMMOG00000001106	-	99	86.304	Mola_mola
ENSAOCG00000022039	-	98	90.466	ENSMMOG00000001165	-	100	94.318	Mola_mola
ENSAOCG00000022039	-	99	76.974	ENSMMOG00000018160	-	99	89.130	Mola_mola
ENSAOCG00000022039	-	100	79.826	ENSNBRG00000017346	-	99	79.826	Neolamprologus_brichardi
ENSAOCG00000022039	-	76	88.636	ENSONIG00000017760	-	98	88.636	Oreochromis_niloticus
ENSAOCG00000022039	-	98	92.239	ENSORLG00000007614	eef1a	100	91.757	Oryzias_latipes
ENSAOCG00000022039	-	100	92.225	ENSORLG00015002397	-	100	92.225	Oryzias_latipes_hsok
ENSAOCG00000022039	-	98	91.353	ENSOMEG00000018226	-	100	90.889	Oryzias_melastigma
ENSAOCG00000022039	-	95	50.114	ENSPMGG00000022427	-	96	61.250	Periophthalmus_magnuspinnatus
ENSAOCG00000022039	-	98	93.348	ENSPMGG00000023911	-	100	97.674	Periophthalmus_magnuspinnatus
ENSAOCG00000022039	-	98	90.466	ENSPFOG00000003924	-	100	89.588	Poecilia_formosa
ENSAOCG00000022039	-	98	90.466	ENSPLAG00000004316	-	100	90.022	Poecilia_latipinna
ENSAOCG00000022039	-	98	90.687	ENSPMEG00000001010	-	100	90.239	Poecilia_mexicana
ENSAOCG00000022039	-	100	91.342	ENSPREG00000008243	-	100	91.342	Poecilia_reticulata
ENSAOCG00000022039	-	100	90.672	ENSPNYG00000007263	-	99	90.672	Pundamilia_nyererei
ENSAOCG00000022039	-	97	79.551	YBR118W	TEF2	100	79.130	Saccharomyces_cerevisiae
ENSAOCG00000022039	-	97	79.551	YPR080W	TEF1	100	79.130	Saccharomyces_cerevisiae
ENSAOCG00000022039	-	53	89.344	ENSSMAG00000016277	-	100	88.583	Scophthalmus_maximus
ENSAOCG00000022039	-	98	82.241	ENSSMAG00000018469	-	100	81.988	Scophthalmus_maximus
ENSAOCG00000022039	-	98	92.018	ENSSDUG00000008198	-	100	91.540	Seriola_dumerili
ENSAOCG00000022039	-	98	90.687	ENSSPAG00000001710	-	100	90.239	Stegastes_partitus
ENSAOCG00000022039	-	99	85.217	ENSTRUG00000005066	-	99	85.217	Takifugu_rubripes
ENSAOCG00000022039	-	98	91.131	ENSTRUG00000005727	ef-1a	100	90.672	Takifugu_rubripes
ENSAOCG00000022039	-	98	92.239	ENSTNIG00000002619	-	100	91.757	Tetraodon_nigroviridis
ENSAOCG00000022039	-	97	83.519	ENSTNIG00000002617	-	94	83.519	Tetraodon_nigroviridis
ENSAOCG00000022039	-	98	90.466	ENSXCOG00000001542	-	100	95.349	Xiphophorus_couchianus