EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAOCG00000022056 (Gene tree)
Gene ID
111587228
Gene Symbol
cpsf3
Alias
si:dkey-81b15.1|wu:fc32f10|zgc:101655
Full Name
cleavage and polyadenylation specificity factor subunit 3-like
Gene Type
protein_coding
Species
Amphiprion_ocellaris
Status
putative
Strand
Minus strand
Length
15188 bases
Position
chrNXFZ01005699.1:84368-99555
Accession
111587228
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAOCP00000016990CPSF73-100_CPF11718.85.8e-5311
ENSAOCP00000030799CPSF73-100_CPF11718.81e-3911
ENSAOCP00000030799Beta-CaspPF10996.87.1e-3411
ENSAOCP00000016990Beta-CaspPF10996.88.3e-3411
ENSAOCP00000030799Lactamase_BPF00753.271.6e-1811
ENSAOCP00000016990Lactamase_BPF00753.271.8e-1811
ENSAOCP00000030799RMMBLPF07521.121.5e-2111
ENSAOCP00000016990RMMBLPF07521.121.7e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAOCT00000026138-5461XM_023297114ENSAOCP00000016990686 (aa)XP_023152882UPI000C3017E7
ENSAOCT00000026115-1887-ENSAOCP00000030799628 (aa)--
Gene Model
Click here to download ENSAOCG00000022056's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000022056's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAOCG00000022056cpsf310089.650ENSAOCG00000010077CPSF310087.826
ENSAOCG00000022056cpsf37139.690ENSAOCG00000021172ints117439.690
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAOCG00000022056cpsf39491.156ENSG00000119203CPSF310098.529Homo_sapiens
ENSAOCG00000022056cpsf38196.260ENSAPOG00000012241CPSF39196.260Acanthochromis_polyacanthus
ENSAOCG00000022056cpsf310098.980ENSAPOG00000022087cpsf310098.980Acanthochromis_polyacanthus
ENSAOCG00000022056cpsf39491.156ENSAMEG00000008493CPSF39985.420Ailuropoda_melanoleuca
ENSAOCG00000022056cpsf39185.851ENSACIG00000023663CPSF39979.826Amphilophus_citrinellus
ENSAOCG00000022056cpsf39190.415ENSACIG00000009846cpsf310083.843Amphilophus_citrinellus
ENSAOCG00000022056cpsf310099.854ENSAPEG00000019526cpsf310099.854Amphiprion_percula
ENSAOCG00000022056cpsf310089.650ENSAPEG00000021167CPSF310087.826Amphiprion_percula
ENSAOCG00000022056cpsf39984.302ENSATEG00000014525CPSF39984.302Anabas_testudineus
ENSAOCG00000022056cpsf39995.468ENSATEG00000003959cpsf39995.468Anabas_testudineus
ENSAOCG00000022056cpsf39290.501ENSAPLG00000006941CPSF39885.373Anas_platyrhynchos
ENSAOCG00000022056cpsf38690.037ENSACAG00000001759CPSF39982.965Anolis_carolinensis
ENSAOCG00000022056cpsf39485.374ENSANAG00000031254CPSF39980.781Aotus_nancymaae
ENSAOCG00000022056cpsf39186.169ENSACLG00000018846CPSF39986.169Astatotilapia_calliptera
ENSAOCG00000022056cpsf39795.619ENSACLG00000014484cpsf39995.619Astatotilapia_calliptera
ENSAOCG00000022056cpsf39693.000ENSAMXG00000004786cpsf39987.355Astyanax_mexicanus
ENSAOCG00000022056cpsf39491.156ENSBTAG00000019735CPSF39985.420Bos_taurus
ENSAOCG00000022056cpsf39358.902WBGene00013460cpsf-39753.680Caenorhabditis_elegans
ENSAOCG00000022056cpsf39491.156ENSCJAG00000006276CPSF39985.272Callithrix_jacchus
ENSAOCG00000022056cpsf39491.156ENSCAFG00000003375CPSF39585.420Canis_familiaris
ENSAOCG00000022056cpsf39491.156ENSCAFG00020026799CPSF39988.149Canis_lupus_dingo
ENSAOCG00000022056cpsf39491.156ENSCHIG00000013973CPSF39985.420Capra_hircus
ENSAOCG00000022056cpsf39491.156ENSTSYG00000002967CPSF39985.420Carlito_syrichta
ENSAOCG00000022056cpsf39191.115ENSCAPG00000013851CPSF39985.714Cavia_aperea
ENSAOCG00000022056cpsf39491.156ENSCPOG00000011299CPSF39985.862Cavia_porcellus
ENSAOCG00000022056cpsf39491.156ENSCCAG00000036730CPSF39985.272Cebus_capucinus
ENSAOCG00000022056cpsf39291.176ENSCATG00000014770CPSF39991.176Cercocebus_atys
ENSAOCG00000022056cpsf39491.156ENSCLAG00000002727CPSF39985.862Chinchilla_lanigera
ENSAOCG00000022056cpsf39482.143ENSCSAG00000007125CPSF39977.467Chlorocebus_sabaeus
ENSAOCG00000022056cpsf385100.000ENSCHOG00000000180CPSF38561.444Choloepus_hoffmanni
ENSAOCG00000022056cpsf39590.301ENSCPBG00000014074CPSF39985.196Chrysemys_picta_bellii
ENSAOCG00000022056cpsf39472.927ENSCING00000007214-9868.135Ciona_intestinalis
ENSAOCG00000022056cpsf39875.877ENSCANG00000034435CPSF39975.877Colobus_angolensis_palliatus
ENSAOCG00000022056cpsf39490.816ENSCGRG00001013134Cpsf39985.125Cricetulus_griseus_chok1gshd
ENSAOCG00000022056cpsf39490.816ENSCGRG00000018319Cpsf39985.125Cricetulus_griseus_crigri
ENSAOCG00000022056cpsf39692.000ENSCSEG00000002021CPSF39987.287Cynoglossus_semilaevis
ENSAOCG00000022056cpsf39791.612ENSCVAG00000015067CPSF39988.227Cyprinodon_variegatus
ENSAOCG00000022056cpsf310089.331ENSDARG00000027649cpsf310086.812Danio_rerio
ENSAOCG00000022056cpsf39489.831ENSDNOG00000008940CPSF39584.581Dasypus_novemcinctus
ENSAOCG00000022056cpsf39491.327ENSDORG00000014263Cpsf39986.728Dipodomys_ordii
ENSAOCG00000022056cpsf39670.098FBgn0261065Cpsf739966.716Drosophila_melanogaster
ENSAOCG00000022056cpsf39478.061ENSETEG00000003893CPSF39974.383Echinops_telfairi
ENSAOCG00000022056cpsf39584.448ENSEBUG00000009018cpsf39975.282Eptatretus_burgeri
ENSAOCG00000022056cpsf39491.156ENSEASG00005003970CPSF39985.420Equus_asinus_asinus
ENSAOCG00000022056cpsf39491.156ENSECAG00000019911CPSF39690.709Equus_caballus
ENSAOCG00000022056cpsf39870.987ENSEEUG00000015422CPSF39970.987Erinaceus_europaeus
ENSAOCG00000022056cpsf39694.333ENSELUG00000013775cpsf39990.421Esox_lucius
ENSAOCG00000022056cpsf39491.156ENSFCAG00000007852CPSF39985.420Felis_catus
ENSAOCG00000022056cpsf39484.699ENSFALG00000006572CPSF310084.699Ficedula_albicollis
ENSAOCG00000022056cpsf39490.816ENSFDAG00000006317CPSF39985.272Fukomys_damarensis
ENSAOCG00000022056cpsf35867.073ENSFHEG00000012186CPSF310067.073Fundulus_heteroclitus
ENSAOCG00000022056cpsf310093.440ENSFHEG00000014774cpsf310093.440Fundulus_heteroclitus
ENSAOCG00000022056cpsf39694.500ENSGMOG00000003157cpsf310089.985Gadus_morhua
ENSAOCG00000022056cpsf39590.604ENSGALG00000016424CPSF39985.341Gallus_gallus
ENSAOCG00000022056cpsf310089.968ENSGAFG00000008016CPSF310088.551Gambusia_affinis
ENSAOCG00000022056cpsf39791.200ENSGAFG00000019449cpsf310084.985Gambusia_affinis
ENSAOCG00000022056cpsf36780.514ENSGAGG00000025583CPSF39380.514Gopherus_agassizii
ENSAOCG00000022056cpsf39488.557ENSGGOG00000001757CPSF39196.774Gorilla_gorilla
ENSAOCG00000022056cpsf310095.481ENSHBUG00000001188cpsf310095.481Haplochromis_burtoni
ENSAOCG00000022056cpsf35879.753ENSHBUG00000014332CPSF310079.753Haplochromis_burtoni
ENSAOCG00000022056cpsf39490.816ENSHGLG00000000666CPSF39885.567Heterocephalus_glaber_female
ENSAOCG00000022056cpsf39490.816ENSHGLG00100007765CPSF39885.567Heterocephalus_glaber_male
ENSAOCG00000022056cpsf39791.283ENSHCOG00000015957CPSF39987.064Hippocampus_comes
ENSAOCG00000022056cpsf39992.765ENSHCOG00000007251cpsf39992.251Hippocampus_comes
ENSAOCG00000022056cpsf39692.833ENSIPUG00000023488cpsf39988.227Ictalurus_punctatus
ENSAOCG00000022056cpsf39491.156ENSSTOG00000004476CPSF39985.125Ictidomys_tridecemlineatus
ENSAOCG00000022056cpsf39490.662ENSJJAG00000023415Cpsf39984.751Jaculus_jaculus
ENSAOCG00000022056cpsf310094.606ENSKMAG00000002806cpsf310094.606Kryptolebias_marmoratus
ENSAOCG00000022056cpsf310089.172ENSKMAG00000007317CPSF39987.645Kryptolebias_marmoratus
ENSAOCG00000022056cpsf39692.833ENSLBEG00000013492CPSF39988.737Labrus_bergylta
ENSAOCG00000022056cpsf39988.855ENSLBEG00000020569cpsf39688.855Labrus_bergylta
ENSAOCG00000022056cpsf35193.168ENSLBEG00000015018-9989.247Labrus_bergylta
ENSAOCG00000022056cpsf39684.833ENSLACG00000008308CPSF39980.145Latimeria_chalumnae
ENSAOCG00000022056cpsf39692.833ENSLOCG00000016823cpsf310088.312Lepisosteus_oculatus
ENSAOCG00000022056cpsf39389.949ENSLAFG00000009467CPSF39984.389Loxodonta_africana
ENSAOCG00000022056cpsf39491.156ENSMFAG00000001339CPSF39493.750Macaca_fascicularis
ENSAOCG00000022056cpsf39491.156ENSMMUG00000018038CPSF39293.750Macaca_mulatta
ENSAOCG00000022056cpsf39096.800ENSMNEG00000039447CPSF39996.800Macaca_nemestrina
ENSAOCG00000022056cpsf39491.156ENSMLEG00000026825CPSF39296.767Mandrillus_leucophaeus
ENSAOCG00000022056cpsf310093.732ENSMAMG00000003076cpsf310093.732Mastacembelus_armatus
ENSAOCG00000022056cpsf39185.238ENSMAMG00000008835CPSF39979.275Mastacembelus_armatus
ENSAOCG00000022056cpsf310095.481ENSMZEG00005014358cpsf310095.481Maylandia_zebra
ENSAOCG00000022056cpsf310089.490ENSMZEG00005006258CPSF310087.826Maylandia_zebra
ENSAOCG00000022056cpsf39785.457ENSMGAG00000013995CPSF310085.457Meleagris_gallopavo
ENSAOCG00000022056cpsf35474.866ENSMAUG00000000166Cpsf39974.866Mesocricetus_auratus
ENSAOCG00000022056cpsf39386.078ENSMICG00000002363CPSF39980.617Microcebus_murinus
ENSAOCG00000022056cpsf39885.604ENSMOCG00000020067Cpsf39985.604Microtus_ochrogaster
ENSAOCG00000022056cpsf39386.427ENSMMOG00000018212CPSF39886.427Mola_mola
ENSAOCG00000022056cpsf38070.536ENSMMOG00000011923CPSF38477.143Mola_mola
ENSAOCG00000022056cpsf39490.986ENSMODG00000014703CPSF39983.965Monodelphis_domestica
ENSAOCG00000022056cpsf39283.622ENSMALG00000011474CPSF39983.622Monopterus_albus
ENSAOCG00000022056cpsf310095.481ENSMALG00000016416cpsf310095.481Monopterus_albus
ENSAOCG00000022056cpsf39491.156MGP_CAROLIEiJ_G0017640Cpsf39985.420Mus_caroli
ENSAOCG00000022056cpsf39491.156ENSMUSG00000054309Cpsf39697.034Mus_musculus
ENSAOCG00000022056cpsf39490.986MGP_PahariEiJ_G0029397Cpsf39985.272Mus_pahari
ENSAOCG00000022056cpsf39491.156MGP_SPRETEiJ_G0018481Cpsf39985.420Mus_spretus
ENSAOCG00000022056cpsf39491.156ENSMPUG00000013213CPSF39985.588Mustela_putorius_furo
ENSAOCG00000022056cpsf39491.171ENSMLUG00000010636CPSF39985.441Myotis_lucifugus
ENSAOCG00000022056cpsf39490.646ENSNGAG00000019836Cpsf39985.125Nannospalax_galili
ENSAOCG00000022056cpsf310095.335ENSNBRG00000004770cpsf310095.335Neolamprologus_brichardi
ENSAOCG00000022056cpsf39186.169ENSNBRG00000010525CPSF39986.169Neolamprologus_brichardi
ENSAOCG00000022056cpsf39491.156ENSNLEG00000013359CPSF39196.774Nomascus_leucogenys
ENSAOCG00000022056cpsf39459.423ENSMEUG00000013117-9955.523Notamacropus_eugenii
ENSAOCG00000022056cpsf39976.799ENSOPRG00000008902CPSF39976.799Ochotona_princeps
ENSAOCG00000022056cpsf39491.327ENSODEG00000003129CPSF39986.009Octodon_degus
ENSAOCG00000022056cpsf310095.190ENSONIG00000018812cpsf310095.190Oreochromis_niloticus
ENSAOCG00000022056cpsf37588.747ENSOANG00000008577CPSF39982.562Ornithorhynchus_anatinus
ENSAOCG00000022056cpsf39491.156ENSOCUG00000003728CPSF39985.420Oryctolagus_cuniculus
ENSAOCG00000022056cpsf310093.003ENSORLG00000018854cpsf310093.003Oryzias_latipes
ENSAOCG00000022056cpsf310093.149ENSORLG00020013331cpsf310093.149Oryzias_latipes_hni
ENSAOCG00000022056cpsf310093.003ENSORLG00015011017cpsf310093.003Oryzias_latipes_hsok
ENSAOCG00000022056cpsf310093.294ENSOMEG00000010647cpsf39693.294Oryzias_melastigma
ENSAOCG00000022056cpsf39479.932ENSOGAG00000001680CPSF39975.552Otolemur_garnettii
ENSAOCG00000022056cpsf39491.156ENSOARG00000015073CPSF39985.420Ovis_aries
ENSAOCG00000022056cpsf39491.156ENSPPAG00000042457CPSF39196.774Pan_paniscus
ENSAOCG00000022056cpsf39491.156ENSPPRG00000016790CPSF39985.567Panthera_pardus
ENSAOCG00000022056cpsf39391.312ENSPTIG00000003920CPSF39985.693Panthera_tigris_altaica
ENSAOCG00000022056cpsf39491.156ENSPTRG00000011638CPSF39196.774Pan_troglodytes
ENSAOCG00000022056cpsf39491.156ENSPANG00000016798CPSF39493.750Papio_anubis
ENSAOCG00000022056cpsf310089.809ENSPKIG00000023646cpsf310088.696Paramormyrops_kingsleyae
ENSAOCG00000022056cpsf39489.813ENSPSIG00000016144CPSF39984.164Pelodiscus_sinensis
ENSAOCG00000022056cpsf35880.741ENSPMGG00000015311CPSF310080.741Periophthalmus_magnuspinnatus
ENSAOCG00000022056cpsf39092.670ENSPMGG00000006141-10085.331Periophthalmus_magnuspinnatus
ENSAOCG00000022056cpsf39490.986ENSPEMG00000017668Cpsf39985.272Peromyscus_maniculatus_bairdii
ENSAOCG00000022056cpsf38689.134ENSPMAG00000004841cpsf39989.134Petromyzon_marinus
ENSAOCG00000022056cpsf39190.941ENSPCIG00000009823CPSF39885.736Phascolarctos_cinereus
ENSAOCG00000022056cpsf310089.490ENSPFOG00000010418-10088.261Poecilia_formosa
ENSAOCG00000022056cpsf310093.732ENSPFOG00000015922cpsf310093.732Poecilia_formosa
ENSAOCG00000022056cpsf310093.732ENSPLAG00000000882cpsf310093.732Poecilia_latipinna
ENSAOCG00000022056cpsf35881.728ENSPLAG00000021300-10081.728Poecilia_latipinna
ENSAOCG00000022056cpsf310093.732ENSPMEG00000018309cpsf310093.732Poecilia_mexicana
ENSAOCG00000022056cpsf310083.841ENSPREG00000004482CPSF310083.841Poecilia_reticulata
ENSAOCG00000022056cpsf39791.200ENSPREG00000014875cpsf310084.985Poecilia_reticulata
ENSAOCG00000022056cpsf39486.395ENSPPYG00000012666CPSF39981.149Pongo_abelii
ENSAOCG00000022056cpsf38565.160ENSPCAG00000015042CPSF38965.160Procavia_capensis
ENSAOCG00000022056cpsf38886.159ENSPCOG00000023016CPSF39986.159Propithecus_coquereli
ENSAOCG00000022056cpsf39491.156ENSPVAG00000005324CPSF39985.441Pteropus_vampyrus
ENSAOCG00000022056cpsf38690.926ENSPNYG00000021047CPSF39091.144Pundamilia_nyererei
ENSAOCG00000022056cpsf310095.481ENSPNYG00000004405cpsf310095.481Pundamilia_nyererei
ENSAOCG00000022056cpsf39693.167ENSPNAG00000023060cpsf39987.936Pygocentrus_nattereri
ENSAOCG00000022056cpsf39491.156ENSRNOG00000052418Cpsf39985.420Rattus_norvegicus
ENSAOCG00000022056cpsf39485.374ENSRBIG00000041615CPSF39981.240Rhinopithecus_bieti
ENSAOCG00000022056cpsf39491.156ENSRROG00000033792CPSF39985.420Rhinopithecus_roxellana
ENSAOCG00000022056cpsf39539.894YLR277CYSH19739.894Saccharomyces_cerevisiae
ENSAOCG00000022056cpsf39187.108ENSSBOG00000027263CPSF39781.654Saimiri_boliviensis_boliviensis
ENSAOCG00000022056cpsf39490.986ENSSHAG00000007024CPSF39985.272Sarcophilus_harrisii
ENSAOCG00000022056cpsf310089.650ENSSFOG00015002108cpsf310088.406Scleropages_formosus
ENSAOCG00000022056cpsf39790.600ENSSMAG00000020534CPSF39787.976Scophthalmus_maximus
ENSAOCG00000022056cpsf39791.612ENSSDUG00000018498CPSF310087.826Seriola_dumerili
ENSAOCG00000022056cpsf310095.190ENSSDUG00000002828cpsf39795.190Seriola_dumerili
ENSAOCG00000022056cpsf39791.612ENSSLDG00000005234CPSF310087.826Seriola_lalandi_dorsalis
ENSAOCG00000022056cpsf310096.019ENSSLDG00000008469cpsf39796.019Seriola_lalandi_dorsalis
ENSAOCG00000022056cpsf38883.051ENSSARG00000005186CPSF38983.051Sorex_araneus
ENSAOCG00000022056cpsf39189.792ENSSPUG00000015525CPSF39784.305Sphenodon_punctatus
ENSAOCG00000022056cpsf310089.650ENSSPAG00000002906CPSF310087.971Stegastes_partitus
ENSAOCG00000022056cpsf310098.251ENSSPAG00000018579cpsf310098.251Stegastes_partitus
ENSAOCG00000022056cpsf39491.156ENSSSCG00000020799CPSF39985.420Sus_scrofa
ENSAOCG00000022056cpsf39985.169ENSTGUG00000013016CPSF39985.169Taeniopygia_guttata
ENSAOCG00000022056cpsf35873.086ENSTRUG00000013905CPSF39973.086Takifugu_rubripes
ENSAOCG00000022056cpsf39992.409ENSTRUG00000007030cpsf39892.409Takifugu_rubripes
ENSAOCG00000022056cpsf38490.634ENSTBEG00000002707CPSF38490.634Tupaia_belangeri
ENSAOCG00000022056cpsf38673.479ENSTTRG00000000861CPSF38773.479Tursiops_truncatus
ENSAOCG00000022056cpsf39491.156ENSUAMG00000007535CPSF39585.714Ursus_americanus
ENSAOCG00000022056cpsf38890.794ENSUMAG00000003676CPSF39490.323Ursus_maritimus
ENSAOCG00000022056cpsf39191.115ENSVPAG00000008041CPSF310085.489Vicugna_pacos
ENSAOCG00000022056cpsf39491.156ENSVVUG00000002194CPSF39985.420Vulpes_vulpes
ENSAOCG00000022056cpsf39690.167ENSXETG00000008263cpsf39984.783Xenopus_tropicalis
ENSAOCG00000022056cpsf310093.149ENSXCOG00000019695cpsf310093.149Xiphophorus_couchianus
ENSAOCG00000022056cpsf35479.839ENSXCOG00000000957-8779.839Xiphophorus_couchianus
ENSAOCG00000022056cpsf310090.127ENSXMAG00000027291CPSF310088.406Xiphophorus_maculatus
ENSAOCG00000022056cpsf310093.586ENSXMAG00000009784cpsf310093.586Xiphophorus_maculatus

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