EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000022245 (Gene tree)
Gene ID: 111565567
Gene Symbol: rbm47
Alias: si:ch211-241e15.2|wu:fj94a03
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 38245 bases
Position: chrNXFZ01001927.1:674133-712377
Accession: 111565567
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000030915	RRM_1	PF00076.22	2.5e-39	1	3
ENSAOCP00000030915	RRM_1	PF00076.22	2.5e-39	2	3
ENSAOCP00000030915	RRM_1	PF00076.22	2.5e-39	3	3
ENSAOCP00000017171	RRM_1	PF00076.22	2.7e-39	1	3
ENSAOCP00000017171	RRM_1	PF00076.22	2.7e-39	2	3
ENSAOCP00000017171	RRM_1	PF00076.22	2.7e-39	3	3
ENSAOCP00000017138	RRM_1	PF00076.22	3.6e-39	1	3
ENSAOCP00000017138	RRM_1	PF00076.22	3.6e-39	2	3
ENSAOCP00000017138	RRM_1	PF00076.22	3.6e-39	3	3
ENSAOCP00000030927	RRM_1	PF00076.22	4.1e-39	1	3
ENSAOCP00000030927	RRM_1	PF00076.22	4.1e-39	2	3
ENSAOCP00000030927	RRM_1	PF00076.22	4.1e-39	3	3
ENSAOCP00000030911	RRM_1	PF00076.22	4.5e-39	1	3
ENSAOCP00000030911	RRM_1	PF00076.22	4.5e-39	2	3
ENSAOCP00000030911	RRM_1	PF00076.22	4.5e-39	3	3
ENSAOCP00000030929	RRM_1	PF00076.22	4.5e-39	1	3
ENSAOCP00000030929	RRM_1	PF00076.22	4.5e-39	2	3
ENSAOCP00000030929	RRM_1	PF00076.22	4.5e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000026311	-	1770	-	ENSAOCP00000017138	589 (aa)	-	-
ENSAOCT00000026443	-	5244	XM_023265708	ENSAOCP00000030927	608 (aa)	XP_023121476	UPI000C30B6C2
ENSAOCT00000026338	-	5024	XM_023265706	ENSAOCP00000030911	616 (aa)	XP_023121474	UPI000C305758
ENSAOCT00000026349	-	5034	XM_023265711	ENSAOCP00000030915	538 (aa)	XP_023121479	UPI000C3016CA
ENSAOCT00000026405	-	5268	XM_023265702	ENSAOCP00000030929	616 (aa)	XP_023121470	UPI000C305758
ENSAOCT00000026362	-	5058	XM_023265710	ENSAOCP00000017171	546 (aa)	XP_023121478	UPI000C3150EA

Gene Model

Click here to download ENSAOCG00000022245's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000022245's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000022245	rbm47	56	54.248	ENSAOCG00000023948	hnrnpr	68	45.561
ENSAOCG00000022245	rbm47	55	52.980	ENSAOCG00000014435	syncrip	67	44.498
ENSAOCG00000022245	rbm47	57	64.610	ENSAOCG00000001892	-	61	64.610
ENSAOCG00000022245	rbm47	55	53.974	ENSAOCG00000018281	syncripl	73	46.535
ENSAOCG00000022245	rbm47	80	51.460	ENSAOCG00000023744	a1cf	87	70.701

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000022245	rbm47	100	81.383	ENSG00000163694	RBM47	100	84.793	Homo_sapiens
ENSAOCG00000022245	rbm47	100	99.748	ENSAPOG00000011062	rbm47	100	99.743	Acanthochromis_polyacanthus
ENSAOCG00000022245	rbm47	93	84.225	ENSAMEG00000009672	RBM47	100	76.910	Ailuropoda_melanoleuca
ENSAOCG00000022245	rbm47	100	96.610	ENSACIG00000011531	rbm47	100	96.610	Amphilophus_citrinellus
ENSAOCG00000022245	rbm47	100	100.000	ENSAPEG00000018304	rbm47	100	100.000	Amphiprion_percula
ENSAOCG00000022245	rbm47	100	97.172	ENSATEG00000018400	rbm47	100	97.172	Anabas_testudineus
ENSAOCG00000022245	rbm47	100	78.297	ENSAPLG00000013974	RBM47	100	77.629	Anas_platyrhynchos
ENSAOCG00000022245	rbm47	100	78.517	ENSACAG00000011833	RBM47	100	77.038	Anolis_carolinensis
ENSAOCG00000022245	rbm47	100	82.933	ENSANAG00000029440	RBM47	100	81.330	Aotus_nancymaae
ENSAOCG00000022245	rbm47	100	94.087	ENSACLG00000016902	rbm47	100	94.087	Astatotilapia_calliptera
ENSAOCG00000022245	rbm47	100	83.089	ENSAMXG00000021794	rbm47	100	86.041	Astyanax_mexicanus
ENSAOCG00000022245	rbm47	100	79.847	ENSBTAG00000002356	RBM47	100	78.319	Bos_taurus
ENSAOCG00000022245	rbm47	98	84.444	ENSCJAG00000019385	RBM47	100	81.330	Callithrix_jacchus
ENSAOCG00000022245	rbm47	93	84.986	ENSCAFG00000015898	RBM47	100	78.559	Canis_familiaris
ENSAOCG00000022245	rbm47	83	80.855	ENSCAFG00020010558	RBM47	94	82.493	Canis_lupus_dingo
ENSAOCG00000022245	rbm47	100	79.847	ENSCHIG00000026214	RBM47	100	78.319	Capra_hircus
ENSAOCG00000022245	rbm47	84	86.547	ENSTSYG00000033612	RBM47	93	85.398	Carlito_syrichta
ENSAOCG00000022245	rbm47	100	73.109	ENSCAPG00000008426	RBM47	100	72.605	Cavia_aperea
ENSAOCG00000022245	rbm47	100	82.667	ENSCPOG00000014100	RBM47	100	78.020	Cavia_porcellus
ENSAOCG00000022245	rbm47	100	83.733	ENSCCAG00000030129	-	100	81.378	Cebus_capucinus
ENSAOCG00000022245	rbm47	99	55.966	ENSCCAG00000024397	-	99	55.294	Cebus_capucinus
ENSAOCG00000022245	rbm47	100	81.383	ENSCATG00000042064	RBM47	100	84.309	Cercocebus_atys
ENSAOCG00000022245	rbm47	100	81.698	ENSCLAG00000001684	RBM47	100	82.911	Chinchilla_lanigera
ENSAOCG00000022245	rbm47	93	84.746	ENSCSAG00000017060	RBM47	100	77.963	Chlorocebus_sabaeus
ENSAOCG00000022245	rbm47	88	74.550	ENSCHOG00000011731	RBM47	88	76.906	Choloepus_hoffmanni
ENSAOCG00000022245	rbm47	100	82.908	ENSCPBG00000013831	RBM47	100	79.833	Chrysemys_picta_bellii
ENSAOCG00000022245	rbm47	100	82.540	ENSCANG00000019997	RBM47	100	84.309	Colobus_angolensis_palliatus
ENSAOCG00000022245	rbm47	100	77.188	ENSCGRG00001020102	-	100	78.780	Cricetulus_griseus_chok1gshd
ENSAOCG00000022245	rbm47	100	82.447	ENSCGRG00001000623	-	100	80.867	Cricetulus_griseus_chok1gshd
ENSAOCG00000022245	rbm47	100	78.195	ENSCGRG00000007762	-	100	80.380	Cricetulus_griseus_crigri
ENSAOCG00000022245	rbm47	100	76.923	ENSCGRG00000014760	-	100	78.515	Cricetulus_griseus_crigri
ENSAOCG00000022245	rbm47	100	91.385	ENSCSEG00000004545	rbm47	100	91.554	Cynoglossus_semilaevis
ENSAOCG00000022245	rbm47	100	95.373	ENSCVAG00000020144	rbm47	100	95.373	Cyprinodon_variegatus
ENSAOCG00000022245	rbm47	100	86.957	ENSDARG00000061985	rbm47	100	87.212	Danio_rerio
ENSAOCG00000022245	rbm47	93	85.674	ENSDNOG00000046854	RBM47	100	78.992	Dasypus_novemcinctus
ENSAOCG00000022245	rbm47	100	79.494	ENSDORG00000010144	Rbm47	100	77.371	Dipodomys_ordii
ENSAOCG00000022245	rbm47	93	82.682	ENSETEG00000009194	RBM47	100	77.870	Echinops_telfairi
ENSAOCG00000022245	rbm47	99	58.541	ENSEBUG00000011912	rbm47	95	74.640	Eptatretus_burgeri
ENSAOCG00000022245	rbm47	93	85.393	ENSEASG00005008443	RBM47	100	78.319	Equus_asinus_asinus
ENSAOCG00000022245	rbm47	93	85.393	ENSECAG00000004400	RBM47	100	78.319	Equus_caballus
ENSAOCG00000022245	rbm47	75	82.684	ENSEEUG00000001194	RBM47	75	84.848	Erinaceus_europaeus
ENSAOCG00000022245	rbm47	100	89.873	ENSELUG00000006148	rbm47	100	89.873	Esox_lucius
ENSAOCG00000022245	rbm47	100	77.441	ENSFCAG00000012399	RBM47	100	78.788	Felis_catus
ENSAOCG00000022245	rbm47	100	82.143	ENSFALG00000002861	RBM47	100	79.466	Ficedula_albicollis
ENSAOCG00000022245	rbm47	100	81.432	ENSFDAG00000016326	RBM47	100	76.717	Fukomys_damarensis
ENSAOCG00000022245	rbm47	100	93.573	ENSFHEG00000007938	rbm47	100	90.678	Fundulus_heteroclitus
ENSAOCG00000022245	rbm47	100	88.579	ENSGMOG00000014802	rbm47	100	88.579	Gadus_morhua
ENSAOCG00000022245	rbm47	72	82.398	ENSGALG00000014267	RBM47	99	85.450	Gallus_gallus
ENSAOCG00000022245	rbm47	72	89.460	ENSGAFG00000020571	rbm47	98	93.531	Gambusia_affinis
ENSAOCG00000022245	rbm47	100	94.087	ENSGACG00000016223	rbm47	100	94.087	Gasterosteus_aculeatus
ENSAOCG00000022245	rbm47	100	82.908	ENSGAGG00000020051	RBM47	100	79.833	Gopherus_agassizii
ENSAOCG00000022245	rbm47	100	81.383	ENSGGOG00000001367	RBM47	100	84.309	Gorilla_gorilla
ENSAOCG00000022245	rbm47	100	94.087	ENSHBUG00000003520	rbm47	100	94.087	Haplochromis_burtoni
ENSAOCG00000022245	rbm47	100	61.481	ENSHGLG00000016914	RBM47	100	80.000	Heterocephalus_glaber_female
ENSAOCG00000022245	rbm47	100	82.493	ENSHGLG00100014028	-	100	80.203	Heterocephalus_glaber_male
ENSAOCG00000022245	rbm47	100	70.134	ENSHGLG00100003071	-	100	69.799	Heterocephalus_glaber_male
ENSAOCG00000022245	rbm47	99	95.887	ENSHCOG00000002074	rbm47	99	95.887	Hippocampus_comes
ENSAOCG00000022245	rbm47	100	87.724	ENSIPUG00000004743	rbm47	100	87.724	Ictalurus_punctatus
ENSAOCG00000022245	rbm47	100	81.167	ENSSTOG00000004727	RBM47	100	81.330	Ictidomys_tridecemlineatus
ENSAOCG00000022245	rbm47	93	85.634	ENSJJAG00000013823	Rbm47	100	76.333	Jaculus_jaculus
ENSAOCG00000022245	rbm47	100	95.128	ENSKMAG00000000084	rbm47	100	95.128	Kryptolebias_marmoratus
ENSAOCG00000022245	rbm47	100	95.116	ENSLBEG00000008436	rbm47	100	94.962	Labrus_bergylta
ENSAOCG00000022245	rbm47	93	87.955	ENSLACG00000007196	RBM47	100	80.034	Latimeria_chalumnae
ENSAOCG00000022245	rbm47	93	90.652	ENSLOCG00000012966	rbm47	95	83.193	Lepisosteus_oculatus
ENSAOCG00000022245	rbm47	100	78.772	ENSLAFG00000011998	RBM47	100	77.926	Loxodonta_africana
ENSAOCG00000022245	rbm47	100	81.383	ENSMFAG00000037967	RBM47	100	84.309	Macaca_fascicularis
ENSAOCG00000022245	rbm47	93	84.746	ENSMMUG00000012036	RBM47	100	82.902	Macaca_mulatta
ENSAOCG00000022245	rbm47	100	81.117	ENSMNEG00000040774	RBM47	100	84.309	Macaca_nemestrina
ENSAOCG00000022245	rbm47	100	83.175	ENSMLEG00000041432	RBM47	100	85.079	Mandrillus_leucophaeus
ENSAOCG00000022245	rbm47	100	96.658	ENSMAMG00000019143	rbm47	100	96.658	Mastacembelus_armatus
ENSAOCG00000022245	rbm47	100	94.087	ENSMZEG00005023659	rbm47	100	94.087	Maylandia_zebra
ENSAOCG00000022245	rbm47	100	82.398	ENSMGAG00000012226	RBM47	100	79.070	Meleagris_gallopavo
ENSAOCG00000022245	rbm47	100	81.794	ENSMAUG00000006493	Rbm47	100	82.850	Mesocricetus_auratus
ENSAOCG00000022245	rbm47	100	78.933	ENSMICG00000026417	RBM47	100	81.818	Microcebus_murinus
ENSAOCG00000022245	rbm47	100	81.746	ENSMOCG00000021170	Rbm47	100	82.540	Microtus_ochrogaster
ENSAOCG00000022245	rbm47	100	94.859	ENSMMOG00000007260	rbm47	100	94.859	Mola_mola
ENSAOCG00000022245	rbm47	100	75.426	ENSMODG00000020561	-	100	73.322	Monodelphis_domestica
ENSAOCG00000022245	rbm47	100	81.841	ENSMODG00000007003	RBM47	100	78.763	Monodelphis_domestica
ENSAOCG00000022245	rbm47	57	78.135	ENSMODG00000015426	-	97	78.135	Monodelphis_domestica
ENSAOCG00000022245	rbm47	100	95.373	ENSMALG00000005167	rbm47	100	95.373	Monopterus_albus
ENSAOCG00000022245	rbm47	100	82.713	MGP_CAROLIEiJ_G0027258	Rbm47	100	83.777	Mus_caroli
ENSAOCG00000022245	rbm47	100	82.713	ENSMUSG00000070780	Rbm47	100	83.777	Mus_musculus
ENSAOCG00000022245	rbm47	100	82.447	MGP_PahariEiJ_G0017040	Rbm47	100	83.511	Mus_pahari
ENSAOCG00000022245	rbm47	100	82.713	MGP_SPRETEiJ_G0028253	Rbm47	100	83.777	Mus_spretus
ENSAOCG00000022245	rbm47	93	85.070	ENSMPUG00000006177	RBM47	94	77.219	Mustela_putorius_furo
ENSAOCG00000022245	rbm47	100	80.916	ENSMLUG00000000889	RBM47	100	79.264	Myotis_lucifugus
ENSAOCG00000022245	rbm47	100	80.102	ENSNGAG00000003325	Rbm47	100	76.461	Nannospalax_galili
ENSAOCG00000022245	rbm47	100	94.602	ENSNBRG00000015092	rbm47	100	93.801	Neolamprologus_brichardi
ENSAOCG00000022245	rbm47	100	81.383	ENSNLEG00000017151	RBM47	100	84.309	Nomascus_leucogenys
ENSAOCG00000022245	rbm47	65	87.288	ENSMEUG00000009516	-	99	80.425	Notamacropus_eugenii
ENSAOCG00000022245	rbm47	86	85.892	ENSOPRG00000016507	-	75	85.892	Ochotona_princeps
ENSAOCG00000022245	rbm47	93	84.225	ENSODEG00000004873	RBM47	100	77.983	Octodon_degus
ENSAOCG00000022245	rbm47	100	95.630	ENSONIG00000009061	rbm47	100	94.581	Oreochromis_niloticus
ENSAOCG00000022245	rbm47	100	81.074	ENSOANG00000008978	RBM47	100	78.965	Ornithorhynchus_anatinus
ENSAOCG00000022245	rbm47	100	79.284	ENSOCUG00000012034	RBM47	100	78.057	Oryctolagus_cuniculus
ENSAOCG00000022245	rbm47	100	94.615	ENSORLG00000005847	rbm47	100	94.615	Oryzias_latipes
ENSAOCG00000022245	rbm47	100	94.615	ENSORLG00020005154	rbm47	100	94.615	Oryzias_latipes_hni
ENSAOCG00000022245	rbm47	100	94.359	ENSORLG00015000066	rbm47	100	94.359	Oryzias_latipes_hsok
ENSAOCG00000022245	rbm47	100	94.207	ENSOMEG00000010730	rbm47	100	94.087	Oryzias_melastigma
ENSAOCG00000022245	rbm47	93	78.873	ENSOGAG00000025193	-	100	72.054	Otolemur_garnettii
ENSAOCG00000022245	rbm47	93	84.789	ENSOGAG00000029367	-	100	77.387	Otolemur_garnettii
ENSAOCG00000022245	rbm47	100	69.748	ENSOARG00000012711	RBM47	100	70.924	Ovis_aries
ENSAOCG00000022245	rbm47	93	84.746	ENSPPAG00000029763	RBM47	95	84.309	Pan_paniscus
ENSAOCG00000022245	rbm47	100	81.266	ENSPPRG00000012873	RBM47	99	83.467	Panthera_pardus
ENSAOCG00000022245	rbm47	86	77.228	ENSPTIG00000017046	RBM47	100	77.228	Panthera_tigris_altaica
ENSAOCG00000022245	rbm47	100	81.383	ENSPTRG00000016006	RBM47	100	84.309	Pan_troglodytes
ENSAOCG00000022245	rbm47	100	81.383	ENSPANG00000005980	RBM47	100	84.309	Papio_anubis
ENSAOCG00000022245	rbm47	100	83.805	ENSPKIG00000013431	RBM47	98	83.805	Paramormyrops_kingsleyae
ENSAOCG00000022245	rbm47	95	87.535	ENSPKIG00000005037	rbm47	100	83.846	Paramormyrops_kingsleyae
ENSAOCG00000022245	rbm47	88	82.653	ENSPSIG00000017516	RBM47	97	81.544	Pelodiscus_sinensis
ENSAOCG00000022245	rbm47	100	91.864	ENSPMGG00000018540	rbm47	100	92.034	Periophthalmus_magnuspinnatus
ENSAOCG00000022245	rbm47	100	81.481	ENSPEMG00000011088	Rbm47	100	82.540	Peromyscus_maniculatus_bairdii
ENSAOCG00000022245	rbm47	100	93.573	ENSPFOG00000007997	rbm47	100	93.573	Poecilia_formosa
ENSAOCG00000022245	rbm47	100	93.316	ENSPLAG00000002072	rbm47	100	92.973	Poecilia_latipinna
ENSAOCG00000022245	rbm47	100	93.316	ENSPMEG00000017492	rbm47	100	93.316	Poecilia_mexicana
ENSAOCG00000022245	rbm47	100	93.573	ENSPREG00000008456	rbm47	100	93.573	Poecilia_reticulata
ENSAOCG00000022245	rbm47	99	68.074	ENSPPYG00000014688	RBM47	100	68.350	Pongo_abelii
ENSAOCG00000022245	rbm47	89	78.141	ENSPCAG00000011879	RBM47	81	83.960	Procavia_capensis
ENSAOCG00000022245	rbm47	100	81.117	ENSPCOG00000023451	RBM47	100	83.245	Propithecus_coquereli
ENSAOCG00000022245	rbm47	93	83.473	ENSPVAG00000003812	RBM47	100	77.258	Pteropus_vampyrus
ENSAOCG00000022245	rbm47	100	94.087	ENSPNYG00000022868	rbm47	100	93.496	Pundamilia_nyererei
ENSAOCG00000022245	rbm47	100	86.957	ENSPNAG00000007940	rbm47	100	87.500	Pygocentrus_nattereri
ENSAOCG00000022245	rbm47	100	79.695	ENSRNOG00000002408	Rbm47	100	77.500	Rattus_norvegicus
ENSAOCG00000022245	rbm47	100	82.540	ENSRBIG00000039601	RBM47	100	84.309	Rhinopithecus_bieti
ENSAOCG00000022245	rbm47	100	82.540	ENSRROG00000044696	RBM47	100	84.309	Rhinopithecus_roxellana
ENSAOCG00000022245	rbm47	100	74.916	ENSSBOG00000028475	RBM47	100	81.031	Saimiri_boliviensis_boliviensis
ENSAOCG00000022245	rbm47	100	82.097	ENSSHAG00000017576	RBM47	100	82.097	Sarcophilus_harrisii
ENSAOCG00000022245	rbm47	100	83.887	ENSSFOG00015012445	rbm47	100	84.655	Scleropages_formosus
ENSAOCG00000022245	rbm47	99	80.272	ENSSFOG00015024101	RBM47	99	83.880	Scleropages_formosus
ENSAOCG00000022245	rbm47	100	95.630	ENSSMAG00000009744	rbm47	100	95.630	Scophthalmus_maximus
ENSAOCG00000022245	rbm47	100	95.922	ENSSDUG00000022684	rbm47	100	95.922	Seriola_dumerili
ENSAOCG00000022245	rbm47	100	97.119	ENSSLDG00000003109	rbm47	100	97.119	Seriola_lalandi_dorsalis
ENSAOCG00000022245	rbm47	85	79.955	ENSSARG00000001735	RBM47	75	82.183	Sorex_araneus
ENSAOCG00000022245	rbm47	100	83.947	ENSSPUG00000007515	RBM47	100	84.392	Sphenodon_punctatus
ENSAOCG00000022245	rbm47	100	98.489	ENSSPAG00000001257	rbm47	100	98.489	Stegastes_partitus
ENSAOCG00000022245	rbm47	100	81.746	ENSSSCG00000008796	RBM47	100	77.983	Sus_scrofa
ENSAOCG00000022245	rbm47	100	81.888	ENSTGUG00000008705	RBM47	100	79.264	Taeniopygia_guttata
ENSAOCG00000022245	rbm47	100	91.186	ENSTRUG00000014050	rbm47	100	91.017	Takifugu_rubripes
ENSAOCG00000022245	rbm47	100	93.059	ENSTNIG00000006127	rbm47	100	91.626	Tetraodon_nigroviridis
ENSAOCG00000022245	rbm47	81	83.051	ENSTBEG00000001607	RBM47	76	82.133	Tupaia_belangeri
ENSAOCG00000022245	rbm47	93	85.393	ENSTTRG00000002839	RBM47	100	78.151	Tursiops_truncatus
ENSAOCG00000022245	rbm47	93	84.225	ENSUAMG00000021346	RBM47	100	77.219	Ursus_americanus
ENSAOCG00000022245	rbm47	52	82.540	ENSVPAG00000000641	-	56	79.310	Vicugna_pacos
ENSAOCG00000022245	rbm47	93	85.269	ENSVVUG00000014774	RBM47	100	78.523	Vulpes_vulpes
ENSAOCG00000022245	rbm47	100	81.726	ENSXETG00000012802	rbm47	100	78.130	Xenopus_tropicalis
ENSAOCG00000022245	rbm47	100	93.784	ENSXCOG00000000780	rbm47	100	93.784	Xiphophorus_couchianus
ENSAOCG00000022245	rbm47	100	94.087	ENSXMAG00000009874	rbm47	100	94.087	Xiphophorus_maculatus