EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000022276 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 8479 bases
Position: chrNXFZ01003331.1:29498-37976
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000030944	zf-C2H2	PF00096.26	4.8e-50	1	8
ENSAOCP00000030944	zf-C2H2	PF00096.26	4.8e-50	2	8
ENSAOCP00000030944	zf-C2H2	PF00096.26	4.8e-50	3	8
ENSAOCP00000030944	zf-C2H2	PF00096.26	4.8e-50	4	8
ENSAOCP00000030944	zf-C2H2	PF00096.26	4.8e-50	5	8
ENSAOCP00000030944	zf-C2H2	PF00096.26	4.8e-50	6	8
ENSAOCP00000030944	zf-C2H2	PF00096.26	4.8e-50	7	8
ENSAOCP00000030944	zf-C2H2	PF00096.26	4.8e-50	8	8
ENSAOCP00000030944	zf-met	PF12874.7	4.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000032599	-	978	-	ENSAOCP00000030944	325 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000022276's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000022276's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000022276	-	98	55.944	ENSAOCG00000024281	-	88	55.944
ENSAOCG00000022276	-	94	47.872	ENSAOCG00000009970	-	64	45.928
ENSAOCG00000022276	-	92	48.077	ENSAOCG00000010460	zgc:171929	57	48.077
ENSAOCG00000022276	-	95	44.805	ENSAOCG00000002795	-	64	44.805
ENSAOCG00000022276	-	94	37.264	ENSAOCG00000013589	-	93	37.264
ENSAOCG00000022276	-	92	36.842	ENSAOCG00000021557	scrt2	50	36.842
ENSAOCG00000022276	-	99	41.637	ENSAOCG00000016905	-	79	41.637
ENSAOCG00000022276	-	98	59.206	ENSAOCG00000018543	-	86	59.206
ENSAOCG00000022276	-	95	38.384	ENSAOCG00000010954	-	59	38.591
ENSAOCG00000022276	-	95	35.714	ENSAOCG00000013505	-	50	35.385
ENSAOCG00000022276	-	92	49.367	ENSAOCG00000024256	-	89	49.367
ENSAOCG00000022276	-	99	56.678	ENSAOCG00000022675	-	94	56.678
ENSAOCG00000022276	-	96	47.590	ENSAOCG00000013124	-	66	47.590
ENSAOCG00000022276	-	98	56.107	ENSAOCG00000002585	-	68	48.943
ENSAOCG00000022276	-	97	53.903	ENSAOCG00000014651	-	55	53.171
ENSAOCG00000022276	-	97	49.673	ENSAOCG00000017602	-	67	49.673
ENSAOCG00000022276	-	99	49.845	ENSAOCG00000014165	-	88	50.382
ENSAOCG00000022276	-	94	68.966	ENSAOCG00000013672	-	92	68.966
ENSAOCG00000022276	-	96	38.611	ENSAOCG00000016897	-	65	38.611
ENSAOCG00000022276	-	94	49.231	ENSAOCG00000022004	znf236	77	49.231
ENSAOCG00000022276	-	98	45.411	ENSAOCG00000013578	-	79	49.754
ENSAOCG00000022276	-	93	42.969	ENSAOCG00000007388	-	59	42.969
ENSAOCG00000022276	-	91	53.030	ENSAOCG00000007347	-	79	53.030
ENSAOCG00000022276	-	98	59.804	ENSAOCG00000018484	-	94	59.804
ENSAOCG00000022276	-	96	40.461	ENSAOCG00000001615	-	87	40.461
ENSAOCG00000022276	-	97	49.838	ENSAOCG00000013978	-	93	49.838
ENSAOCG00000022276	-	98	50.000	ENSAOCG00000012903	-	78	50.000
ENSAOCG00000022276	-	96	38.436	ENSAOCG00000013656	-	70	38.436
ENSAOCG00000022276	-	98	73.705	ENSAOCG00000022459	-	92	64.557
ENSAOCG00000022276	-	94	39.716	ENSAOCG00000014818	znf319b	81	55.128
ENSAOCG00000022276	-	98	62.745	ENSAOCG00000018307	-	93	60.968
ENSAOCG00000022276	-	94	50.000	ENSAOCG00000016409	-	60	50.000
ENSAOCG00000022276	-	95	49.091	ENSAOCG00000022926	-	61	37.255
ENSAOCG00000022276	-	97	51.634	ENSAOCG00000022375	-	81	49.673
ENSAOCG00000022276	-	92	46.154	ENSAOCG00000009098	-	50	31.548
ENSAOCG00000022276	-	93	47.794	ENSAOCG00000010471	-	68	47.794
ENSAOCG00000022276	-	98	36.538	ENSAOCG00000018684	si:dkey-89b17.4	86	36.538
ENSAOCG00000022276	-	96	62.069	ENSAOCG00000006793	-	83	52.743
ENSAOCG00000022276	-	94	64.815	ENSAOCG00000003277	-	77	64.815
ENSAOCG00000022276	-	91	41.414	ENSAOCG00000018579	-	75	41.414
ENSAOCG00000022276	-	99	61.925	ENSAOCG00000015369	-	99	58.400
ENSAOCG00000022276	-	99	61.566	ENSAOCG00000015586	-	87	61.111
ENSAOCG00000022276	-	96	43.322	ENSAOCG00000022283	-	94	43.322
ENSAOCG00000022276	-	98	38.628	ENSAOCG00000015987	-	70	38.710
ENSAOCG00000022276	-	99	58.170	ENSAOCG00000013130	-	79	59.804
ENSAOCG00000022276	-	98	39.275	ENSAOCG00000004564	-	89	39.275
ENSAOCG00000022276	-	94	34.483	ENSAOCG00000010173	znf407	61	32.422
ENSAOCG00000022276	-	97	54.667	ENSAOCG00000016287	-	72	54.667
ENSAOCG00000022276	-	97	41.593	ENSAOCG00000012823	-	63	41.593
ENSAOCG00000022276	-	96	44.211	ENSAOCG00000019475	-	85	44.211
ENSAOCG00000022276	-	92	50.000	ENSAOCG00000010498	-	56	48.792
ENSAOCG00000022276	-	96	43.836	ENSAOCG00000017968	snai2	51	43.836
ENSAOCG00000022276	-	99	38.710	ENSAOCG00000012062	znf646	86	38.182
ENSAOCG00000022276	-	93	36.752	ENSAOCG00000006744	-	90	35.593
ENSAOCG00000022276	-	98	68.750	ENSAOCG00000016737	-	99	58.514
ENSAOCG00000022276	-	95	39.936	ENSAOCG00000012653	-	82	41.275
ENSAOCG00000022276	-	97	39.007	ENSAOCG00000004559	-	88	39.007
ENSAOCG00000022276	-	97	43.902	ENSAOCG00000007045	-	83	43.902
ENSAOCG00000022276	-	93	47.101	ENSAOCG00000007134	-	75	45.349
ENSAOCG00000022276	-	97	36.519	ENSAOCG00000001327	-	88	35.821
ENSAOCG00000022276	-	96	50.000	ENSAOCG00000005450	ZNF319	87	50.000
ENSAOCG00000022276	-	93	43.333	ENSAOCG00000002430	-	77	43.333
ENSAOCG00000022276	-	95	49.425	ENSAOCG00000022529	-	50	49.425
ENSAOCG00000022276	-	93	46.512	ENSAOCG00000021187	gfi1b	53	46.512
ENSAOCG00000022276	-	94	48.062	ENSAOCG00000014769	-	80	36.181
ENSAOCG00000022276	-	96	47.500	ENSAOCG00000020624	-	74	47.500
ENSAOCG00000022276	-	99	46.602	ENSAOCG00000013934	-	59	46.602
ENSAOCG00000022276	-	95	63.889	ENSAOCG00000011204	-	50	63.314
ENSAOCG00000022276	-	94	55.629	ENSAOCG00000016088	-	91	55.629
ENSAOCG00000022276	-	95	37.681	ENSAOCG00000008304	zbtb48	50	36.149
ENSAOCG00000022276	-	90	39.726	ENSAOCG00000019753	-	56	39.726
ENSAOCG00000022276	-	94	42.683	ENSAOCG00000021565	-	52	42.683
ENSAOCG00000022276	-	99	58.706	ENSAOCG00000000570	-	78	58.095
ENSAOCG00000022276	-	94	39.068	ENSAOCG00000001341	-	89	38.835
ENSAOCG00000022276	-	97	44.667	ENSAOCG00000001325	-	65	44.667
ENSAOCG00000022276	-	95	46.786	ENSAOCG00000003494	si:dkey-7i4.5	92	46.786
ENSAOCG00000022276	-	99	53.355	ENSAOCG00000022079	-	79	49.057
ENSAOCG00000022276	-	92	34.722	ENSAOCG00000003910	scrt1b	51	34.722
ENSAOCG00000022276	-	94	61.200	ENSAOCG00000020830	-	97	55.272
ENSAOCG00000022276	-	94	37.380	ENSAOCG00000014806	prdm5	75	37.380
ENSAOCG00000022276	-	92	48.693	ENSAOCG00000017595	-	61	48.693
ENSAOCG00000022276	-	94	60.345	ENSAOCG00000000448	-	94	56.831
ENSAOCG00000022276	-	94	44.304	ENSAOCG00000012813	-	72	44.304
ENSAOCG00000022276	-	94	48.062	ENSAOCG00000015944	-	73	36.181
ENSAOCG00000022276	-	93	48.400	ENSAOCG00000000655	-	57	44.333
ENSAOCG00000022276	-	94	42.647	ENSAOCG00000018003	snai1a	51	42.647
ENSAOCG00000022276	-	92	47.126	ENSAOCG00000005965	-	72	47.126
ENSAOCG00000022276	-	95	58.387	ENSAOCG00000013710	-	86	58.387

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000022276	-	97	50.699	ENSACLG00000026538	-	83	50.699	Astatotilapia_calliptera
ENSAOCG00000022276	-	92	54.867	ENSGAGG00000005805	-	84	49.787	Gopherus_agassizii
ENSAOCG00000022276	-	93	48.410	ENSGAGG00000020168	-	74	48.410	Gopherus_agassizii
ENSAOCG00000022276	-	93	59.036	ENSKMAG00000002448	-	85	59.036	Kryptolebias_marmoratus
ENSAOCG00000022276	-	97	54.286	ENSMODG00000024585	-	75	54.286	Monodelphis_domestica
ENSAOCG00000022276	-	97	48.693	ENSPCIG00000019488	-	79	48.693	Phascolarctos_cinereus
ENSAOCG00000022276	-	94	36.795	ENSPFOG00000008519	-	100	37.326	Poecilia_formosa
ENSAOCG00000022276	-	87	51.174	ENSPNYG00000018360	-	80	47.345	Pundamilia_nyererei
ENSAOCG00000022276	-	95	53.763	ENSSLDG00000018598	-	86	53.125	Seriola_lalandi_dorsalis
ENSAOCG00000022276	-	93	48.454	ENSXMAG00000022591	-	72	48.454	Xiphophorus_maculatus