EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000022836 (Gene tree)
Gene ID: 111581566
Gene Symbol: -
Alias: -
Full Name: zinc finger and SCAN domain-containing protein 2-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 7845 bases
Position: chrNXFZ01003727.1:171595-179439
Accession: 111581566
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000017722	zf-C2H2	PF00096.26	1.2e-17	1	3
ENSAOCP00000017722	zf-C2H2	PF00096.26	1.2e-17	2	3
ENSAOCP00000017722	zf-C2H2	PF00096.26	1.2e-17	3	3
ENSAOCP00000017722	zf-met	PF12874.7	4.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000032819	-	4031	XM_023289783	ENSAOCP00000017722	388 (aa)	XP_023145551	UPI000C3002DF

Gene Model

Click here to download ENSAOCG00000022836's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000022836's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000022836	-	54	42.045	ENSAOCG00000005450	ZNF319	99	42.045
ENSAOCG00000022836	-	70	53.704	ENSAOCG00000002795	-	66	53.704
ENSAOCG00000022836	-	65	48.148	ENSAOCG00000014165	-	86	48.148
ENSAOCG00000022836	-	70	53.933	ENSAOCG00000017602	-	66	53.933
ENSAOCG00000022836	-	59	44.681	ENSAOCG00000018484	-	92	45.455
ENSAOCG00000022836	-	70	57.407	ENSAOCG00000013934	-	56	57.407
ENSAOCG00000022836	-	62	45.455	ENSAOCG00000018307	-	93	45.455
ENSAOCG00000022836	-	71	57.500	ENSAOCG00000017595	-	82	57.500
ENSAOCG00000022836	-	64	51.402	ENSAOCG00000010471	-	82	51.402
ENSAOCG00000022836	-	99	48.305	ENSAOCG00000007388	-	97	48.305
ENSAOCG00000022836	-	52	52.427	ENSAOCG00000016905	-	72	52.427
ENSAOCG00000022836	-	72	48.182	ENSAOCG00000016287	-	70	48.182
ENSAOCG00000022836	-	68	48.673	ENSAOCG00000015369	-	96	49.383
ENSAOCG00000022836	-	67	50.943	ENSAOCG00000003277	-	79	50.943

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000022836	-	100	90.000	ENSAPOG00000022184	-	100	90.000	Acanthochromis_polyacanthus
ENSAOCG00000022836	-	100	99.227	ENSAPEG00000003776	-	100	99.227	Amphiprion_percula
ENSAOCG00000022836	-	99	53.043	ENSATEG00000014684	-	88	88.889	Anabas_testudineus
ENSAOCG00000022836	-	58	44.340	ENSACLG00000014365	-	90	44.340	Astatotilapia_calliptera
ENSAOCG00000022836	-	70	47.436	ENSACLG00000008374	-	59	47.436	Astatotilapia_calliptera
ENSAOCG00000022836	-	100	53.461	ENSGAFG00000018506	-	100	54.177	Gambusia_affinis
ENSAOCG00000022836	-	70	47.436	ENSHBUG00000017924	-	60	47.436	Haplochromis_burtoni
ENSAOCG00000022836	-	60	44.186	ENSHCOG00000020309	-	72	44.186	Hippocampus_comes
ENSAOCG00000022836	-	97	48.246	ENSIPUG00000022266	ZNF135	61	48.246	Ictalurus_punctatus
ENSAOCG00000022836	-	100	58.173	ENSKMAG00000000427	-	98	59.189	Kryptolebias_marmoratus
ENSAOCG00000022836	-	99	46.491	ENSKMAG00000015304	-	61	46.491	Kryptolebias_marmoratus
ENSAOCG00000022836	-	99	50.968	ENSLBEG00000026060	-	99	50.753	Labrus_bergylta
ENSAOCG00000022836	-	60	74.026	ENSLBEG00000026457	-	94	83.186	Labrus_bergylta
ENSAOCG00000022836	-	59	49.650	ENSLBEG00000009663	-	90	49.650	Labrus_bergylta
ENSAOCG00000022836	-	70	47.436	ENSMZEG00005011431	-	88	48.077	Maylandia_zebra
ENSAOCG00000022836	-	99	45.614	ENSPFOG00000000667	-	99	45.614	Poecilia_formosa
ENSAOCG00000022836	-	99	45.614	ENSPLAG00000013745	-	82	46.479	Poecilia_latipinna
ENSAOCG00000022836	-	99	53.883	ENSPLAG00000011958	-	99	54.854	Poecilia_latipinna
ENSAOCG00000022836	-	99	52.657	ENSPMEG00000006760	-	99	53.623	Poecilia_mexicana
ENSAOCG00000022836	-	100	52.844	ENSPREG00000021124	-	100	53.555	Poecilia_reticulata
ENSAOCG00000022836	-	99	30.088	ENSPNAG00000011705	-	93	45.679	Pygocentrus_nattereri
ENSAOCG00000022836	-	97	43.411	ENSPNAG00000019887	-	97	43.411	Pygocentrus_nattereri
ENSAOCG00000022836	-	53	59.375	ENSSMAG00000013663	-	96	48.718	Scophthalmus_maximus
ENSAOCG00000022836	-	77	66.869	ENSSPAG00000008950	-	79	66.869	Stegastes_partitus
ENSAOCG00000022836	-	54	53.165	ENSXCOG00000012064	-	53	53.165	Xiphophorus_couchianus
ENSAOCG00000022836	-	62	37.500	ENSXCOG00000013306	-	87	37.500	Xiphophorus_couchianus
ENSAOCG00000022836	-	53	57.005	ENSXMAG00000022894	-	77	57.005	Xiphophorus_maculatus