EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000022957 (Gene tree)
Gene ID: 111576376
Gene Symbol: gfi1aa
Alias: gfi1.1|gfi1a|zgc:113277
Full Name: zinc finger protein Gfi-1-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 2926 bases
Position: chrNXFZ01000844.1:114302-117227
Accession: 111576376
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000017812	zf-C2H2	PF00096.26	1.9e-23	1	5
ENSAOCP00000017812	zf-C2H2	PF00096.26	1.9e-23	2	5
ENSAOCP00000017812	zf-C2H2	PF00096.26	1.9e-23	3	5
ENSAOCP00000017812	zf-C2H2	PF00096.26	1.9e-23	4	5
ENSAOCP00000017812	zf-C2H2	PF00096.26	1.9e-23	5	5
ENSAOCP00000017812	zf-met	PF12874.7	3.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000032854	-	1771	XM_023282019	ENSAOCP00000017812	399 (aa)	XP_023137787	UPI000C31469A

Gene Model

Click here to download ENSAOCG00000022957's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000022957's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000022957	gfi1aa	51	51.389	ENSAOCG00000015369	-	98	46.789
ENSAOCG00000022957	gfi1aa	51	46.377	ENSAOCG00000013578	-	74	46.377
ENSAOCG00000022957	gfi1aa	51	44.720	ENSAOCG00000004559	-	88	44.720
ENSAOCG00000022957	gfi1aa	51	40.909	ENSAOCG00000012062	znf646	62	40.909
ENSAOCG00000022957	gfi1aa	51	41.875	ENSAOCG00000012829	-	52	41.875
ENSAOCG00000022957	gfi1aa	51	43.478	ENSAOCG00000017588	-	50	43.478
ENSAOCG00000022957	gfi1aa	55	44.785	ENSAOCG00000020830	-	96	44.379
ENSAOCG00000022957	gfi1aa	51	38.830	ENSAOCG00000003494	si:dkey-7i4.5	93	38.830
ENSAOCG00000022957	gfi1aa	57	43.671	ENSAOCG00000022675	-	93	44.785
ENSAOCG00000022957	gfi1aa	50	49.412	ENSAOCG00000012813	-	78	49.412
ENSAOCG00000022957	gfi1aa	58	48.673	ENSAOCG00000016905	-	81	48.673
ENSAOCG00000022957	gfi1aa	100	43.387	ENSAOCG00000008339	gfi1ab	100	45.301
ENSAOCG00000022957	gfi1aa	51	40.336	ENSAOCG00000022529	-	52	40.336
ENSAOCG00000022957	gfi1aa	70	45.161	ENSAOCG00000022004	znf236	69	45.161
ENSAOCG00000022957	gfi1aa	51	40.984	ENSAOCG00000014165	-	85	40.984
ENSAOCG00000022957	gfi1aa	55	44.785	ENSAOCG00000013130	-	79	44.785
ENSAOCG00000022957	gfi1aa	58	46.988	ENSAOCG00000018484	-	92	46.988
ENSAOCG00000022957	gfi1aa	79	40.146	ENSAOCG00000015987	-	66	40.146
ENSAOCG00000022957	gfi1aa	50	44.643	ENSAOCG00000013978	-	90	44.643
ENSAOCG00000022957	gfi1aa	51	44.371	ENSAOCG00000022459	-	90	44.371
ENSAOCG00000022957	gfi1aa	51	40.559	ENSAOCG00000007388	-	63	40.559
ENSAOCG00000022957	gfi1aa	51	45.833	ENSAOCG00000017595	-	67	45.833
ENSAOCG00000022957	gfi1aa	61	44.526	ENSAOCG00000017602	-	71	44.526
ENSAOCG00000022957	gfi1aa	58	46.847	ENSAOCG00000022375	-	83	46.847

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000022957	gfi1aa	100	98.747	ENSAPOG00000005043	gfi1aa	100	98.747	Acanthochromis_polyacanthus
ENSAOCG00000022957	gfi1aa	100	87.469	ENSACIG00000021378	gfi1aa	100	87.469	Amphilophus_citrinellus
ENSAOCG00000022957	gfi1aa	100	99.749	ENSAPEG00000014539	gfi1aa	100	99.749	Amphiprion_percula
ENSAOCG00000022957	gfi1aa	100	86.500	ENSATEG00000019026	gfi1aa	99	91.892	Anabas_testudineus
ENSAOCG00000022957	gfi1aa	100	89.223	ENSACLG00000008641	gfi1aa	100	89.223	Astatotilapia_calliptera
ENSAOCG00000022957	gfi1aa	100	65.174	ENSDARG00000020746	gfi1aa	100	63.636	Danio_rerio
ENSAOCG00000022957	gfi1aa	100	85.965	ENSHBUG00000007389	gfi1aa	100	85.965	Haplochromis_burtoni
ENSAOCG00000022957	gfi1aa	100	79.449	ENSKMAG00000002148	gfi1aa	100	79.653	Kryptolebias_marmoratus
ENSAOCG00000022957	gfi1aa	100	82.836	ENSLBEG00000006603	gfi1aa	100	82.836	Labrus_bergylta
ENSAOCG00000022957	gfi1aa	100	83.500	ENSMAMG00000004896	gfi1aa	100	82.000	Mastacembelus_armatus
ENSAOCG00000022957	gfi1aa	100	89.223	ENSMZEG00005004578	gfi1aa	100	89.223	Maylandia_zebra
ENSAOCG00000022957	gfi1aa	82	80.272	ENSMMOG00000006167	gfi1aa	98	80.690	Mola_mola
ENSAOCG00000022957	gfi1aa	100	88.972	ENSNBRG00000002673	gfi1aa	100	88.972	Neolamprologus_brichardi
ENSAOCG00000022957	gfi1aa	100	86.717	ENSPNYG00000002189	gfi1aa	100	86.717	Pundamilia_nyererei
ENSAOCG00000022957	gfi1aa	100	82.064	ENSSMAG00000006797	gfi1aa	100	82.555	Scophthalmus_maximus
ENSAOCG00000022957	gfi1aa	100	89.552	ENSSDUG00000011654	gfi1aa	100	89.552	Seriola_dumerili
ENSAOCG00000022957	gfi1aa	100	86.352	ENSSLDG00000016512	gfi1aa	100	86.352	Seriola_lalandi_dorsalis
ENSAOCG00000022957	gfi1aa	98	96.481	ENSSPAG00000000927	gfi1aa	94	96.481	Stegastes_partitus
ENSAOCG00000022957	gfi1aa	100	82.045	ENSTRUG00000004744	gfi1aa	100	82.045	Takifugu_rubripes