EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000023105 (Gene tree)
Gene ID: 111579149
Gene Symbol: chd1
Alias: fc26h11|fk85d05|si:dkey-106m21.4|wu:fc26h11|wu:fk85d05|zgc:173506
Full Name: chromodomain helicase DNA binding protein 1
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 27827 bases
Position: chrNXFZ01003420.1:87788-115614
Accession: 111579149
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000031393	ResIII	PF04851.15	4.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000027307	-	4764	-	ENSAOCP00000031393	1587 (aa)	-	-
ENSAOCT00000027328	-	7120	XM_023286302	ENSAOCP00000031407	1809 (aa)	XP_023142070	UPI000C318510

Gene Model

Click here to download ENSAOCG00000023105's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000023105's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000023105	chd1	91	59.434	ENSAOCG00000016332	chd2	89	56.713

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000023105	chd1	94	77.531	ENSG00000153922	CHD1	95	83.178	Homo_sapiens
ENSAOCG00000023105	chd1	72	94.965	ENSAPOG00000005764	chd1	98	94.965	Acanthochromis_polyacanthus
ENSAOCG00000023105	chd1	100	98.364	ENSAPEG00000013544	chd1	100	98.364	Amphiprion_percula
ENSAOCG00000023105	chd1	94	91.328	ENSATEG00000010676	chd1	90	91.661	Anabas_testudineus
ENSAOCG00000023105	chd1	79	84.622	ENSAMXG00000010843	chd1	95	84.407	Astyanax_mexicanus
ENSAOCG00000023105	chd1	94	77.531	ENSCATG00000032035	CHD1	89	77.008	Cercocebus_atys
ENSAOCG00000023105	chd1	94	77.531	ENSCSAG00000015339	CHD1	88	77.008	Chlorocebus_sabaeus
ENSAOCG00000023105	chd1	55	77.055	ENSCPBG00000015831	CHD1	86	77.055	Chrysemys_picta_bellii
ENSAOCG00000023105	chd1	92	76.420	ENSCANG00000036916	CHD1	89	74.592	Colobus_angolensis_palliatus
ENSAOCG00000023105	chd1	94	76.486	ENSCGRG00001023943	Chd1	89	76.290	Cricetulus_griseus_chok1gshd
ENSAOCG00000023105	chd1	92	77.555	ENSCGRG00000008652	Chd1	88	76.290	Cricetulus_griseus_crigri
ENSAOCG00000023105	chd1	96	86.623	ENSCSEG00000009553	chd1	97	86.762	Cynoglossus_semilaevis
ENSAOCG00000023105	chd1	77	80.474	ENSEASG00005016110	CHD1	96	74.396	Equus_asinus_asinus
ENSAOCG00000023105	chd1	94	83.278	ENSELUG00000017677	chd1	93	83.081	Esox_lucius
ENSAOCG00000023105	chd1	77	90.033	ENSFHEG00000021164	chd1	89	89.788	Fundulus_heteroclitus
ENSAOCG00000023105	chd1	94	86.957	ENSGMOG00000001537	chd1	90	82.025	Gadus_morhua
ENSAOCG00000023105	chd1	97	74.399	ENSGALG00000031327	-	92	75.752	Gallus_gallus
ENSAOCG00000023105	chd1	83	84.121	ENSGAFG00000019880	chd1	87	85.312	Gambusia_affinis
ENSAOCG00000023105	chd1	94	73.990	ENSGGOG00000011463	CHD1	89	73.403	Gorilla_gorilla
ENSAOCG00000023105	chd1	96	89.228	ENSHCOG00000014222	chd1	96	89.358	Hippocampus_comes
ENSAOCG00000023105	chd1	96	82.892	ENSIPUG00000001369	chd1	96	82.205	Ictalurus_punctatus
ENSAOCG00000023105	chd1	56	80.113	ENSLAFG00000023183	CHD1	81	80.113	Loxodonta_africana
ENSAOCG00000023105	chd1	94	77.531	ENSMFAG00000031226	CHD1	89	77.008	Macaca_fascicularis
ENSAOCG00000023105	chd1	77	80.801	ENSMMUG00000014090	CHD1	85	80.801	Macaca_mulatta
ENSAOCG00000023105	chd1	94	77.531	ENSMNEG00000045073	CHD1	89	77.008	Macaca_nemestrina
ENSAOCG00000023105	chd1	94	73.155	ENSMLEG00000041096	CHD1	89	73.220	Mandrillus_leucophaeus
ENSAOCG00000023105	chd1	79	91.780	ENSMZEG00005010957	chd1	94	91.633	Maylandia_zebra
ENSAOCG00000023105	chd1	92	75.739	ENSMOCG00000019121	Chd1	88	74.901	Microtus_ochrogaster
ENSAOCG00000023105	chd1	77	92.985	ENSMALG00000013317	chd1	86	92.985	Monopterus_albus
ENSAOCG00000023105	chd1	92	77.570	MGP_CAROLIEiJ_G0021099	Chd1	90	75.175	Mus_caroli
ENSAOCG00000023105	chd1	92	77.637	ENSMUSG00000023852	Chd1	88	76.436	Mus_musculus
ENSAOCG00000023105	chd1	92	77.480	MGP_PahariEiJ_G0023414	Chd1	88	76.606	Mus_pahari
ENSAOCG00000023105	chd1	96	88.018	ENSNBRG00000006860	chd1	96	87.832	Neolamprologus_brichardi
ENSAOCG00000023105	chd1	94	75.455	ENSNLEG00000014493	CHD1	89	74.870	Nomascus_leucogenys
ENSAOCG00000023105	chd1	94	77.560	ENSOANG00000004891	CHD1	100	77.433	Ornithorhynchus_anatinus
ENSAOCG00000023105	chd1	56	87.868	ENSORLG00015016725	chd1	83	87.868	Oryzias_latipes_hsok
ENSAOCG00000023105	chd1	94	76.398	ENSPPAG00000043367	CHD1	90	75.748	Pan_paniscus
ENSAOCG00000023105	chd1	94	77.400	ENSPTRG00000017103	CHD1	89	76.797	Pan_troglodytes
ENSAOCG00000023105	chd1	94	77.531	ENSPANG00000006387	CHD1	89	77.008	Papio_anubis
ENSAOCG00000023105	chd1	94	77.261	ENSPKIG00000024719	chd1	92	75.851	Paramormyrops_kingsleyae
ENSAOCG00000023105	chd1	77	90.140	ENSPMGG00000005785	chd1	91	89.893	Periophthalmus_magnuspinnatus
ENSAOCG00000023105	chd1	92	77.622	ENSPEMG00000015939	Chd1	88	76.355	Peromyscus_maniculatus_bairdii
ENSAOCG00000023105	chd1	94	87.144	ENSPREG00000004209	chd1	90	87.078	Poecilia_reticulata
ENSAOCG00000023105	chd1	75	81.749	ENSRNOG00000014434	Chd1	86	80.540	Rattus_norvegicus
ENSAOCG00000023105	chd1	92	77.005	ENSRBIG00000044325	CHD1	89	75.294	Rhinopithecus_bieti
ENSAOCG00000023105	chd1	92	78.691	ENSRROG00000001726	CHD1	89	77.139	Rhinopithecus_roxellana
ENSAOCG00000023105	chd1	79	82.835	ENSSFOG00015007161	chd1	94	83.007	Scleropages_formosus
ENSAOCG00000023105	chd1	77	94.276	ENSSDUG00000018314	chd1	86	94.276	Seriola_dumerili
ENSAOCG00000023105	chd1	57	90.236	ENSSLDG00000017244	chd1	93	90.139	Seriola_lalandi_dorsalis
ENSAOCG00000023105	chd1	77	95.993	ENSSPAG00000007024	chd1	86	95.993	Stegastes_partitus
ENSAOCG00000023105	chd1	81	82.059	ENSSSCG00000014177	CHD1	87	82.059	Sus_scrofa
ENSAOCG00000023105	chd1	94	85.857	ENSTRUG00000010282	chd1	89	86.189	Takifugu_rubripes
ENSAOCG00000023105	chd1	67	90.918	ENSTNIG00000007101	chd1	85	89.891	Tetraodon_nigroviridis
ENSAOCG00000023105	chd1	98	81.456	ENSXCOG00000017184	chd1	92	82.963	Xiphophorus_couchianus
ENSAOCG00000023105	chd1	75	89.975	ENSXMAG00000014538	chd1	87	89.641	Xiphophorus_maculatus