EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000023311 (Gene tree)
Gene ID: 111589021
Gene Symbol: shq1
Alias: zgc:158255
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 39284 bases
Position: chrNXFZ01006127.1:92789-132072
Accession: 111589021
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000018161	SHQ1	PF04925.15	1.1e-68	1	1
ENSAOCP00000018163	SHQ1	PF04925.15	1.1e-68	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000027650	-	2828	XM_023299706	ENSAOCP00000018161	614 (aa)	XP_023155474	UPI000C31026D
ENSAOCT00000027654	-	2786	XM_023299705	ENSAOCP00000018163	614 (aa)	XP_023155473	UPI000C31026D

Gene Model

Click here to download ENSAOCG00000023311's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000023311's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000023311	shq1	70	63.387	ENSG00000144736	SHQ1	96	72.917	Homo_sapiens
ENSAOCG00000023311	shq1	100	95.603	ENSAPOG00000000397	shq1	100	95.603	Acanthochromis_polyacanthus
ENSAOCG00000023311	shq1	90	55.282	ENSAMEG00000015140	SHQ1	77	62.472	Ailuropoda_melanoleuca
ENSAOCG00000023311	shq1	100	80.945	ENSACIG00000021249	shq1	100	80.782	Amphilophus_citrinellus
ENSAOCG00000023311	shq1	100	98.371	ENSAPEG00000021686	shq1	100	98.371	Amphiprion_percula
ENSAOCG00000023311	shq1	98	77.228	ENSATEG00000008475	shq1	98	77.393	Anabas_testudineus
ENSAOCG00000023311	shq1	71	60.850	ENSAPLG00000013926	SHQ1	87	60.850	Anas_platyrhynchos
ENSAOCG00000023311	shq1	71	61.969	ENSACAG00000014809	SHQ1	66	62.416	Anolis_carolinensis
ENSAOCG00000023311	shq1	92	39.655	ENSANAG00000030500	-	74	44.470	Aotus_nancymaae
ENSAOCG00000023311	shq1	93	53.701	ENSANAG00000029241	SHQ1	75	62.471	Aotus_nancymaae
ENSAOCG00000023311	shq1	100	78.013	ENSACLG00000023077	shq1	100	74.806	Astatotilapia_calliptera
ENSAOCG00000023311	shq1	76	63.113	ENSAMXG00000043822	shq1	98	54.032	Astyanax_mexicanus
ENSAOCG00000023311	shq1	93	53.650	ENSBTAG00000005436	SHQ1	76	63.311	Bos_taurus
ENSAOCG00000023311	shq1	69	31.336	WBGene00021655	Y48A5A.1	92	31.490	Caenorhabditis_elegans
ENSAOCG00000023311	shq1	70	62.014	ENSCJAG00000015131	SHQ1	75	62.014	Callithrix_jacchus
ENSAOCG00000023311	shq1	92	53.979	ENSCAFG00000006434	SHQ1	77	63.371	Canis_familiaris
ENSAOCG00000023311	shq1	92	54.152	ENSCAFG00020016743	SHQ1	77	63.596	Canis_lupus_dingo
ENSAOCG00000023311	shq1	93	54.514	ENSCHIG00000012271	SHQ1	69	63.535	Capra_hircus
ENSAOCG00000023311	shq1	83	48.762	ENSCAPG00000009343	SHQ1	62	67.500	Cavia_aperea
ENSAOCG00000023311	shq1	91	53.701	ENSCPOG00000011443	SHQ1	74	62.385	Cavia_porcellus
ENSAOCG00000023311	shq1	91	41.308	ENSCCAG00000036087	-	75	46.897	Cebus_capucinus
ENSAOCG00000023311	shq1	70	53.776	ENSCCAG00000027080	SHQ1	73	53.776	Cebus_capucinus
ENSAOCG00000023311	shq1	70	64.302	ENSCATG00000041238	SHQ1	75	64.302	Cercocebus_atys
ENSAOCG00000023311	shq1	94	52.805	ENSCLAG00000004206	SHQ1	75	63.387	Chinchilla_lanigera
ENSAOCG00000023311	shq1	52	62.080	ENSCSAG00000011514	SHQ1	70	62.069	Chlorocebus_sabaeus
ENSAOCG00000023311	shq1	55	52.312	ENSCHOG00000003273	-	84	70.000	Choloepus_hoffmanni
ENSAOCG00000023311	shq1	70	61.187	ENSCPBG00000006441	SHQ1	71	62.273	Chrysemys_picta_bellii
ENSAOCG00000023311	shq1	64	42.643	ENSCING00000008013	-	96	43.182	Ciona_intestinalis
ENSAOCG00000023311	shq1	66	40.488	ENSCSAVG00000002332	-	98	40.972	Ciona_savignyi
ENSAOCG00000023311	shq1	91	53.952	ENSCANG00000039295	SHQ1	76	63.616	Colobus_angolensis_palliatus
ENSAOCG00000023311	shq1	76	58.368	ENSCGRG00001012583	Shq1	77	61.327	Cricetulus_griseus_chok1gshd
ENSAOCG00000023311	shq1	76	58.368	ENSCGRG00000009849	Shq1	77	61.327	Cricetulus_griseus_crigri
ENSAOCG00000023311	shq1	99	71.795	ENSCSEG00000007829	shq1	99	73.237	Cynoglossus_semilaevis
ENSAOCG00000023311	shq1	98	72.727	ENSCVAG00000020049	shq1	99	72.231	Cyprinodon_variegatus
ENSAOCG00000023311	shq1	93	54.146	ENSDNOG00000033937	SHQ1	77	63.029	Dasypus_novemcinctus
ENSAOCG00000023311	shq1	70	55.835	ENSETEG00000005766	SHQ1	76	55.835	Echinops_telfairi
ENSAOCG00000023311	shq1	62	47.781	ENSEBUG00000005445	shq1	79	49.716	Eptatretus_burgeri
ENSAOCG00000023311	shq1	71	63.170	ENSEASG00005002237	SHQ1	77	63.170	Equus_asinus_asinus
ENSAOCG00000023311	shq1	71	63.170	ENSECAG00000015673	SHQ1	76	63.170	Equus_caballus
ENSAOCG00000023311	shq1	70	63.158	ENSEEUG00000010568	SHQ1	76	63.158	Erinaceus_europaeus
ENSAOCG00000023311	shq1	98	64.013	ENSELUG00000003476	shq1	99	64.123	Esox_lucius
ENSAOCG00000023311	shq1	77	59.548	ENSFCAG00000012781	SHQ1	77	62.247	Felis_catus
ENSAOCG00000023311	shq1	98	53.165	ENSFALG00000013428	SHQ1	72	63.393	Ficedula_albicollis
ENSAOCG00000023311	shq1	66	62.740	ENSFDAG00000005595	SHQ1	68	61.818	Fukomys_damarensis
ENSAOCG00000023311	shq1	98	71.973	ENSFHEG00000017552	shq1	100	72.139	Fundulus_heteroclitus
ENSAOCG00000023311	shq1	63	76.607	ENSGMOG00000007350	shq1	100	75.835	Gadus_morhua
ENSAOCG00000023311	shq1	98	51.817	ENSGALG00000007798	SHQ1	99	50.796	Gallus_gallus
ENSAOCG00000023311	shq1	63	81.491	ENSGACG00000011797	shq1	100	81.234	Gasterosteus_aculeatus
ENSAOCG00000023311	shq1	92	53.528	ENSGGOG00000034818	SHQ1	81	60.338	Gorilla_gorilla
ENSAOCG00000023311	shq1	100	78.013	ENSHBUG00000010857	shq1	100	78.339	Haplochromis_burtoni
ENSAOCG00000023311	shq1	96	51.882	ENSHGLG00000003637	SHQ1	68	62.243	Heterocephalus_glaber_female
ENSAOCG00000023311	shq1	96	50.645	ENSHGLG00100011957	SHQ1	91	52.891	Heterocephalus_glaber_male
ENSAOCG00000023311	shq1	98	67.822	ENSHCOG00000010799	shq1	99	67.987	Hippocampus_comes
ENSAOCG00000023311	shq1	91	53.509	ENSSTOG00000010043	SHQ1	81	60.532	Ictidomys_tridecemlineatus
ENSAOCG00000023311	shq1	70	63.387	ENSJJAG00000017611	Shq1	71	68.750	Jaculus_jaculus
ENSAOCG00000023311	shq1	100	74.797	ENSKMAG00000004457	shq1	100	75.285	Kryptolebias_marmoratus
ENSAOCG00000023311	shq1	92	55.442	ENSLACG00000014243	SHQ1	65	65.376	Latimeria_chalumnae
ENSAOCG00000023311	shq1	98	57.390	ENSLOCG00000009970	shq1	99	56.604	Lepisosteus_oculatus
ENSAOCG00000023311	shq1	66	43.932	ENSMFAG00000037396	-	73	43.619	Macaca_fascicularis
ENSAOCG00000023311	shq1	91	54.545	ENSMFAG00000039148	SHQ1	81	61.392	Macaca_fascicularis
ENSAOCG00000023311	shq1	70	44.804	ENSMMUG00000021761	-	73	43.619	Macaca_mulatta
ENSAOCG00000023311	shq1	83	52.897	ENSMMUG00000009571	SHQ1	77	60.094	Macaca_mulatta
ENSAOCG00000023311	shq1	91	54.545	ENSMNEG00000032667	SHQ1	81	61.392	Macaca_nemestrina
ENSAOCG00000023311	shq1	66	63.942	ENSMLEG00000038493	SHQ1	75	63.844	Mandrillus_leucophaeus
ENSAOCG00000023311	shq1	99	78.205	ENSMAMG00000023432	shq1	96	78.526	Mastacembelus_armatus
ENSAOCG00000023311	shq1	100	77.850	ENSMZEG00005008649	shq1	100	78.176	Maylandia_zebra
ENSAOCG00000023311	shq1	98	52.632	ENSMGAG00000009640	SHQ1	72	62.700	Meleagris_gallopavo
ENSAOCG00000023311	shq1	72	60.889	ENSMAUG00000022030	Shq1	79	60.222	Mesocricetus_auratus
ENSAOCG00000023311	shq1	91	52.560	ENSMICG00000009224	SHQ1	75	62.471	Microcebus_murinus
ENSAOCG00000023311	shq1	73	60.965	ENSMOCG00000017836	Shq1	79	60.889	Microtus_ochrogaster
ENSAOCG00000023311	shq1	99	74.587	ENSMMOG00000010569	shq1	100	74.422	Mola_mola
ENSAOCG00000023311	shq1	78	56.364	ENSMODG00000003926	SHQ1	78	60.046	Monodelphis_domestica
ENSAOCG00000023311	shq1	99	76.847	ENSMALG00000008870	shq1	99	77.504	Monopterus_albus
ENSAOCG00000023311	shq1	73	60.440	MGP_CAROLIEiJ_G0028689	Shq1	78	60.938	Mus_caroli
ENSAOCG00000023311	shq1	77	60.083	ENSMUSG00000035378	Shq1	78	62.022	Mus_musculus
ENSAOCG00000023311	shq1	70	62.700	MGP_PahariEiJ_G0022440	Shq1	76	62.700	Mus_pahari
ENSAOCG00000023311	shq1	77	59.834	MGP_SPRETEiJ_G0029717	Shq1	78	61.830	Mus_spretus
ENSAOCG00000023311	shq1	90	53.873	ENSMPUG00000017006	SHQ1	74	63.158	Mustela_putorius_furo
ENSAOCG00000023311	shq1	82	52.000	ENSMLUG00000013539	SHQ1	74	61.026	Myotis_lucifugus
ENSAOCG00000023311	shq1	91	46.564	ENSNGAG00000023317	Shq1	77	55.102	Nannospalax_galili
ENSAOCG00000023311	shq1	86	75.810	ENSNBRG00000024004	shq1	100	76.190	Neolamprologus_brichardi
ENSAOCG00000023311	shq1	91	54.419	ENSNLEG00000002731	SHQ1	79	61.255	Nomascus_leucogenys
ENSAOCG00000023311	shq1	60	58.333	ENSMEUG00000009350	-	70	58.333	Notamacropus_eugenii
ENSAOCG00000023311	shq1	94	52.316	ENSODEG00000009192	SHQ1	55	60.251	Octodon_degus
ENSAOCG00000023311	shq1	99	78.793	ENSONIG00000020264	shq1	100	79.119	Oreochromis_niloticus
ENSAOCG00000023311	shq1	90	55.221	ENSOCUG00000016695	SHQ1	74	63.387	Oryctolagus_cuniculus
ENSAOCG00000023311	shq1	99	64.745	ENSORLG00000023538	shq1	99	64.250	Oryzias_latipes
ENSAOCG00000023311	shq1	98	65.837	ENSORLG00020003697	shq1	98	65.340	Oryzias_latipes_hni
ENSAOCG00000023311	shq1	99	64.745	ENSORLG00015021040	shq1	99	63.262	Oryzias_latipes_hsok
ENSAOCG00000023311	shq1	95	68.034	ENSOMEG00000001225	shq1	97	67.350	Oryzias_melastigma
ENSAOCG00000023311	shq1	78	59.717	ENSOGAG00000003898	SHQ1	77	63.409	Otolemur_garnettii
ENSAOCG00000023311	shq1	93	52.881	ENSOARG00000009547	SHQ1	77	62.444	Ovis_aries
ENSAOCG00000023311	shq1	92	52.901	ENSPPAG00000027714	SHQ1	75	63.616	Pan_paniscus
ENSAOCG00000023311	shq1	91	40.636	ENSPPAG00000043263	-	73	44.931	Pan_paniscus
ENSAOCG00000023311	shq1	90	54.049	ENSPPRG00000004769	SHQ1	77	62.247	Panthera_pardus
ENSAOCG00000023311	shq1	90	51.332	ENSPTIG00000011478	SHQ1	76	58.864	Panthera_tigris_altaica
ENSAOCG00000023311	shq1	76	43.882	ENSPTRG00000048303	-	73	44.111	Pan_troglodytes
ENSAOCG00000023311	shq1	92	52.632	ENSPTRG00000015106	SHQ1	75	63.616	Pan_troglodytes
ENSAOCG00000023311	shq1	70	64.302	ENSPANG00000002881	SHQ1	75	64.302	Papio_anubis
ENSAOCG00000023311	shq1	71	61.969	ENSPSIG00000005536	SHQ1	73	62.640	Pelodiscus_sinensis
ENSAOCG00000023311	shq1	99	62.276	ENSPMGG00000008838	shq1	99	63.132	Periophthalmus_magnuspinnatus
ENSAOCG00000023311	shq1	71	61.074	ENSPEMG00000000251	Shq1	78	60.538	Peromyscus_maniculatus_bairdii
ENSAOCG00000023311	shq1	70	56.393	ENSPMAG00000005372	shq1	98	57.306	Petromyzon_marinus
ENSAOCG00000023311	shq1	91	70.430	ENSPFOG00000003118	shq1	98	69.052	Poecilia_formosa
ENSAOCG00000023311	shq1	76	68.094	ENSPMEG00000011076	shq1	97	67.726	Poecilia_mexicana
ENSAOCG00000023311	shq1	83	69.020	ENSPREG00000000591	shq1	92	67.710	Poecilia_reticulata
ENSAOCG00000023311	shq1	92	54.045	ENSPPYG00000013717	SHQ1	75	63.844	Pongo_abelii
ENSAOCG00000023311	shq1	90	53.472	ENSPCAG00000009035	SHQ1	77	63.677	Procavia_capensis
ENSAOCG00000023311	shq1	70	63.470	ENSPCOG00000008415	SHQ1	75	63.470	Propithecus_coquereli
ENSAOCG00000023311	shq1	90	55.694	ENSPVAG00000017392	SHQ1	76	63.158	Pteropus_vampyrus
ENSAOCG00000023311	shq1	100	78.339	ENSPNYG00000003878	shq1	100	78.664	Pundamilia_nyererei
ENSAOCG00000023311	shq1	98	57.423	ENSPNAG00000026840	shq1	99	56.844	Pygocentrus_nattereri
ENSAOCG00000023311	shq1	70	62.014	ENSRNOG00000005433	Shq1	72	62.014	Rattus_norvegicus
ENSAOCG00000023311	shq1	91	52.604	ENSRBIG00000026280	SHQ1	75	62.093	Rhinopithecus_bieti
ENSAOCG00000023311	shq1	91	54.545	ENSRROG00000034126	SHQ1	76	64.531	Rhinopithecus_roxellana
ENSAOCG00000023311	shq1	70	55.606	ENSSBOG00000021038	SHQ1	73	55.835	Saimiri_boliviensis_boliviensis
ENSAOCG00000023311	shq1	70	62.557	ENSSHAG00000015077	SHQ1	77	61.625	Sarcophilus_harrisii
ENSAOCG00000023311	shq1	73	71.300	ENSSFOG00015016241	shq1	79	72.311	Scleropages_formosus
ENSAOCG00000023311	shq1	100	78.176	ENSSMAG00000016151	shq1	100	78.827	Scophthalmus_maximus
ENSAOCG00000023311	shq1	100	79.194	ENSSDUG00000011986	shq1	100	79.677	Seriola_dumerili
ENSAOCG00000023311	shq1	100	77.544	ENSSLDG00000013908	shq1	100	78.837	Seriola_lalandi_dorsalis
ENSAOCG00000023311	shq1	93	46.416	ENSSARG00000007119	SHQ1	60	59.942	Sorex_araneus
ENSAOCG00000023311	shq1	76	49.896	ENSSPUG00000011526	-	65	60.745	Sphenodon_punctatus
ENSAOCG00000023311	shq1	92	54.231	ENSSSCG00000011518	SHQ1	77	62.054	Sus_scrofa
ENSAOCG00000023311	shq1	66	64.916	ENSTGUG00000009933	SHQ1	76	64.545	Taeniopygia_guttata
ENSAOCG00000023311	shq1	99	66.446	ENSTRUG00000009446	shq1	99	64.686	Takifugu_rubripes
ENSAOCG00000023311	shq1	76	70.000	ENSTNIG00000007354	shq1	98	72.135	Tetraodon_nigroviridis
ENSAOCG00000023311	shq1	90	54.419	ENSTTRG00000005320	SHQ1	77	62.584	Tursiops_truncatus
ENSAOCG00000023311	shq1	90	54.301	ENSUMAG00000024031	SHQ1	76	62.243	Ursus_maritimus
ENSAOCG00000023311	shq1	73	51.082	ENSVPAG00000004880	SHQ1	60	62.187	Vicugna_pacos
ENSAOCG00000023311	shq1	90	53.792	ENSVVUG00000013906	SHQ1	75	63.387	Vulpes_vulpes
ENSAOCG00000023311	shq1	70	62.587	ENSXETG00000032215	shq1	71	62.356	Xenopus_tropicalis