EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAOCG00000023376 (Gene tree)
Gene ID
111569726
Gene Symbol
rpa1
Alias
wu:fi14b08|zgc:55337|zgc:77092
Full Name
replication protein A1
Gene Type
protein_coding
Species
Amphiprion_ocellaris
Status
putative
Strand
Plus strand
Length
28944 bases
Position
chrNXFZ01002390.1:359426-388369
Accession
111569726
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAOCP00000018194tRNA_anti-codonPF01336.254.5e-1211
ENSAOCP00000018205tRNA_anti-codonPF01336.255.2e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAOCT00000033028-3005XM_023272036ENSAOCP00000018205600 (aa)XP_023127804UPI000C319BFC
ENSAOCT00000033024-1683-ENSAOCP00000018194560 (aa)--
Gene Model
Click here to download ENSAOCG00000023376's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000023376's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAOCG00000023376rpa19469.683ENSAOCG00000009003RPA19959.317
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAOCG00000023376rpa110094.667ENSAPOG00000011658rpa110094.667Acanthochromis_polyacanthus
ENSAOCG00000023376rpa19469.144ENSAPOG00000019409RPA19064.139Acanthochromis_polyacanthus
ENSAOCG00000023376rpa19962.995ENSAMEG00000007706RPA19663.575Ailuropoda_melanoleuca
ENSAOCG00000023376rpa110075.309ENSACIG00000007277rpa19978.299Amphilophus_citrinellus
ENSAOCG00000023376rpa19962.069ENSACIG00000012881RPA19962.692Amphilophus_citrinellus
ENSAOCG00000023376rpa110099.000ENSAPEG00000008634rpa110099.000Amphiprion_percula
ENSAOCG00000023376rpa19370.872ENSAPEG00000019132RPA19957.815Amphiprion_percula
ENSAOCG00000023376rpa110086.477ENSATEG00000022024rpa110085.789Anabas_testudineus
ENSAOCG00000023376rpa19671.171ENSATEG00000006443RPA19960.526Anabas_testudineus
ENSAOCG00000023376rpa19954.294ENSAPLG00000012442RPA19954.978Anas_platyrhynchos
ENSAOCG00000023376rpa19957.168ENSACAG00000014490RPA19857.591Anolis_carolinensis
ENSAOCG00000023376rpa19965.241ENSANAG00000023456RPA19864.587Aotus_nancymaae
ENSAOCG00000023376rpa19962.205ENSACLG00000005223RPA19962.205Astatotilapia_calliptera
ENSAOCG00000023376rpa19989.029ENSACLG00000006640rpa19989.029Astatotilapia_calliptera
ENSAOCG00000023376rpa110077.321ENSAMXG00000008418rpa19977.833Astyanax_mexicanus
ENSAOCG00000023376rpa19963.276ENSBTAG00000009711RPA19962.951Bos_taurus
ENSAOCG00000023376rpa18630.966WBGene00017546rpa-17530.966Caenorhabditis_elegans
ENSAOCG00000023376rpa19962.522ENSCJAG00000001848RPA19962.215Callithrix_jacchus
ENSAOCG00000023376rpa19963.502ENSCAFG00000019249RPA19963.830Canis_familiaris
ENSAOCG00000023376rpa19963.502ENSCAFG00020009847RPA19963.830Canis_lupus_dingo
ENSAOCG00000023376rpa19963.103ENSCHIG00000026308RPA19963.443Capra_hircus
ENSAOCG00000023376rpa19962.478ENSTSYG00000003482-9961.463Carlito_syrichta
ENSAOCG00000023376rpa19963.385ENSCPOG00000000035RPA19962.908Cavia_porcellus
ENSAOCG00000023376rpa19951.546ENSCCAG00000010981RPA19952.026Cebus_capucinus
ENSAOCG00000023376rpa19960.035ENSCLAG00000015045-9959.574Chinchilla_lanigera
ENSAOCG00000023376rpa19963.385ENSCLAG00000005185-9963.235Chinchilla_lanigera
ENSAOCG00000023376rpa19952.921ENSCSAG00000013833RPA19953.333Chlorocebus_sabaeus
ENSAOCG00000023376rpa17870.709ENSCHOG00000009454-9970.709Choloepus_hoffmanni
ENSAOCG00000023376rpa19961.897ENSCHOG00000013540-9962.351Choloepus_hoffmanni
ENSAOCG00000023376rpa110063.621ENSCPBG00000020377RPA19964.572Chrysemys_picta_bellii
ENSAOCG00000023376rpa19943.706ENSCING00000023482-9943.657Ciona_intestinalis
ENSAOCG00000023376rpa19966.132ENSCANG00000030911RPA19964.237Colobus_angolensis_palliatus
ENSAOCG00000023376rpa19964.261ENSCGRG00001008197Rpa19963.132Cricetulus_griseus_chok1gshd
ENSAOCG00000023376rpa18567.629ENSCGRG00000000582Rpa19965.613Cricetulus_griseus_crigri
ENSAOCG00000023376rpa110078.748ENSCSEG00000013066rpa110078.748Cynoglossus_semilaevis
ENSAOCG00000023376rpa19955.627ENSCSEG00000012726RPA19956.799Cynoglossus_semilaevis
ENSAOCG00000023376rpa19982.450ENSCVAG00000019431rpa19982.781Cyprinodon_variegatus
ENSAOCG00000023376rpa19571.256ENSCVAG00000013446-8671.256Cyprinodon_variegatus
ENSAOCG00000023376rpa19976.000ENSDARG00000003938rpa19976.000Danio_rerio
ENSAOCG00000023376rpa110063.683ENSDNOG00000017218RPA19962.993Dasypus_novemcinctus
ENSAOCG00000023376rpa19963.621ENSDORG00000006199Rpa19963.458Dipodomys_ordii
ENSAOCG00000023376rpa19942.756FBgn0010173RpA-709942.244Drosophila_melanogaster
ENSAOCG00000023376rpa18275.510ENSETEG00000017608RPA18275.510Echinops_telfairi
ENSAOCG00000023376rpa19964.758ENSEASG00005009372RPA19964.937Equus_asinus_asinus
ENSAOCG00000023376rpa19962.931ENSECAG00000023886RPA19963.011Equus_caballus
ENSAOCG00000023376rpa17470.883ENSEEUG00000002186-6871.053Erinaceus_europaeus
ENSAOCG00000023376rpa19980.826ENSELUG00000021071rpa19980.826Esox_lucius
ENSAOCG00000023376rpa19362.030ENSELUG00000006136RPA110062.030Esox_lucius
ENSAOCG00000023376rpa19962.582ENSFCAG00000006306RPA19962.582Felis_catus
ENSAOCG00000023376rpa19962.976ENSFALG00000006575RPA19962.848Ficedula_albicollis
ENSAOCG00000023376rpa19964.076ENSFDAG00000007720RPA19963.725Fukomys_damarensis
ENSAOCG00000023376rpa19983.416ENSFHEG00000003580rpa19983.416Fundulus_heteroclitus
ENSAOCG00000023376rpa19977.778ENSGMOG00000010382rpa19976.047Gadus_morhua
ENSAOCG00000023376rpa19961.872ENSGALG00000003072RPA19961.349Gallus_gallus
ENSAOCG00000023376rpa19959.356ENSGAFG00000020953RPA19959.695Gambusia_affinis
ENSAOCG00000023376rpa19982.471ENSGAFG00000012916rpa19982.471Gambusia_affinis
ENSAOCG00000023376rpa110082.919ENSGACG00000010856rpa110082.919Gasterosteus_aculeatus
ENSAOCG00000023376rpa110062.931ENSGAGG00000013611RPA19963.192Gopherus_agassizii
ENSAOCG00000023376rpa19965.480ENSGGOG00000014186RPA19963.561Gorilla_gorilla
ENSAOCG00000023376rpa110089.185ENSHBUG00000017773rpa19989.185Haplochromis_burtoni
ENSAOCG00000023376rpa19958.451ENSHBUG00000009348RPA19858.377Haplochromis_burtoni
ENSAOCG00000023376rpa19963.385ENSHGLG00000008846RPA19963.235Heterocephalus_glaber_female
ENSAOCG00000023376rpa19953.670ENSHGLG00100002005-9953.834Heterocephalus_glaber_male
ENSAOCG00000023376rpa19959.655ENSHGLG00100000799-9959.543Heterocephalus_glaber_male
ENSAOCG00000023376rpa19963.385ENSHGLG00100017755-9963.235Heterocephalus_glaber_male
ENSAOCG00000023376rpa19946.702ENSHCOG00000000351RPA19844.868Hippocampus_comes
ENSAOCG00000023376rpa19974.754ENSHCOG00000001401rpa19974.837Hippocampus_comes
ENSAOCG00000023376rpa19976.159ENSIPUG00000004400rpa19976.159Ictalurus_punctatus
ENSAOCG00000023376rpa19860.714ENSSTOG00000022475RPA19861.565Ictidomys_tridecemlineatus
ENSAOCG00000023376rpa19963.966ENSJJAG00000000876Rpa19864.358Jaculus_jaculus
ENSAOCG00000023376rpa19980.624ENSKMAG00000005605rpa19980.952Kryptolebias_marmoratus
ENSAOCG00000023376rpa19961.526ENSKMAG00000000234RPA19961.526Kryptolebias_marmoratus
ENSAOCG00000023376rpa19984.245ENSLBEG00000021604rpa19984.245Labrus_bergylta
ENSAOCG00000023376rpa19769.954ENSLBEG00000002281RPA18369.954Labrus_bergylta
ENSAOCG00000023376rpa18163.457ENSLACG00000007210RPA19362.987Latimeria_chalumnae
ENSAOCG00000023376rpa19973.223ENSLOCG00000006397rpa19973.388Lepisosteus_oculatus
ENSAOCG00000023376rpa19962.245ENSLAFG00000015354RPA19961.290Loxodonta_africana
ENSAOCG00000023376rpa18262.033ENSMFAG00000036138-9862.626Macaca_fascicularis
ENSAOCG00000023376rpa19959.859ENSMMUG00000002442-9958.911Macaca_mulatta
ENSAOCG00000023376rpa19964.076ENSMMUG00000011604-9963.591Macaca_mulatta
ENSAOCG00000023376rpa18766.302ENSMNEG00000029837-9766.302Macaca_nemestrina
ENSAOCG00000023376rpa19963.385ENSMNEG00000031632-9863.837Macaca_nemestrina
ENSAOCG00000023376rpa19960.481ENSMLEG00000038768-9860.943Mandrillus_leucophaeus
ENSAOCG00000023376rpa110088.500ENSMAMG00000017993rpa110088.500Mastacembelus_armatus
ENSAOCG00000023376rpa19770.930ENSMAMG00000020097RPA19958.921Mastacembelus_armatus
ENSAOCG00000023376rpa19962.205ENSMZEG00005024731RPA19962.205Maylandia_zebra
ENSAOCG00000023376rpa110089.185ENSMZEG00005007551rpa19989.185Maylandia_zebra
ENSAOCG00000023376rpa19961.872ENSMGAG00000005315RPA19861.755Meleagris_gallopavo
ENSAOCG00000023376rpa19964.298ENSMAUG00000010474Rpa19864.516Mesocricetus_auratus
ENSAOCG00000023376rpa19963.621ENSMICG00000012867RPA19963.072Microcebus_murinus
ENSAOCG00000023376rpa19963.605ENSMOCG00000013019Rpa19962.993Microtus_ochrogaster
ENSAOCG00000023376rpa110083.598ENSMMOG00000014292rpa110085.690Mola_mola
ENSAOCG00000023376rpa19963.684ENSMMOG00000010868RPA19862.881Mola_mola
ENSAOCG00000023376rpa110061.790ENSMODG00000010549RPA19961.338Monodelphis_domestica
ENSAOCG00000023376rpa19987.919ENSMALG00000011453rpa19987.919Monopterus_albus
ENSAOCG00000023376rpa19970.872ENSMALG00000001208RPA18670.872Monopterus_albus
ENSAOCG00000023376rpa19963.276MGP_CAROLIEiJ_G0016734Rpa19963.011Mus_caroli
ENSAOCG00000023376rpa19962.628ENSMUSG00000000751Rpa19962.237Mus_musculus
ENSAOCG00000023376rpa19963.636MGP_PahariEiJ_G0017871Rpa19963.192Mus_pahari
ENSAOCG00000023376rpa19962.521MGP_SPRETEiJ_G0017577Rpa19962.136Mus_spretus
ENSAOCG00000023376rpa19962.759ENSMPUG00000013119RPA19962.684Mustela_putorius_furo
ENSAOCG00000023376rpa19963.058ENSMLUG00000006113RPA19962.602Myotis_lucifugus
ENSAOCG00000023376rpa19963.167ENSNGAG00000004522Rpa19563.439Nannospalax_galili
ENSAOCG00000023376rpa19961.905ENSNBRG00000009672RPA19760.870Neolamprologus_brichardi
ENSAOCG00000023376rpa110088.750ENSNBRG00000020595rpa19988.750Neolamprologus_brichardi
ENSAOCG00000023376rpa19962.931ENSNLEG00000017149RPA19963.029Nomascus_leucogenys
ENSAOCG00000023376rpa19953.806ENSMEUG00000006714RPA19754.068Notamacropus_eugenii
ENSAOCG00000023376rpa19962.479ENSODEG00000009038RPA19663.317Octodon_degus
ENSAOCG00000023376rpa110087.765ENSONIG00000013135rpa19987.765Oreochromis_niloticus
ENSAOCG00000023376rpa110063.402ENSOANG00000010880RPA19962.914Ornithorhynchus_anatinus
ENSAOCG00000023376rpa19960.755ENSOCUG00000001504RPA19960.625Oryctolagus_cuniculus
ENSAOCG00000023376rpa19170.233ENSORLG00000003368RPA19957.951Oryzias_latipes
ENSAOCG00000023376rpa19986.311ENSORLG00000004856rpa110086.311Oryzias_latipes
ENSAOCG00000023376rpa19964.407ENSORLG00020015284RPA19764.407Oryzias_latipes_hni
ENSAOCG00000023376rpa19986.477ENSORLG00020008980rpa110086.477Oryzias_latipes_hni
ENSAOCG00000023376rpa19986.477ENSORLG00015013982rpa110086.477Oryzias_latipes_hsok
ENSAOCG00000023376rpa17368.305ENSORLG00015005867-9368.305Oryzias_latipes_hsok
ENSAOCG00000023376rpa19958.484ENSORLG00015020383RPA19958.255Oryzias_latipes_hsok
ENSAOCG00000023376rpa19983.306ENSOMEG00000004704rpa110083.306Oryzias_melastigma
ENSAOCG00000023376rpa19960.035ENSOMEG00000011040RPA19960.035Oryzias_melastigma
ENSAOCG00000023376rpa17575.410ENSOGAG00000029379-9875.410Otolemur_garnettii
ENSAOCG00000023376rpa19963.621ENSOGAG00000005581-9962.866Otolemur_garnettii
ENSAOCG00000023376rpa19963.103ENSOARG00000014479RPA19963.443Ovis_aries
ENSAOCG00000023376rpa19963.103ENSPPAG00000039680RPA19963.192Pan_paniscus
ENSAOCG00000023376rpa19962.418ENSPPRG00000011807RPA19962.418Panthera_pardus
ENSAOCG00000023376rpa19962.418ENSPTIG00000007898RPA19962.418Panthera_tigris_altaica
ENSAOCG00000023376rpa19963.448ENSPTRG00000008539RPA19963.518Pan_troglodytes
ENSAOCG00000023376rpa19963.903ENSPANG00000024592RPA19963.399Papio_anubis
ENSAOCG00000023376rpa19476.007ENSPKIG00000008053rpa19476.357Paramormyrops_kingsleyae
ENSAOCG00000023376rpa110064.310ENSPSIG00000015617RPA19864.527Pelodiscus_sinensis
ENSAOCG00000023376rpa19960.250ENSPMGG00000000543RPA19961.111Periophthalmus_magnuspinnatus
ENSAOCG00000023376rpa19983.513ENSPMGG00000011589rpa19783.513Periophthalmus_magnuspinnatus
ENSAOCG00000023376rpa19964.818ENSPEMG00000021061Rpa19964.262Peromyscus_maniculatus_bairdii
ENSAOCG00000023376rpa19962.414ENSPCIG00000019049RPA19961.990Phascolarctos_cinereus
ENSAOCG00000023376rpa19983.306ENSPFOG00000003987rpa19983.306Poecilia_formosa
ENSAOCG00000023376rpa19983.139ENSPLAG00000004984rpa19983.139Poecilia_latipinna
ENSAOCG00000023376rpa19459.837ENSPLAG00000008844-9659.837Poecilia_latipinna
ENSAOCG00000023376rpa19458.995ENSPMEG00000003627-9659.024Poecilia_mexicana
ENSAOCG00000023376rpa19983.472ENSPMEG00000020602rpa19983.472Poecilia_mexicana
ENSAOCG00000023376rpa19371.625ENSPREG00000010119RPA19956.781Poecilia_reticulata
ENSAOCG00000023376rpa19375.850ENSPREG00000010174rpa19575.714Poecilia_reticulata
ENSAOCG00000023376rpa19963.621ENSPCOG00000001799RPA19962.866Propithecus_coquereli
ENSAOCG00000023376rpa19962.931ENSPVAG00000002149RPA19962.215Pteropus_vampyrus
ENSAOCG00000023376rpa19962.047ENSPNYG00000024165RPA19962.047Pundamilia_nyererei
ENSAOCG00000023376rpa110089.517ENSPNYG00000016316rpa19989.517Pundamilia_nyererei
ENSAOCG00000023376rpa110068.496ENSPNAG00000008599rpa19967.541Pygocentrus_nattereri
ENSAOCG00000023376rpa19971.359ENSRNOG00000003123Rpa19964.474Rattus_norvegicus
ENSAOCG00000023376rpa19963.731ENSRBIG00000036587RPA19962.806Rhinopithecus_bieti
ENSAOCG00000023376rpa19958.722ENSRROG00000043278RPA19958.075Rhinopithecus_roxellana
ENSAOCG00000023376rpa19631.219YAR007CRFA19531.219Saccharomyces_cerevisiae
ENSAOCG00000023376rpa19663.685ENSSBOG00000030233RPA19764.769Saimiri_boliviensis_boliviensis
ENSAOCG00000023376rpa19962.306ENSSHAG00000007969RPA19862.131Sarcophilus_harrisii
ENSAOCG00000023376rpa110078.735ENSSFOG00015005362rpa19279.070Scleropages_formosus
ENSAOCG00000023376rpa19370.709ENSSMAG00000019746RPA19958.079Scophthalmus_maximus
ENSAOCG00000023376rpa110088.833ENSSDUG00000011949rpa110088.833Seriola_dumerili
ENSAOCG00000023376rpa19372.158ENSSDUG00000016358RPA19166.598Seriola_dumerili
ENSAOCG00000023376rpa110089.000ENSSLDG00000011806rpa110089.000Seriola_lalandi_dorsalis
ENSAOCG00000023376rpa19371.694ENSSLDG00000020784RPA18471.396Seriola_lalandi_dorsalis
ENSAOCG00000023376rpa18771.875ENSSARG00000007506RPA18971.875Sorex_araneus
ENSAOCG00000023376rpa110062.326ENSSPUG00000007223RPA19863.095Sphenodon_punctatus
ENSAOCG00000023376rpa19964.171ENSSPAG00000011165RPA19863.328Stegastes_partitus
ENSAOCG00000023376rpa110092.667ENSSPAG00000009903rpa110092.667Stegastes_partitus
ENSAOCG00000023376rpa19965.241ENSSSCG00000017822RPA19963.439Sus_scrofa
ENSAOCG00000023376rpa19962.674ENSTGUG00000005775RPA19962.562Taeniopygia_guttata
ENSAOCG00000023376rpa19368.925ENSTRUG00000000405RPA19360.861Takifugu_rubripes
ENSAOCG00000023376rpa110083.000ENSTRUG00000003616rpa110083.000Takifugu_rubripes
ENSAOCG00000023376rpa110083.007ENSTNIG00000016199rpa19983.170Tetraodon_nigroviridis
ENSAOCG00000023376rpa17871.298ENSTBEG00000002709RPA17371.298Tupaia_belangeri
ENSAOCG00000023376rpa19961.967ENSTTRG00000001169RPA19962.459Tursiops_truncatus
ENSAOCG00000023376rpa18969.231ENSUAMG00000015676RPA19569.231Ursus_americanus
ENSAOCG00000023376rpa19965.658ENSUMAG00000009328RPA19963.235Ursus_maritimus
ENSAOCG00000023376rpa19962.069ENSVPAG00000009443RPA19961.111Vicugna_pacos
ENSAOCG00000023376rpa19963.167ENSVVUG00000021715RPA19963.339Vulpes_vulpes
ENSAOCG00000023376rpa110066.261ENSXETG00000013538rpa19967.049Xenopus_tropicalis
ENSAOCG00000023376rpa19962.857ENSXCOG00000009899-9962.872Xiphophorus_couchianus
ENSAOCG00000023376rpa19382.975ENSXCOG00000010068rpa19482.975Xiphophorus_couchianus
ENSAOCG00000023376rpa19471.396ENSXMAG00000010333RPA18171.396Xiphophorus_maculatus
ENSAOCG00000023376rpa19982.471ENSXMAG00000004102rpa19983.094Xiphophorus_maculatus

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