EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000023599 (Gene tree)
Gene ID: 111565535
Gene Symbol: -
Alias: -
Full Name: RNA-binding Raly-like protein
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 46279 bases
Position: chrNXFZ01001926.1:65510-111788
Accession: 111565535
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000018410	RRM_1	PF00076.22	8.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000027979	-	1781	XM_023265648	ENSAOCP00000018410	292 (aa)	XP_023121416	UPI000C31786A

Gene Model

Click here to download ENSAOCG00000023599's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000023599's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000023599	-	80	59.402	ENSAOCG00000009883	raly	85	52.613
ENSAOCG00000023599	-	100	73.986	ENSAOCG00000001605	-	100	73.986
ENSAOCG00000023599	-	80	52.521	ENSAOCG00000021616	-	92	47.588
ENSAOCG00000023599	-	80	54.098	ENSAOCG00000003896	-	90	47.279

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000023599	-	100	96.918	ENSAPOG00000008744	-	100	96.918	Acanthochromis_polyacanthus
ENSAOCG00000023599	-	97	86.254	ENSACIG00000007143	-	97	86.254	Amphilophus_citrinellus
ENSAOCG00000023599	-	82	74.895	ENSATEG00000023356	-	91	74.895	Anabas_testudineus
ENSAOCG00000023599	-	97	87.119	ENSATEG00000022219	-	93	91.525	Anabas_testudineus
ENSAOCG00000023599	-	100	72.635	ENSACLG00000006949	-	100	72.635	Astatotilapia_calliptera
ENSAOCG00000023599	-	100	97.945	ENSACLG00000011720	-	100	97.945	Astatotilapia_calliptera
ENSAOCG00000023599	-	100	65.101	ENSAMXG00000032617	-	100	65.772	Astyanax_mexicanus
ENSAOCG00000023599	-	100	72.973	ENSAMXG00000019031	-	100	72.973	Astyanax_mexicanus
ENSAOCG00000023599	-	100	83.219	ENSCSEG00000014237	-	100	83.219	Cynoglossus_semilaevis
ENSAOCG00000023599	-	100	95.205	ENSCVAG00000013624	-	100	95.205	Cyprinodon_variegatus
ENSAOCG00000023599	-	100	73.649	ENSCVAG00000018104	-	100	73.986	Cyprinodon_variegatus
ENSAOCG00000023599	-	63	73.224	ENSDARG00000090292	ralyl	81	80.247	Danio_rerio
ENSAOCG00000023599	-	93	63.273	ENSELUG00000001702	-	97	62.153	Esox_lucius
ENSAOCG00000023599	-	57	73.939	ENSGMOG00000005914	-	100	73.939	Gadus_morhua
ENSAOCG00000023599	-	61	79.775	ENSGACG00000004991	-	91	83.735	Gasterosteus_aculeatus
ENSAOCG00000023599	-	100	98.288	ENSHBUG00000010040	-	100	98.288	Haplochromis_burtoni
ENSAOCG00000023599	-	100	72.635	ENSHBUG00000015412	-	100	72.635	Haplochromis_burtoni
ENSAOCG00000023599	-	100	73.311	ENSIPUG00000000507	ralyl	100	74.324	Ictalurus_punctatus
ENSAOCG00000023599	-	100	73.311	ENSKMAG00000018155	-	100	74.324	Kryptolebias_marmoratus
ENSAOCG00000023599	-	100	91.438	ENSKMAG00000022093	-	100	92.123	Kryptolebias_marmoratus
ENSAOCG00000023599	-	100	72.727	ENSLBEG00000011011	-	100	72.973	Labrus_bergylta
ENSAOCG00000023599	-	100	92.808	ENSLBEG00000012873	-	100	92.808	Labrus_bergylta
ENSAOCG00000023599	-	100	70.270	ENSLOCG00000012787	ralyl	99	69.257	Lepisosteus_oculatus
ENSAOCG00000023599	-	99	90.000	ENSMAMG00000001723	-	97	90.000	Mastacembelus_armatus
ENSAOCG00000023599	-	100	97.945	ENSMZEG00005024447	-	100	97.945	Maylandia_zebra
ENSAOCG00000023599	-	98	70.169	ENSMZEG00005018748	-	99	70.847	Maylandia_zebra
ENSAOCG00000023599	-	97	86.486	ENSMMOG00000020441	-	86	88.851	Mola_mola
ENSAOCG00000023599	-	100	95.548	ENSMALG00000019019	-	78	95.548	Monopterus_albus
ENSAOCG00000023599	-	100	72.297	ENSMALG00000012952	-	100	72.297	Monopterus_albus
ENSAOCG00000023599	-	97	86.598	ENSNBRG00000011206	-	97	86.598	Neolamprologus_brichardi
ENSAOCG00000023599	-	98	70.847	ENSNBRG00000011376	-	99	70.847	Neolamprologus_brichardi
ENSAOCG00000023599	-	100	73.986	ENSORLG00000012719	-	100	73.986	Oryzias_latipes
ENSAOCG00000023599	-	100	89.726	ENSORLG00000017934	-	100	89.384	Oryzias_latipes
ENSAOCG00000023599	-	100	73.986	ENSORLG00020004438	-	100	73.986	Oryzias_latipes_hni
ENSAOCG00000023599	-	100	88.699	ENSORLG00020000082	-	100	88.356	Oryzias_latipes_hni
ENSAOCG00000023599	-	100	89.041	ENSORLG00015004280	-	100	88.699	Oryzias_latipes_hsok
ENSAOCG00000023599	-	100	73.986	ENSORLG00015004727	-	100	73.986	Oryzias_latipes_hsok
ENSAOCG00000023599	-	100	89.384	ENSOMEG00000011821	-	100	89.384	Oryzias_melastigma
ENSAOCG00000023599	-	100	73.986	ENSOMEG00000001170	-	100	73.986	Oryzias_melastigma
ENSAOCG00000023599	-	100	73.379	ENSPKIG00000015926	-	100	73.379	Paramormyrops_kingsleyae
ENSAOCG00000023599	-	99	76.689	ENSPMGG00000009532	-	99	75.000	Periophthalmus_magnuspinnatus
ENSAOCG00000023599	-	78	68.240	ENSPMGG00000014481	-	95	70.259	Periophthalmus_magnuspinnatus
ENSAOCG00000023599	-	97	90.136	ENSPFOG00000006120	-	99	90.136	Poecilia_formosa
ENSAOCG00000023599	-	97	85.915	ENSPLAG00000009877	-	76	85.315	Poecilia_latipinna
ENSAOCG00000023599	-	97	73.103	ENSPLAG00000011323	ralyl	100	73.103	Poecilia_latipinna
ENSAOCG00000023599	-	97	85.915	ENSPMEG00000013624	-	80	85.315	Poecilia_mexicana
ENSAOCG00000023599	-	97	73.103	ENSPMEG00000023847	ralyl	100	73.103	Poecilia_mexicana
ENSAOCG00000023599	-	97	71.724	ENSPREG00000001956	ralyl	100	71.724	Poecilia_reticulata
ENSAOCG00000023599	-	97	94.700	ENSPREG00000013805	-	100	88.782	Poecilia_reticulata
ENSAOCG00000023599	-	98	70.169	ENSPNYG00000003548	-	99	70.847	Pundamilia_nyererei
ENSAOCG00000023599	-	97	86.598	ENSPNYG00000008772	-	97	86.598	Pundamilia_nyererei
ENSAOCG00000023599	-	100	68.151	ENSPNAG00000026098	-	100	68.151	Pygocentrus_nattereri
ENSAOCG00000023599	-	100	72.635	ENSPNAG00000000498	-	88	72.391	Pygocentrus_nattereri
ENSAOCG00000023599	-	97	65.734	ENSSFOG00015004575	-	96	66.084	Scleropages_formosus
ENSAOCG00000023599	-	100	75.000	ENSSFOG00015009401	-	100	75.000	Scleropages_formosus
ENSAOCG00000023599	-	97	90.175	ENSSMAG00000015907	-	93	90.175	Scophthalmus_maximus
ENSAOCG00000023599	-	100	72.635	ENSSMAG00000005608	-	100	73.737	Scophthalmus_maximus
ENSAOCG00000023599	-	100	98.973	ENSSDUG00000012473	-	100	98.973	Seriola_dumerili
ENSAOCG00000023599	-	100	73.649	ENSSDUG00000007587	-	100	73.649	Seriola_dumerili
ENSAOCG00000023599	-	100	73.064	ENSSLDG00000020603	-	100	72.973	Seriola_lalandi_dorsalis
ENSAOCG00000023599	-	100	98.630	ENSSLDG00000011534	-	100	98.630	Seriola_lalandi_dorsalis
ENSAOCG00000023599	-	97	81.625	ENSSPAG00000013858	-	96	79.452	Stegastes_partitus
ENSAOCG00000023599	-	97	89.753	ENSTRUG00000003829	-	95	87.986	Takifugu_rubripes
ENSAOCG00000023599	-	97	85.714	ENSTNIG00000005594	-	99	85.714	Tetraodon_nigroviridis
ENSAOCG00000023599	-	100	65.772	ENSXETG00000017729	ralyl	99	65.436	Xenopus_tropicalis
ENSAOCG00000023599	-	97	70.805	ENSXCOG00000015156	-	93	70.805	Xiphophorus_couchianus
ENSAOCG00000023599	-	100	94.863	ENSXMAG00000007614	-	100	94.863	Xiphophorus_maculatus
ENSAOCG00000023599	-	100	74.324	ENSXMAG00000008396	-	100	74.324	Xiphophorus_maculatus