EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000023694 (Gene tree)
Gene ID: 111579120
Gene Symbol: r3hdm2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 59361 bases
Position: chrNXFZ01003413.1:33902-93262
Accession: 111579120
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000031772	R3H	PF01424.22	8.4e-11	1	1
ENSAOCP00000031798	R3H	PF01424.22	8.7e-11	1	1
ENSAOCP00000031794	R3H	PF01424.22	9.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000033163	-	5335	XM_023286255	ENSAOCP00000031798	1075 (aa)	XP_023142023	UPI000C30B2FD
ENSAOCT00000028054	-	4365	XM_023286262	ENSAOCP00000031772	1042 (aa)	XP_023142030	UPI000C300025
ENSAOCT00000028085	-	5281	XM_023286260	ENSAOCP00000031794	1057 (aa)	XP_023142028	UPI000C313F8F

Gene Model

Click here to download ENSAOCG00000023694's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000023694's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000023694	r3hdm2	81	38.975	ENSAOCG00000005192	r3hdm1	82	58.017

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000023694	r3hdm2	99	64.645	ENSG00000179912	R3HDM2	99	64.320	Homo_sapiens
ENSAOCG00000023694	r3hdm2	100	99.535	ENSAPOG00000020341	r3hdm2	100	99.535	Acanthochromis_polyacanthus
ENSAOCG00000023694	r3hdm2	56	37.937	ENSAPOG00000021873	-	70	40.000	Acanthochromis_polyacanthus
ENSAOCG00000023694	r3hdm2	95	67.531	ENSAMEG00000004812	R3HDM2	99	65.055	Ailuropoda_melanoleuca
ENSAOCG00000023694	r3hdm2	94	88.525	ENSACIG00000016146	r3hdm2	98	88.525	Amphilophus_citrinellus
ENSAOCG00000023694	r3hdm2	100	99.716	ENSAPEG00000008851	r3hdm2	100	99.716	Amphiprion_percula
ENSAOCG00000023694	r3hdm2	100	94.455	ENSATEG00000025024	r3hdm2	100	94.455	Anabas_testudineus
ENSAOCG00000023694	r3hdm2	100	55.932	ENSAPLG00000004298	R3HDM2	99	60.035	Anas_platyrhynchos
ENSAOCG00000023694	r3hdm2	99	62.140	ENSACAG00000006388	R3HDM2	99	60.186	Anolis_carolinensis
ENSAOCG00000023694	r3hdm2	97	63.173	ENSANAG00000031310	-	98	60.731	Aotus_nancymaae
ENSAOCG00000023694	r3hdm2	99	65.143	ENSANAG00000025397	-	99	64.700	Aotus_nancymaae
ENSAOCG00000023694	r3hdm2	100	97.302	ENSACLG00000019106	r3hdm2	100	97.302	Astatotilapia_calliptera
ENSAOCG00000023694	r3hdm2	95	70.050	ENSAMXG00000017180	r3hdm2	99	72.300	Astyanax_mexicanus
ENSAOCG00000023694	r3hdm2	99	64.538	ENSBTAG00000018361	R3HDM2	99	63.870	Bos_taurus
ENSAOCG00000023694	r3hdm2	99	64.862	ENSCJAG00000007365	R3HDM2	99	64.516	Callithrix_jacchus
ENSAOCG00000023694	r3hdm2	95	66.435	ENSCAFG00000000215	R3HDM2	99	64.292	Canis_familiaris
ENSAOCG00000023694	r3hdm2	95	67.534	ENSCAFG00020023713	R3HDM2	99	66.052	Canis_lupus_dingo
ENSAOCG00000023694	r3hdm2	95	67.437	ENSCHIG00000014022	R3HDM2	99	65.743	Capra_hircus
ENSAOCG00000023694	r3hdm2	99	64.599	ENSTSYG00000001449	R3HDM2	99	64.824	Carlito_syrichta
ENSAOCG00000023694	r3hdm2	99	66.297	ENSCPOG00000009217	R3HDM2	99	65.651	Cavia_porcellus
ENSAOCG00000023694	r3hdm2	87	66.376	ENSCCAG00000026083	R3HDM2	99	65.649	Cebus_capucinus
ENSAOCG00000023694	r3hdm2	99	65.289	ENSCATG00000036929	R3HDM2	99	65.622	Cercocebus_atys
ENSAOCG00000023694	r3hdm2	99	66.081	ENSCLAG00000011997	R3HDM2	99	66.020	Chinchilla_lanigera
ENSAOCG00000023694	r3hdm2	99	66.542	ENSCSAG00000004911	R3HDM2	99	66.448	Chlorocebus_sabaeus
ENSAOCG00000023694	r3hdm2	73	66.867	ENSCHOG00000005636	R3HDM2	89	68.537	Choloepus_hoffmanni
ENSAOCG00000023694	r3hdm2	95	65.470	ENSCPBG00000013922	R3HDM2	99	63.063	Chrysemys_picta_bellii
ENSAOCG00000023694	r3hdm2	99	65.775	ENSCANG00000043807	R3HDM2	99	65.622	Colobus_angolensis_palliatus
ENSAOCG00000023694	r3hdm2	99	64.549	ENSCGRG00001017324	R3hdm2	99	63.225	Cricetulus_griseus_chok1gshd
ENSAOCG00000023694	r3hdm2	99	64.549	ENSCGRG00000003862	R3hdm2	99	63.225	Cricetulus_griseus_crigri
ENSAOCG00000023694	r3hdm2	100	92.074	ENSCSEG00000010925	r3hdm2	100	91.613	Cynoglossus_semilaevis
ENSAOCG00000023694	r3hdm2	100	91.071	ENSCVAG00000009058	r3hdm2	100	90.150	Cyprinodon_variegatus
ENSAOCG00000023694	r3hdm2	94	73.909	ENSDARG00000102610	r3hdm2	99	74.975	Danio_rerio
ENSAOCG00000023694	r3hdm2	99	65.514	ENSDNOG00000015033	R3HDM2	100	66.910	Dasypus_novemcinctus
ENSAOCG00000023694	r3hdm2	95	63.936	ENSDORG00000011462	R3hdm2	99	64.072	Dipodomys_ordii
ENSAOCG00000023694	r3hdm2	96	67.785	ENSEASG00005007091	R3HDM2	99	66.205	Equus_asinus_asinus
ENSAOCG00000023694	r3hdm2	99	65.836	ENSECAG00000003157	R3HDM2	99	66.020	Equus_caballus
ENSAOCG00000023694	r3hdm2	100	81.591	ENSELUG00000015969	r3hdm2	100	80.250	Esox_lucius
ENSAOCG00000023694	r3hdm2	95	67.661	ENSFCAG00000000192	R3HDM2	98	65.132	Felis_catus
ENSAOCG00000023694	r3hdm2	81	63.781	ENSFALG00000000255	R3HDM2	99	60.954	Ficedula_albicollis
ENSAOCG00000023694	r3hdm2	95	67.885	ENSFDAG00000019385	R3HDM2	99	65.406	Fukomys_damarensis
ENSAOCG00000023694	r3hdm2	100	91.959	ENSFHEG00000016484	r3hdm2	100	91.052	Fundulus_heteroclitus
ENSAOCG00000023694	r3hdm2	52	37.415	ENSFHEG00000007936	-	67	39.368	Fundulus_heteroclitus
ENSAOCG00000023694	r3hdm2	95	83.447	ENSGMOG00000007961	r3hdm2	100	83.836	Gadus_morhua
ENSAOCG00000023694	r3hdm2	99	64.555	ENSGALG00000043736	R3HDM2	99	63.736	Gallus_gallus
ENSAOCG00000023694	r3hdm2	100	92.699	ENSGAFG00000013887	r3hdm2	100	91.697	Gambusia_affinis
ENSAOCG00000023694	r3hdm2	95	93.294	ENSGACG00000006442	r3hdm2	100	93.294	Gasterosteus_aculeatus
ENSAOCG00000023694	r3hdm2	95	64.944	ENSGAGG00000017797	R3HDM2	99	61.822	Gopherus_agassizii
ENSAOCG00000023694	r3hdm2	99	65.289	ENSGGOG00000015007	R3HDM2	99	65.622	Gorilla_gorilla
ENSAOCG00000023694	r3hdm2	95	68.015	ENSHGLG00000010434	-	99	65.743	Heterocephalus_glaber_female
ENSAOCG00000023694	r3hdm2	89	60.403	ENSHGLG00000010421	-	97	58.730	Heterocephalus_glaber_female
ENSAOCG00000023694	r3hdm2	95	58.425	ENSHGLG00100018871	-	98	57.285	Heterocephalus_glaber_male
ENSAOCG00000023694	r3hdm2	95	67.919	ENSHGLG00100004183	-	99	65.651	Heterocephalus_glaber_male
ENSAOCG00000023694	r3hdm2	100	90.161	ENSHCOG00000001142	r3hdm2	97	89.593	Hippocampus_comes
ENSAOCG00000023694	r3hdm2	100	76.817	ENSIPUG00000023873	r3hdm2	100	76.909	Ictalurus_punctatus
ENSAOCG00000023694	r3hdm2	99	61.355	ENSSTOG00000013424	R3HDM2	99	60.283	Ictidomys_tridecemlineatus
ENSAOCG00000023694	r3hdm2	99	65.285	ENSJJAG00000010001	R3hdm2	99	65.041	Jaculus_jaculus
ENSAOCG00000023694	r3hdm2	100	93.253	ENSKMAG00000012695	r3hdm2	97	93.161	Kryptolebias_marmoratus
ENSAOCG00000023694	r3hdm2	100	94.542	ENSLBEG00000013115	r3hdm2	96	94.542	Labrus_bergylta
ENSAOCG00000023694	r3hdm2	50	41.135	ENSLBEG00000002779	-	77	40.577	Labrus_bergylta
ENSAOCG00000023694	r3hdm2	95	67.150	ENSLACG00000019064	r3hdm2	100	65.087	Latimeria_chalumnae
ENSAOCG00000023694	r3hdm2	99	74.261	ENSLOCG00000005976	r3hdm2	99	73.403	Lepisosteus_oculatus
ENSAOCG00000023694	r3hdm2	99	66.388	ENSLAFG00000006510	R3HDM2	99	66.512	Loxodonta_africana
ENSAOCG00000023694	r3hdm2	99	65.867	ENSMFAG00000036385	R3HDM2	99	65.899	Macaca_fascicularis
ENSAOCG00000023694	r3hdm2	99	66.605	ENSMMUG00000021789	R3HDM2	99	66.636	Macaca_mulatta
ENSAOCG00000023694	r3hdm2	99	65.867	ENSMNEG00000025314	R3HDM2	99	65.899	Macaca_nemestrina
ENSAOCG00000023694	r3hdm2	99	65.381	ENSMLEG00000028915	R3HDM2	99	65.714	Mandrillus_leucophaeus
ENSAOCG00000023694	r3hdm2	100	96.115	ENSMAMG00000009793	r3hdm2	100	96.115	Mastacembelus_armatus
ENSAOCG00000023694	r3hdm2	55	38.254	ENSMAMG00000011755	-	73	39.504	Mastacembelus_armatus
ENSAOCG00000023694	r3hdm2	100	97.302	ENSMZEG00005007319	r3hdm2	100	97.302	Maylandia_zebra
ENSAOCG00000023694	r3hdm2	99	64.320	ENSMICG00000012389	R3HDM2	99	63.905	Microcebus_murinus
ENSAOCG00000023694	r3hdm2	99	65.193	ENSMOCG00000014425	R3hdm2	99	63.678	Microtus_ochrogaster
ENSAOCG00000023694	r3hdm2	95	88.698	ENSMMOG00000007448	r3hdm2	99	86.768	Mola_mola
ENSAOCG00000023694	r3hdm2	90	87.805	ENSMALG00000010211	r3hdm2	98	87.755	Monopterus_albus
ENSAOCG00000023694	r3hdm2	99	65.317	MGP_CAROLIEiJ_G0015896	R3hdm2	99	65.133	Mus_caroli
ENSAOCG00000023694	r3hdm2	99	65.593	ENSMUSG00000025404	R3hdm2	99	65.317	Mus_musculus
ENSAOCG00000023694	r3hdm2	95	67.052	MGP_PahariEiJ_G0031189	R3hdm2	99	65.041	Mus_pahari
ENSAOCG00000023694	r3hdm2	99	65.501	MGP_SPRETEiJ_G0016722	R3hdm2	99	65.225	Mus_spretus
ENSAOCG00000023694	r3hdm2	98	65.514	ENSMPUG00000001818	R3HDM2	96	65.023	Mustela_putorius_furo
ENSAOCG00000023694	r3hdm2	99	65.867	ENSMLUG00000004980	R3HDM2	99	65.651	Myotis_lucifugus
ENSAOCG00000023694	r3hdm2	99	65.989	ENSNGAG00000018800	R3hdm2	99	65.928	Nannospalax_galili
ENSAOCG00000023694	r3hdm2	94	89.115	ENSNBRG00000004483	r3hdm2	100	89.115	Neolamprologus_brichardi
ENSAOCG00000023694	r3hdm2	99	65.743	ENSNLEG00000017351	R3HDM2	99	65.714	Nomascus_leucogenys
ENSAOCG00000023694	r3hdm2	99	57.196	ENSMEUG00000008588	R3HDM2	99	56.313	Notamacropus_eugenii
ENSAOCG00000023694	r3hdm2	99	59.924	ENSOPRG00000013670	R3HDM2	99	59.447	Ochotona_princeps
ENSAOCG00000023694	r3hdm2	100	93.001	ENSONIG00000005075	r3hdm2	100	93.001	Oreochromis_niloticus
ENSAOCG00000023694	r3hdm2	99	65.930	ENSOCUG00000013258	R3HDM2	99	65.930	Oryctolagus_cuniculus
ENSAOCG00000023694	r3hdm2	100	90.842	ENSORLG00000005502	r3hdm2	100	90.296	Oryzias_latipes
ENSAOCG00000023694	r3hdm2	100	90.875	ENSORLG00020017069	r3hdm2	100	90.320	Oryzias_latipes_hni
ENSAOCG00000023694	r3hdm2	100	90.969	ENSORLG00015012735	r3hdm2	100	90.414	Oryzias_latipes_hsok
ENSAOCG00000023694	r3hdm2	100	84.165	ENSOMEG00000018079	r3hdm2	99	83.781	Oryzias_melastigma
ENSAOCG00000023694	r3hdm2	96	64.946	ENSOGAG00000012055	R3HDM2	99	63.390	Otolemur_garnettii
ENSAOCG00000023694	r3hdm2	96	57.143	ENSOGAG00000027966	-	99	56.043	Otolemur_garnettii
ENSAOCG00000023694	r3hdm2	99	64.544	ENSOARG00000006929	R3HDM2	99	63.973	Ovis_aries
ENSAOCG00000023694	r3hdm2	99	65.473	ENSPPAG00000034395	R3HDM2	99	65.806	Pan_paniscus
ENSAOCG00000023694	r3hdm2	95	66.070	ENSPPRG00000009240	R3HDM2	99	63.223	Panthera_pardus
ENSAOCG00000023694	r3hdm2	95	66.070	ENSPTIG00000008752	R3HDM2	99	63.223	Panthera_tigris_altaica
ENSAOCG00000023694	r3hdm2	99	65.959	ENSPTRG00000046457	R3HDM2	99	65.991	Pan_troglodytes
ENSAOCG00000023694	r3hdm2	95	66.040	ENSPANG00000024002	R3HDM2	97	65.706	Papio_anubis
ENSAOCG00000023694	r3hdm2	100	80.997	ENSPKIG00000003171	r3hdm2	100	81.562	Paramormyrops_kingsleyae
ENSAOCG00000023694	r3hdm2	94	87.295	ENSPMGG00000007061	r3hdm2	99	84.778	Periophthalmus_magnuspinnatus
ENSAOCG00000023694	r3hdm2	99	65.250	ENSPEMG00000015964	R3hdm2	99	64.635	Peromyscus_maniculatus_bairdii
ENSAOCG00000023694	r3hdm2	99	62.806	ENSPCIG00000023841	R3HDM2	99	63.403	Phascolarctos_cinereus
ENSAOCG00000023694	r3hdm2	94	93.011	ENSPFOG00000006077	r3hdm2	92	96.866	Poecilia_formosa
ENSAOCG00000023694	r3hdm2	100	92.763	ENSPLAG00000002971	r3hdm2	100	91.839	Poecilia_latipinna
ENSAOCG00000023694	r3hdm2	100	92.763	ENSPMEG00000005330	r3hdm2	100	91.839	Poecilia_mexicana
ENSAOCG00000023694	r3hdm2	100	92.329	ENSPREG00000008424	r3hdm2	100	91.421	Poecilia_reticulata
ENSAOCG00000023694	r3hdm2	97	61.052	ENSPPYG00000004685	R3HDM2	80	61.089	Pongo_abelii
ENSAOCG00000023694	r3hdm2	88	80.505	ENSPCAG00000014642	R3HDM2	92	81.588	Procavia_capensis
ENSAOCG00000023694	r3hdm2	99	64.347	ENSPCOG00000013201	R3HDM2	99	64.442	Propithecus_coquereli
ENSAOCG00000023694	r3hdm2	99	66.113	ENSPVAG00000003967	R3HDM2	99	65.743	Pteropus_vampyrus
ENSAOCG00000023694	r3hdm2	94	86.714	ENSPNYG00000013479	r3hdm2	100	85.512	Pundamilia_nyererei
ENSAOCG00000023694	r3hdm2	100	75.678	ENSPNAG00000017473	r3hdm2	100	77.868	Pygocentrus_nattereri
ENSAOCG00000023694	r3hdm2	95	66.538	ENSRNOG00000007801	R3hdm2	99	64.646	Rattus_norvegicus
ENSAOCG00000023694	r3hdm2	99	63.238	ENSRBIG00000037403	R3HDM2	99	62.322	Rhinopithecus_bieti
ENSAOCG00000023694	r3hdm2	99	66.697	ENSRROG00000022271	R3HDM2	99	65.714	Rhinopithecus_roxellana
ENSAOCG00000023694	r3hdm2	99	65.143	ENSSBOG00000023547	R3HDM2	99	64.320	Saimiri_boliviensis_boliviensis
ENSAOCG00000023694	r3hdm2	99	63.871	ENSSHAG00000003511	R3HDM2	99	63.952	Sarcophilus_harrisii
ENSAOCG00000023694	r3hdm2	95	79.154	ENSSFOG00015011219	r3hdm2	99	78.248	Scleropages_formosus
ENSAOCG00000023694	r3hdm2	100	94.698	ENSSMAG00000012073	r3hdm2	100	94.698	Scophthalmus_maximus
ENSAOCG00000023694	r3hdm2	100	97.356	ENSSDUG00000019269	r3hdm2	100	97.356	Seriola_dumerili
ENSAOCG00000023694	r3hdm2	100	97.488	ENSSLDG00000005252	r3hdm2	100	97.488	Seriola_lalandi_dorsalis
ENSAOCG00000023694	r3hdm2	96	54.545	ENSSARG00000003958	R3HDM2	97	54.043	Sorex_araneus
ENSAOCG00000023694	r3hdm2	99	61.019	ENSSPUG00000014132	R3HDM2	99	58.965	Sphenodon_punctatus
ENSAOCG00000023694	r3hdm2	100	99.243	ENSSPAG00000022594	r3hdm2	100	99.243	Stegastes_partitus
ENSAOCG00000023694	r3hdm2	96	66.535	ENSSSCG00000026498	R3HDM2	100	66.884	Sus_scrofa
ENSAOCG00000023694	r3hdm2	72	64.751	ENSTGUG00000015881	R3HDM2	99	63.252	Taeniopygia_guttata
ENSAOCG00000023694	r3hdm2	95	86.176	ENSTRUG00000015075	r3hdm2	99	84.794	Takifugu_rubripes
ENSAOCG00000023694	r3hdm2	91	98.045	ENSTNIG00000007057	r3hdm2	90	98.045	Tetraodon_nigroviridis
ENSAOCG00000023694	r3hdm2	82	63.787	ENSTBEG00000015967	R3HDM2	78	63.787	Tupaia_belangeri
ENSAOCG00000023694	r3hdm2	92	71.963	ENSTTRG00000013082	R3HDM2	87	70.259	Tursiops_truncatus
ENSAOCG00000023694	r3hdm2	95	67.843	ENSUAMG00000020913	R3HDM2	99	65.302	Ursus_americanus
ENSAOCG00000023694	r3hdm2	91	66.600	ENSUMAG00000019179	R3HDM2	96	65.393	Ursus_maritimus
ENSAOCG00000023694	r3hdm2	90	81.788	ENSVPAG00000008656	R3HDM2	89	81.271	Vicugna_pacos
ENSAOCG00000023694	r3hdm2	93	67.818	ENSVVUG00000018014	R3HDM2	95	65.569	Vulpes_vulpes
ENSAOCG00000023694	r3hdm2	99	62.212	ENSXETG00000017153	r3hdm2	99	60.770	Xenopus_tropicalis
ENSAOCG00000023694	r3hdm2	87	88.009	ENSXCOG00000013882	r3hdm2	100	85.730	Xiphophorus_couchianus
ENSAOCG00000023694	r3hdm2	100	92.606	ENSXMAG00000017978	r3hdm2	100	91.697	Xiphophorus_maculatus