EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000023705 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: DNA-directed RNA polymerase III subunit RPC7-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 1791 bases
Position: chrNXFZ01001900.1:78476-80266
Accession: 111588012
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000031792	RNA_pol_3_Rpc31	PF11705.8	7e-24	1	1
ENSAOCP00000018487	RNA_pol_3_Rpc31	PF11705.8	4.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000033160	-	657	XM_023298112	ENSAOCP00000031792	218 (aa)	XP_023153880	-
ENSAOCT00000028073	-	597	-	ENSAOCP00000018487	198 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000023705's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000023705's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000023705	-	100	40.179	ENSAOCG00000024467	-	100	39.286

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000023705	-	100	84.400	ENSAPOG00000021349	-	100	84.400	Acanthochromis_polyacanthus
ENSAOCG00000023705	-	100	74.678	ENSAPEG00000012672	-	100	74.892	Amphiprion_percula
ENSAOCG00000023705	-	53	73.077	ENSACLG00000016072	-	100	57.576	Astatotilapia_calliptera
ENSAOCG00000023705	-	100	54.783	ENSHBUG00000009915	-	100	52.212	Haplochromis_burtoni
ENSAOCG00000023705	-	56	80.000	ENSLBEG00000020028	-	98	61.039	Labrus_bergylta
ENSAOCG00000023705	-	100	57.848	ENSMAMG00000017037	-	100	60.684	Mastacembelus_armatus
ENSAOCG00000023705	-	100	54.783	ENSMZEG00005010079	-	100	52.212	Maylandia_zebra
ENSAOCG00000023705	-	53	74.038	ENSNBRG00000008808	-	96	55.189	Neolamprologus_brichardi
ENSAOCG00000023705	-	100	57.826	ENSONIG00000001460	-	98	57.466	Oreochromis_niloticus
ENSAOCG00000023705	-	94	55.208	ENSORLG00000020581	-	100	54.545	Oryzias_latipes
ENSAOCG00000023705	-	93	57.674	ENSPFOG00000014955	-	100	57.143	Poecilia_formosa
ENSAOCG00000023705	-	54	76.415	ENSPLAG00000018896	-	100	59.296	Poecilia_latipinna
ENSAOCG00000023705	-	54	75.472	ENSPMEG00000000239	-	100	57.143	Poecilia_mexicana
ENSAOCG00000023705	-	58	96.296	ENSPREG00000015562	-	100	51.174	Poecilia_reticulata
ENSAOCG00000023705	-	62	81.148	ENSSDUG00000014360	-	100	60.987	Seriola_dumerili
ENSAOCG00000023705	-	51	69.307	ENSSLDG00000022819	-	85	69.307	Seriola_lalandi_dorsalis
ENSAOCG00000023705	-	62	94.262	ENSSPAG00000010477	-	99	68.778	Stegastes_partitus
ENSAOCG00000023705	-	100	55.392	ENSTNIG00000002936	-	99	57.080	Tetraodon_nigroviridis