EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000023784 (Gene tree)
Gene ID: 111575558
Gene Symbol: chd3
Alias: -
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 47462 bases
Position: chrNXFZ01003059.1:25133-72594
Accession: 111575558
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000018535	ResIII	PF04851.15	1.1e-07	1	1
ENSAOCP00000018576	ResIII	PF04851.15	6e-07	1	1
ENSAOCP00000018563	ResIII	PF04851.15	6.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000028155	-	8222	XM_023280762	ENSAOCP00000018563	2119 (aa)	XP_023136530	UPI000C30B3D3
ENSAOCT00000033177	-	4830	-	ENSAOCP00000018535	1609 (aa)	-	-
ENSAOCT00000028184	-	9074	XM_023280765	ENSAOCP00000018576	2064 (aa)	XP_023136533	UPI000C30503B

Gene Model

Click here to download ENSAOCG00000023784's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000023784's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000023784	chd3	96	78.723	ENSAOCG00000020356	chd5	96	67.032
ENSAOCG00000023784	chd3	95	80.000	ENSAOCG00000000507	-	97	67.192
ENSAOCG00000023784	chd3	87	83.750	ENSAOCG00000016412	-	78	83.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000023784	chd3	97	81.675	ENSG00000170004	CHD3	91	81.100	Homo_sapiens
ENSAOCG00000023784	chd3	99	95.514	ENSAPOG00000005614	chd3	94	98.947	Acanthochromis_polyacanthus
ENSAOCG00000023784	chd3	69	87.473	ENSAMEG00000003025	-	81	87.473	Ailuropoda_melanoleuca
ENSAOCG00000023784	chd3	99	94.773	ENSACIG00000019671	chd3	99	96.757	Amphilophus_citrinellus
ENSAOCG00000023784	chd3	100	99.528	ENSAPEG00000006341	chd3	100	99.528	Amphiprion_percula
ENSAOCG00000023784	chd3	100	92.956	ENSATEG00000000848	chd3	100	93.095	Anabas_testudineus
ENSAOCG00000023784	chd3	98	82.653	ENSACAG00000004276	CHD3	77	83.249	Anolis_carolinensis
ENSAOCG00000023784	chd3	97	81.250	ENSANAG00000034323	CHD3	89	81.100	Aotus_nancymaae
ENSAOCG00000023784	chd3	99	91.101	ENSACLG00000009222	chd3	99	93.030	Astatotilapia_calliptera
ENSAOCG00000023784	chd3	97	81.910	ENSBTAG00000014377	CHD3	80	81.335	Bos_taurus
ENSAOCG00000023784	chd3	97	81.603	ENSCJAG00000014766	CHD3	91	81.100	Callithrix_jacchus
ENSAOCG00000023784	chd3	97	81.603	ENSCAFG00000016859	CHD3	81	81.053	Canis_familiaris
ENSAOCG00000023784	chd3	97	81.603	ENSCAFG00020007422	CHD3	96	79.646	Canis_lupus_dingo
ENSAOCG00000023784	chd3	97	81.747	ENSCHIG00000016737	CHD3	80	81.250	Capra_hircus
ENSAOCG00000023784	chd3	96	87.791	ENSTSYG00000035658	CHD3	91	79.863	Carlito_syrichta
ENSAOCG00000023784	chd3	97	81.152	ENSCAPG00000014864	CHD3	89	79.070	Cavia_aperea
ENSAOCG00000023784	chd3	97	81.317	ENSCPOG00000022653	CHD3	79	81.152	Cavia_porcellus
ENSAOCG00000023784	chd3	97	81.675	ENSCCAG00000034792	CHD3	88	81.100	Cebus_capucinus
ENSAOCG00000023784	chd3	97	81.603	ENSCATG00000041717	CHD3	91	81.100	Cercocebus_atys
ENSAOCG00000023784	chd3	97	81.675	ENSCLAG00000010523	CHD3	92	80.756	Chinchilla_lanigera
ENSAOCG00000023784	chd3	97	81.766	ENSCSAG00000011122	CHD3	80	81.250	Chlorocebus_sabaeus
ENSAOCG00000023784	chd3	99	80.400	ENSCPBG00000011966	CHD3	99	80.133	Chrysemys_picta_bellii
ENSAOCG00000023784	chd3	97	81.603	ENSCANG00000037641	CHD3	91	81.100	Colobus_angolensis_palliatus
ENSAOCG00000023784	chd3	97	81.771	ENSCGRG00001011306	Chd3	92	80.546	Cricetulus_griseus_chok1gshd
ENSAOCG00000023784	chd3	92	73.963	ENSCGRG00000007878	Chd3	93	76.858	Cricetulus_griseus_crigri
ENSAOCG00000023784	chd3	99	87.750	ENSCSEG00000004489	chd3	100	91.336	Cynoglossus_semilaevis
ENSAOCG00000023784	chd3	99	88.630	ENSCVAG00000007293	chd3	95	94.286	Cyprinodon_variegatus
ENSAOCG00000023784	chd3	99	86.121	ENSDARG00000021405	chd3	97	90.127	Danio_rerio
ENSAOCG00000023784	chd3	85	88.752	ENSDNOG00000047846	CHD3	71	88.752	Dasypus_novemcinctus
ENSAOCG00000023784	chd3	98	81.250	ENSDORG00000010713	Chd3	92	80.756	Dipodomys_ordii
ENSAOCG00000023784	chd3	96	86.628	ENSETEG00000017733	CHD3	93	77.741	Echinops_telfairi
ENSAOCG00000023784	chd3	76	86.709	ENSEBUG00000008310	chd3	81	86.709	Eptatretus_burgeri
ENSAOCG00000023784	chd3	97	81.747	ENSEASG00005019360	CHD3	86	81.031	Equus_asinus_asinus
ENSAOCG00000023784	chd3	97	81.747	ENSECAG00000010051	CHD3	86	81.031	Equus_caballus
ENSAOCG00000023784	chd3	92	75.519	ENSEEUG00000015205	CHD3	76	82.883	Erinaceus_europaeus
ENSAOCG00000023784	chd3	99	82.001	ENSELUG00000019499	chd3	99	97.279	Esox_lucius
ENSAOCG00000023784	chd3	97	81.747	ENSFCAG00000009629	CHD3	77	81.389	Felis_catus
ENSAOCG00000023784	chd3	97	81.375	ENSFDAG00000008220	CHD3	80	81.250	Fukomys_damarensis
ENSAOCG00000023784	chd3	97	91.099	ENSGMOG00000013599	chd3	91	87.374	Gadus_morhua
ENSAOCG00000023784	chd3	66	88.679	ENSGAFG00000004055	chd3	99	89.983	Gambusia_affinis
ENSAOCG00000023784	chd3	97	92.553	ENSGACG00000019275	chd3	99	82.669	Gasterosteus_aculeatus
ENSAOCG00000023784	chd3	86	78.700	ENSGAGG00000013164	CHD3	99	76.766	Gopherus_agassizii
ENSAOCG00000023784	chd3	97	81.603	ENSGGOG00000013496	CHD3	91	81.100	Gorilla_gorilla
ENSAOCG00000023784	chd3	97	81.389	ENSHGLG00000012017	CHD3	88	81.100	Heterocephalus_glaber_female
ENSAOCG00000023784	chd3	81	86.585	ENSHGLG00100013902	CHD3	93	85.000	Heterocephalus_glaber_male
ENSAOCG00000023784	chd3	97	91.579	ENSHCOG00000010170	chd3	99	86.348	Hippocampus_comes
ENSAOCG00000023784	chd3	99	84.978	ENSIPUG00000003271	chd3	93	86.790	Ictalurus_punctatus
ENSAOCG00000023784	chd3	97	81.771	ENSSTOG00000025907	CHD3	92	80.756	Ictidomys_tridecemlineatus
ENSAOCG00000023784	chd3	97	81.675	ENSJJAG00000017633	Chd3	92	81.100	Jaculus_jaculus
ENSAOCG00000023784	chd3	99	89.644	ENSKMAG00000019292	chd3	96	98.500	Kryptolebias_marmoratus
ENSAOCG00000023784	chd3	99	86.728	ENSLBEG00000028485	chd3	93	95.935	Labrus_bergylta
ENSAOCG00000023784	chd3	99	77.333	ENSLACG00000008031	CHD3	94	77.815	Latimeria_chalumnae
ENSAOCG00000023784	chd3	99	86.354	ENSLOCG00000013965	chd3	80	86.498	Lepisosteus_oculatus
ENSAOCG00000023784	chd3	99	80.000	ENSLAFG00000000572	CHD3	79	85.368	Loxodonta_africana
ENSAOCG00000023784	chd3	97	81.603	ENSMFAG00000020113	CHD3	91	81.100	Macaca_fascicularis
ENSAOCG00000023784	chd3	97	81.250	ENSMMUG00000022221	CHD3	89	79.402	Macaca_mulatta
ENSAOCG00000023784	chd3	97	81.603	ENSMNEG00000001728	CHD3	91	81.100	Macaca_nemestrina
ENSAOCG00000023784	chd3	97	81.603	ENSMLEG00000032249	CHD3	91	81.100	Mandrillus_leucophaeus
ENSAOCG00000023784	chd3	99	92.617	ENSMAMG00000000564	chd3	99	92.617	Mastacembelus_armatus
ENSAOCG00000023784	chd3	97	81.771	ENSMAUG00000013873	Chd3	89	80.546	Mesocricetus_auratus
ENSAOCG00000023784	chd3	97	81.603	ENSMICG00000008741	CHD3	88	80.069	Microcebus_murinus
ENSAOCG00000023784	chd3	97	81.771	ENSMOCG00000004848	Chd3	93	80.205	Microtus_ochrogaster
ENSAOCG00000023784	chd3	96	97.191	ENSMMOG00000012699	chd3	99	90.426	Mola_mola
ENSAOCG00000023784	chd3	99	78.193	ENSMODG00000007509	CHD3	96	80.211	Monodelphis_domestica
ENSAOCG00000023784	chd3	99	77.651	MGP_CAROLIEiJ_G0016564	Chd3	95	80.546	Mus_caroli
ENSAOCG00000023784	chd3	97	80.901	ENSMUSG00000018474	Chd3	95	80.546	Mus_musculus
ENSAOCG00000023784	chd3	97	81.317	MGP_PahariEiJ_G0017695	Chd3	95	80.546	Mus_pahari
ENSAOCG00000023784	chd3	97	80.973	MGP_SPRETEiJ_G0017400	Chd3	95	80.546	Mus_spretus
ENSAOCG00000023784	chd3	90	83.006	ENSMPUG00000008861	CHD3	85	82.585	Mustela_putorius_furo
ENSAOCG00000023784	chd3	96	82.967	ENSMLUG00000014643	-	78	82.967	Myotis_lucifugus
ENSAOCG00000023784	chd3	97	81.771	ENSNGAG00000000773	Chd3	78	81.771	Nannospalax_galili
ENSAOCG00000023784	chd3	99	89.242	ENSNBRG00000000636	chd3	98	90.013	Neolamprologus_brichardi
ENSAOCG00000023784	chd3	94	89.189	ENSNLEG00000009770	CHD3	91	83.071	Nomascus_leucogenys
ENSAOCG00000023784	chd3	86	87.791	ENSMEUG00000005852	CHD3	84	80.405	Notamacropus_eugenii
ENSAOCG00000023784	chd3	97	81.122	ENSOPRG00000011069	CHD3	85	81.122	Ochotona_princeps
ENSAOCG00000023784	chd3	97	81.675	ENSODEG00000017785	CHD3	79	80.744	Octodon_degus
ENSAOCG00000023784	chd3	98	95.481	ENSONIG00000009292	chd3	99	90.418	Oreochromis_niloticus
ENSAOCG00000023784	chd3	95	80.200	ENSOCUG00000029299	CHD3	79	79.214	Oryctolagus_cuniculus
ENSAOCG00000023784	chd3	90	86.177	ENSORLG00000007107	chd3	91	89.449	Oryzias_latipes
ENSAOCG00000023784	chd3	63	88.944	ENSORLG00020008387	chd3	95	88.889	Oryzias_latipes_hni
ENSAOCG00000023784	chd3	99	90.103	ENSOMEG00000013691	chd3	99	90.223	Oryzias_melastigma
ENSAOCG00000023784	chd3	97	81.675	ENSOGAG00000003216	CHD3	80	80.888	Otolemur_garnettii
ENSAOCG00000023784	chd3	97	81.495	ENSOARG00000017855	CHD3	78	80.697	Ovis_aries
ENSAOCG00000023784	chd3	97	81.250	ENSPPAG00000032886	CHD3	91	79.125	Pan_paniscus
ENSAOCG00000023784	chd3	97	81.747	ENSPPRG00000000626	CHD3	91	80.412	Panthera_pardus
ENSAOCG00000023784	chd3	97	81.675	ENSPTRG00000008714	CHD3	91	81.100	Pan_troglodytes
ENSAOCG00000023784	chd3	97	81.603	ENSPANG00000023938	CHD3	88	81.100	Papio_anubis
ENSAOCG00000023784	chd3	97	91.710	ENSPKIG00000006305	chd3	95	90.031	Paramormyrops_kingsleyae
ENSAOCG00000023784	chd3	67	82.509	ENSPSIG00000010177	CHD3	97	82.505	Pelodiscus_sinensis
ENSAOCG00000023784	chd3	97	81.771	ENSPEMG00000014262	Chd3	80	81.771	Peromyscus_maniculatus_bairdii
ENSAOCG00000023784	chd3	94	90.541	ENSPCIG00000005442	CHD3	90	90.955	Phascolarctos_cinereus
ENSAOCG00000023784	chd3	100	92.088	ENSPFOG00000012464	chd3	100	91.386	Poecilia_formosa
ENSAOCG00000023784	chd3	99	86.062	ENSPLAG00000002887	chd3	97	93.976	Poecilia_latipinna
ENSAOCG00000023784	chd3	58	98.780	ENSPMEG00000016725	chd3	95	88.093	Poecilia_mexicana
ENSAOCG00000023784	chd3	99	92.351	ENSPREG00000011044	chd3	97	94.502	Poecilia_reticulata
ENSAOCG00000023784	chd3	97	80.729	ENSPPYG00000007940	CHD3	80	80.729	Pongo_abelii
ENSAOCG00000023784	chd3	92	87.241	ENSPCAG00000004350	CHD3	77	87.241	Procavia_capensis
ENSAOCG00000023784	chd3	97	81.603	ENSPCOG00000020952	CHD3	89	80.412	Propithecus_coquereli
ENSAOCG00000023784	chd3	81	85.915	ENSPVAG00000016344	CHD3	67	85.915	Pteropus_vampyrus
ENSAOCG00000023784	chd3	97	91.837	ENSPNAG00000020393	chd3	98	92.580	Pygocentrus_nattereri
ENSAOCG00000023784	chd3	97	80.830	ENSRNOG00000009722	Chd3	87	80.401	Rattus_norvegicus
ENSAOCG00000023784	chd3	97	81.250	ENSRBIG00000033562	CHD3	91	81.100	Rhinopithecus_bieti
ENSAOCG00000023784	chd3	97	81.250	ENSRROG00000029554	CHD3	91	81.100	Rhinopithecus_roxellana
ENSAOCG00000023784	chd3	97	81.675	ENSSBOG00000020719	CHD3	91	81.100	Saimiri_boliviensis_boliviensis
ENSAOCG00000023784	chd3	99	78.065	ENSSHAG00000014412	CHD3	93	80.479	Sarcophilus_harrisii
ENSAOCG00000023784	chd3	94	84.022	ENSSFOG00015023123	chd3	92	88.215	Scleropages_formosus
ENSAOCG00000023784	chd3	97	96.842	ENSSMAG00000006451	chd3	100	92.792	Scophthalmus_maximus
ENSAOCG00000023784	chd3	61	92.049	ENSSDUG00000005792	chd3	96	90.826	Seriola_dumerili
ENSAOCG00000023784	chd3	99	97.538	ENSSPAG00000013694	chd3	99	98.936	Stegastes_partitus
ENSAOCG00000023784	chd3	97	81.910	ENSSSCG00000021363	CHD3	92	81.120	Sus_scrofa
ENSAOCG00000023784	chd3	88	89.028	ENSTRUG00000014990	chd3	89	91.728	Takifugu_rubripes
ENSAOCG00000023784	chd3	99	87.500	ENSTNIG00000012998	chd3	99	91.176	Tetraodon_nigroviridis
ENSAOCG00000023784	chd3	74	87.981	ENSTBEG00000011454	-	68	87.981	Tupaia_belangeri
ENSAOCG00000023784	chd3	95	84.460	ENSTTRG00000010295	CHD3	77	84.460	Tursiops_truncatus
ENSAOCG00000023784	chd3	97	81.053	ENSUAMG00000005475	CHD3	95	83.830	Ursus_americanus
ENSAOCG00000023784	chd3	56	90.093	ENSVPAG00000010794	-	59	96.078	Vicugna_pacos
ENSAOCG00000023784	chd3	97	81.603	ENSVVUG00000028011	CHD3	86	84.016	Vulpes_vulpes
ENSAOCG00000023784	chd3	98	83.163	ENSXETG00000012991	chd3	78	83.163	Xenopus_tropicalis
ENSAOCG00000023784	chd3	60	93.333	ENSXCOG00000000809	chd3	97	92.188	Xiphophorus_couchianus
ENSAOCG00000023784	chd3	98	91.241	ENSXMAG00000016035	chd3	99	94.565	Xiphophorus_maculatus