EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000023968 (Gene tree)
Gene ID: 111576159
Gene Symbol: tnrc6c1
Alias: fj17e06|si:dkey-54k13.1|unm_sa1472|wu:fj17e06
Full Name: trinucleotide repeat-containing gene 6C protein-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 17893 bases
Position: chrNXFZ01003129.1:308800-326692
Accession: 111576159
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000018740	Ago_hook	PF10427.9	1.8e-08	1	1
ENSAOCP00000018740	RRM_1	PF00076.22	0.00017	1	1
ENSAOCP00000018750	RRM_1	PF00076.22	0.00019	1	1
ENSAOCP00000031952	RRM_1	PF00076.22	0.00019	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000033267	-	5224	XM_023281712	ENSAOCP00000018750	1700 (aa)	XP_023137480	-
ENSAOCT00000028401	-	5335	XM_023281710	ENSAOCP00000031952	1737 (aa)	XP_023137478	UPI000C30EC11
ENSAOCT00000033268	-	4860	-	ENSAOCP00000018740	1619 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000023968's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000023968's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000023968	tnrc6c1	99	80.769	ENSAOCG00000017648	tnrc6c2	91	76.744

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000023968	tnrc6c1	99	49.105	ENSG00000078687	TNRC6C	100	56.897	Homo_sapiens
ENSAOCG00000023968	tnrc6c1	100	98.176	ENSAPOG00000019749	tnrc6c1	100	98.176	Acanthochromis_polyacanthus
ENSAOCG00000023968	tnrc6c1	99	48.301	ENSAMEG00000013756	TNRC6C	75	64.072	Ailuropoda_melanoleuca
ENSAOCG00000023968	tnrc6c1	100	79.093	ENSACIG00000008075	tnrc6c1	99	78.697	Amphilophus_citrinellus
ENSAOCG00000023968	tnrc6c1	100	99.770	ENSAPEG00000009020	tnrc6c1	100	99.770	Amphiprion_percula
ENSAOCG00000023968	tnrc6c1	95	66.020	ENSAPLG00000005456	TNRC6C	71	64.618	Anas_platyrhynchos
ENSAOCG00000023968	tnrc6c1	99	50.826	ENSACAG00000016198	TNRC6C	69	66.012	Anolis_carolinensis
ENSAOCG00000023968	tnrc6c1	99	49.055	ENSANAG00000021554	TNRC6C	77	68.800	Aotus_nancymaae
ENSAOCG00000023968	tnrc6c1	99	79.539	ENSACLG00000000424	tnrc6c1	98	84.615	Astatotilapia_calliptera
ENSAOCG00000023968	tnrc6c1	99	44.180	ENSBTAG00000018658	TNRC6C	85	67.412	Bos_taurus
ENSAOCG00000023968	tnrc6c1	99	48.901	ENSCJAG00000019431	TNRC6C	77	68.640	Callithrix_jacchus
ENSAOCG00000023968	tnrc6c1	95	58.787	ENSCAFG00000005224	TNRC6C	74	63.664	Canis_familiaris
ENSAOCG00000023968	tnrc6c1	99	47.692	ENSCAFG00020006661	TNRC6C	78	67.305	Canis_lupus_dingo
ENSAOCG00000023968	tnrc6c1	91	72.279	ENSCHIG00000026004	TNRC6C	85	67.840	Capra_hircus
ENSAOCG00000023968	tnrc6c1	92	51.283	ENSTSYG00000005403	TNRC6C	78	64.910	Carlito_syrichta
ENSAOCG00000023968	tnrc6c1	99	45.895	ENSCAPG00000007307	TNRC6C	84	62.880	Cavia_aperea
ENSAOCG00000023968	tnrc6c1	99	49.022	ENSCPOG00000000467	TNRC6C	91	68.000	Cavia_porcellus
ENSAOCG00000023968	tnrc6c1	99	50.052	ENSCCAG00000030524	TNRC6C	77	68.960	Cebus_capucinus
ENSAOCG00000023968	tnrc6c1	99	49.104	ENSCATG00000033135	TNRC6C	77	68.960	Cercocebus_atys
ENSAOCG00000023968	tnrc6c1	99	50.026	ENSCLAG00000011139	TNRC6C	71	63.676	Chinchilla_lanigera
ENSAOCG00000023968	tnrc6c1	99	49.280	ENSCSAG00000005167	TNRC6C	69	64.653	Chlorocebus_sabaeus
ENSAOCG00000023968	tnrc6c1	59	68.384	ENSCHOG00000000088	TNRC6C	51	62.009	Choloepus_hoffmanni
ENSAOCG00000023968	tnrc6c1	100	50.366	ENSCPBG00000027960	TNRC6C	78	68.900	Chrysemys_picta_bellii
ENSAOCG00000023968	tnrc6c1	99	49.155	ENSCANG00000041771	TNRC6C	77	69.120	Colobus_angolensis_palliatus
ENSAOCG00000023968	tnrc6c1	99	48.819	ENSCGRG00001022686	Tnrc6c	75	66.935	Cricetulus_griseus_chok1gshd
ENSAOCG00000023968	tnrc6c1	99	49.051	ENSCGRG00000018041	Tnrc6c	75	66.935	Cricetulus_griseus_crigri
ENSAOCG00000023968	tnrc6c1	99	82.647	ENSCSEG00000012744	tnrc6c1	95	82.588	Cynoglossus_semilaevis
ENSAOCG00000023968	tnrc6c1	93	75.709	ENSDARG00000076847	tnrc6c1	99	61.818	Danio_rerio
ENSAOCG00000023968	tnrc6c1	99	49.557	ENSDNOG00000003247	TNRC6C	70	67.200	Dasypus_novemcinctus
ENSAOCG00000023968	tnrc6c1	99	46.324	ENSDORG00000004558	Tnrc6c	75	67.099	Dipodomys_ordii
ENSAOCG00000023968	tnrc6c1	87	66.497	ENSETEG00000005527	TNRC6C	77	63.754	Echinops_telfairi
ENSAOCG00000023968	tnrc6c1	92	50.828	ENSEASG00005004799	TNRC6C	78	67.357	Equus_asinus_asinus
ENSAOCG00000023968	tnrc6c1	99	71.574	ENSECAG00000012486	TNRC6C	70	67.357	Equus_caballus
ENSAOCG00000023968	tnrc6c1	93	56.381	ENSEEUG00000010008	TNRC6C	74	60.828	Erinaceus_europaeus
ENSAOCG00000023968	tnrc6c1	99	45.285	ENSFCAG00000028358	TNRC6C	78	66.826	Felis_catus
ENSAOCG00000023968	tnrc6c1	92	50.900	ENSFALG00000000848	TNRC6C	79	65.762	Ficedula_albicollis
ENSAOCG00000023968	tnrc6c1	97	49.784	ENSFDAG00000010368	TNRC6C	75	68.640	Fukomys_damarensis
ENSAOCG00000023968	tnrc6c1	100	85.796	ENSFHEG00000002936	tnrc6c1	100	85.279	Fundulus_heteroclitus
ENSAOCG00000023968	tnrc6c1	100	50.462	ENSGALG00000001725	TNRC6C	78	69.071	Gallus_gallus
ENSAOCG00000023968	tnrc6c1	100	85.630	ENSGAFG00000019019	tnrc6c1	100	84.922	Gambusia_affinis
ENSAOCG00000023968	tnrc6c1	99	78.506	ENSGACG00000012320	tnrc6c1	92	76.481	Gasterosteus_aculeatus
ENSAOCG00000023968	tnrc6c1	100	51.822	ENSGAGG00000022043	TNRC6C	74	68.581	Gopherus_agassizii
ENSAOCG00000023968	tnrc6c1	99	49.077	ENSGGOG00000011304	TNRC6C	77	70.240	Gorilla_gorilla
ENSAOCG00000023968	tnrc6c1	100	86.987	ENSHBUG00000010846	tnrc6c1	100	86.569	Haplochromis_burtoni
ENSAOCG00000023968	tnrc6c1	99	49.392	ENSHGLG00000004809	TNRC6C	69	68.640	Heterocephalus_glaber_female
ENSAOCG00000023968	tnrc6c1	99	48.948	ENSHGLG00100012597	TNRC6C	67	68.871	Heterocephalus_glaber_male
ENSAOCG00000023968	tnrc6c1	99	63.384	ENSIPUG00000000818	tnrc6c1	93	76.369	Ictalurus_punctatus
ENSAOCG00000023968	tnrc6c1	99	49.106	ENSSTOG00000009101	TNRC6C	77	64.255	Ictidomys_tridecemlineatus
ENSAOCG00000023968	tnrc6c1	99	48.816	ENSJJAG00000017055	Tnrc6c	67	69.579	Jaculus_jaculus
ENSAOCG00000023968	tnrc6c1	98	81.856	ENSKMAG00000021023	tnrc6c1	100	79.104	Kryptolebias_marmoratus
ENSAOCG00000023968	tnrc6c1	90	62.827	ENSLACG00000015283	TNRC6C	73	63.212	Latimeria_chalumnae
ENSAOCG00000023968	tnrc6c1	99	80.640	ENSLOCG00000013377	tnrc6c1	91	79.677	Lepisosteus_oculatus
ENSAOCG00000023968	tnrc6c1	99	49.473	ENSLAFG00000011122	TNRC6C	68	68.000	Loxodonta_africana
ENSAOCG00000023968	tnrc6c1	99	49.104	ENSMFAG00000043943	TNRC6C	77	68.960	Macaca_fascicularis
ENSAOCG00000023968	tnrc6c1	99	49.383	ENSMMUG00000011924	TNRC6C	77	68.960	Macaca_mulatta
ENSAOCG00000023968	tnrc6c1	99	49.053	ENSMNEG00000030405	TNRC6C	77	68.960	Macaca_nemestrina
ENSAOCG00000023968	tnrc6c1	99	49.104	ENSMLEG00000033436	TNRC6C	77	68.960	Mandrillus_leucophaeus
ENSAOCG00000023968	tnrc6c1	100	89.130	ENSMAMG00000023613	tnrc6c1	100	88.249	Mastacembelus_armatus
ENSAOCG00000023968	tnrc6c1	100	87.084	ENSMZEG00005010920	tnrc6c1	100	86.510	Maylandia_zebra
ENSAOCG00000023968	tnrc6c1	93	67.143	ENSMGAG00000003906	TNRC6C	62	65.476	Meleagris_gallopavo
ENSAOCG00000023968	tnrc6c1	92	50.452	ENSMAUG00000021618	Tnrc6c	75	68.710	Mesocricetus_auratus
ENSAOCG00000023968	tnrc6c1	99	49.101	ENSMICG00000003952	TNRC6C	80	64.502	Microcebus_murinus
ENSAOCG00000023968	tnrc6c1	99	48.477	ENSMOCG00000015879	Tnrc6c	75	68.599	Microtus_ochrogaster
ENSAOCG00000023968	tnrc6c1	94	85.767	ENSMMOG00000005203	tnrc6c1	100	84.839	Mola_mola
ENSAOCG00000023968	tnrc6c1	100	49.142	ENSMODG00000001785	TNRC6C	67	69.280	Monodelphis_domestica
ENSAOCG00000023968	tnrc6c1	99	48.633	MGP_CAROLIEiJ_G0017465	Tnrc6c	75	68.871	Mus_caroli
ENSAOCG00000023968	tnrc6c1	99	48.531	ENSMUSG00000025571	Tnrc6c	75	68.871	Mus_musculus
ENSAOCG00000023968	tnrc6c1	99	48.633	MGP_PahariEiJ_G0018593	Tnrc6c	75	68.871	Mus_pahari
ENSAOCG00000023968	tnrc6c1	99	48.374	MGP_SPRETEiJ_G0018309	Tnrc6c	75	68.387	Mus_spretus
ENSAOCG00000023968	tnrc6c1	99	48.760	ENSMPUG00000013348	TNRC6C	69	64.458	Mustela_putorius_furo
ENSAOCG00000023968	tnrc6c1	99	66.880	ENSMLUG00000014431	TNRC6C	71	59.422	Myotis_lucifugus
ENSAOCG00000023968	tnrc6c1	99	48.951	ENSNGAG00000012203	Tnrc6c	67	68.065	Nannospalax_galili
ENSAOCG00000023968	tnrc6c1	100	86.804	ENSNBRG00000005344	tnrc6c1	100	86.921	Neolamprologus_brichardi
ENSAOCG00000023968	tnrc6c1	99	47.663	ENSNLEG00000000047	TNRC6C	68	61.329	Nomascus_leucogenys
ENSAOCG00000023968	tnrc6c1	91	71.253	ENSMEUG00000005104	TNRC6C	71	67.532	Notamacropus_eugenii
ENSAOCG00000023968	tnrc6c1	94	50.304	ENSODEG00000012499	TNRC6C	87	63.531	Octodon_degus
ENSAOCG00000023968	tnrc6c1	94	87.656	ENSONIG00000002210	tnrc6c1	100	87.344	Oreochromis_niloticus
ENSAOCG00000023968	tnrc6c1	71	67.007	ENSOANG00000009758	-	63	64.070	Ornithorhynchus_anatinus
ENSAOCG00000023968	tnrc6c1	100	80.175	ENSORLG00000009837	tnrc6c1	100	85.818	Oryzias_latipes
ENSAOCG00000023968	tnrc6c1	100	80.080	ENSORLG00020016510	tnrc6c1	100	80.877	Oryzias_latipes_hni
ENSAOCG00000023968	tnrc6c1	80	78.006	ENSORLG00015000171	tnrc6c1	99	78.219	Oryzias_latipes_hsok
ENSAOCG00000023968	tnrc6c1	100	82.770	ENSOMEG00000000357	tnrc6c1	100	81.416	Oryzias_melastigma
ENSAOCG00000023968	tnrc6c1	94	48.831	ENSOGAG00000007197	TNRC6C	78	65.145	Otolemur_garnettii
ENSAOCG00000023968	tnrc6c1	95	47.643	ENSOARG00000006041	TNRC6C	87	53.250	Ovis_aries
ENSAOCG00000023968	tnrc6c1	99	49.027	ENSPPAG00000027160	TNRC6C	77	69.120	Pan_paniscus
ENSAOCG00000023968	tnrc6c1	99	45.337	ENSPPRG00000018881	TNRC6C	80	62.193	Panthera_pardus
ENSAOCG00000023968	tnrc6c1	85	56.639	ENSPTIG00000008791	TNRC6C	68	52.948	Panthera_tigris_altaica
ENSAOCG00000023968	tnrc6c1	99	49.078	ENSPTRG00000009699	TNRC6C	77	69.280	Pan_troglodytes
ENSAOCG00000023968	tnrc6c1	99	49.104	ENSPANG00000019994	TNRC6C	77	68.960	Papio_anubis
ENSAOCG00000023968	tnrc6c1	94	68.779	ENSPKIG00000005428	tnrc6c1	95	69.136	Paramormyrops_kingsleyae
ENSAOCG00000023968	tnrc6c1	97	50.402	ENSPSIG00000018069	TNRC6C	75	68.960	Pelodiscus_sinensis
ENSAOCG00000023968	tnrc6c1	93	74.775	ENSPMGG00000022911	tnrc6c1	98	79.757	Periophthalmus_magnuspinnatus
ENSAOCG00000023968	tnrc6c1	99	49.345	ENSPEMG00000009785	Tnrc6c	75	61.935	Peromyscus_maniculatus_bairdii
ENSAOCG00000023968	tnrc6c1	52	40.361	ENSPCIG00000017421	-	65	43.536	Phascolarctos_cinereus
ENSAOCG00000023968	tnrc6c1	99	86.141	ENSPFOG00000012560	tnrc6c1	99	80.352	Poecilia_formosa
ENSAOCG00000023968	tnrc6c1	94	86.185	ENSPLAG00000021055	tnrc6c1	100	86.123	Poecilia_latipinna
ENSAOCG00000023968	tnrc6c1	99	49.305	ENSPPYG00000008679	TNRC6C	68	64.955	Pongo_abelii
ENSAOCG00000023968	tnrc6c1	66	89.474	ENSPCAG00000012510	TNRC6C	81	66.590	Procavia_capensis
ENSAOCG00000023968	tnrc6c1	94	50.332	ENSPCOG00000021451	TNRC6C	77	70.000	Propithecus_coquereli
ENSAOCG00000023968	tnrc6c1	70	62.308	ENSPVAG00000002008	TNRC6C	70	68.029	Pteropus_vampyrus
ENSAOCG00000023968	tnrc6c1	100	87.141	ENSPNYG00000014477	tnrc6c1	100	86.567	Pundamilia_nyererei
ENSAOCG00000023968	tnrc6c1	92	50.199	ENSRNOG00000022395	Tnrc6c	77	68.871	Rattus_norvegicus
ENSAOCG00000023968	tnrc6c1	99	49.155	ENSRBIG00000027777	TNRC6C	77	69.120	Rhinopithecus_bieti
ENSAOCG00000023968	tnrc6c1	99	49.155	ENSRROG00000042912	TNRC6C	77	69.120	Rhinopithecus_roxellana
ENSAOCG00000023968	tnrc6c1	99	48.954	ENSSBOG00000023981	TNRC6C	78	64.804	Saimiri_boliviensis_boliviensis
ENSAOCG00000023968	tnrc6c1	51	64.921	ENSSHAG00000018330	-	100	64.570	Sarcophilus_harrisii
ENSAOCG00000023968	tnrc6c1	99	80.000	ENSSFOG00015006475	tnrc6c1	92	77.325	Scleropages_formosus
ENSAOCG00000023968	tnrc6c1	84	62.743	ENSSFOG00015004735	-	99	70.027	Scleropages_formosus
ENSAOCG00000023968	tnrc6c1	100	87.507	ENSSMAG00000012761	tnrc6c1	100	87.219	Scophthalmus_maximus
ENSAOCG00000023968	tnrc6c1	99	91.145	ENSSDUG00000002366	tnrc6c1	98	90.260	Seriola_dumerili
ENSAOCG00000023968	tnrc6c1	94	91.323	ENSSLDG00000025613	tnrc6c1	100	90.574	Seriola_lalandi_dorsalis
ENSAOCG00000023968	tnrc6c1	63	91.781	ENSSARG00000006816	TNRC6C	83	69.091	Sorex_araneus
ENSAOCG00000023968	tnrc6c1	87	48.257	ENSSPUG00000007341	TNRC6C	83	64.804	Sphenodon_punctatus
ENSAOCG00000023968	tnrc6c1	98	94.051	ENSSPAG00000014977	tnrc6c1	98	93.772	Stegastes_partitus
ENSAOCG00000023968	tnrc6c1	91	50.326	ENSSSCG00000034373	TNRC6C	77	69.032	Sus_scrofa
ENSAOCG00000023968	tnrc6c1	97	50.454	ENSTGUG00000007733	TNRC6C	76	68.530	Taeniopygia_guttata
ENSAOCG00000023968	tnrc6c1	99	81.375	ENSTRUG00000011685	tnrc6c1	99	79.730	Takifugu_rubripes
ENSAOCG00000023968	tnrc6c1	99	76.204	ENSTNIG00000005273	tnrc6c1	100	79.227	Tetraodon_nigroviridis
ENSAOCG00000023968	tnrc6c1	64	63.033	ENSTBEG00000005046	TNRC6C	96	58.606	Tupaia_belangeri
ENSAOCG00000023968	tnrc6c1	97	49.946	ENSTTRG00000010828	TNRC6C	75	68.581	Tursiops_truncatus
ENSAOCG00000023968	tnrc6c1	99	47.911	ENSUMAG00000013614	TNRC6C	72	52.765	Ursus_maritimus
ENSAOCG00000023968	tnrc6c1	50	51.983	ENSVPAG00000006765	-	73	71.261	Vicugna_pacos
ENSAOCG00000023968	tnrc6c1	92	52.351	ENSVVUG00000015268	TNRC6C	78	68.102	Vulpes_vulpes
ENSAOCG00000023968	tnrc6c1	92	49.971	ENSXETG00000019470	tnrc6c	84	67.955	Xenopus_tropicalis
ENSAOCG00000023968	tnrc6c1	100	85.455	ENSXMAG00000025971	tnrc6c1	100	85.171	Xiphophorus_maculatus