EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000024104 (Gene tree)
Gene ID: 111569692
Gene Symbol: -
Alias: -
Full Name: RNA-binding motif%2C single-stranded-interacting protein 3
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 292093 bases
Position: chrNXFZ01002388.1:59488-351580
Accession: 111569692
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000018889	RRM_1	PF00076.22	2.9e-31	1	2
ENSAOCP00000018889	RRM_1	PF00076.22	2.9e-31	2	2
ENSAOCP00000018896	RRM_1	PF00076.22	4.4e-31	1	2
ENSAOCP00000018896	RRM_1	PF00076.22	4.4e-31	2	2
ENSAOCP00000018902	RRM_1	PF00076.22	4.9e-31	1	2
ENSAOCP00000018902	RRM_1	PF00076.22	4.9e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000028573	-	1823	-	ENSAOCP00000018896	506 (aa)	-	-
ENSAOCT00000033327	-	1296	XM_023271969	ENSAOCP00000018889	431 (aa)	XP_023127737	-
ENSAOCT00000028583	-	1874	XM_023271968	ENSAOCP00000018902	523 (aa)	XP_023127736	UPI000C303C9C

Gene Model

Click here to download ENSAOCG00000024104's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000024104's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000024104	-	99	76.180	ENSAOCG00000021274	rbms3	99	76.180
ENSAOCG00000024104	-	89	68.123	ENSAOCG00000008301	rbms2a	94	79.880
ENSAOCG00000024104	-	94	61.814	ENSAOCG00000014482	-	96	63.660
ENSAOCG00000024104	-	77	55.556	ENSAOCG00000010066	rbms1a	85	60.366
ENSAOCG00000024104	-	79	70.725	ENSAOCG00000024245	rbms2b	85	71.046

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000024104	-	99	82.916	ENSG00000144642	RBMS3	94	90.361	Homo_sapiens
ENSAOCG00000024104	-	100	98.662	ENSAPOG00000003432	-	100	98.662	Acanthochromis_polyacanthus
ENSAOCG00000024104	-	99	68.697	ENSAPOG00000007266	rbms3	93	75.495	Acanthochromis_polyacanthus
ENSAOCG00000024104	-	70	81.046	ENSAMEG00000005947	RBMS3	99	84.158	Ailuropoda_melanoleuca
ENSAOCG00000024104	-	88	67.532	ENSACIG00000021113	RBMS3	95	74.863	Amphilophus_citrinellus
ENSAOCG00000024104	-	69	95.050	ENSACIG00000006987	-	87	98.750	Amphilophus_citrinellus
ENSAOCG00000024104	-	82	76.280	ENSAPEG00000016299	rbms3	87	87.048	Amphiprion_percula
ENSAOCG00000024104	-	100	90.719	ENSAPEG00000009481	-	100	90.719	Amphiprion_percula
ENSAOCG00000024104	-	100	92.734	ENSATEG00000008433	-	98	96.577	Anabas_testudineus
ENSAOCG00000024104	-	99	76.524	ENSATEG00000024295	rbms3	99	76.975	Anabas_testudineus
ENSAOCG00000024104	-	99	82.420	ENSAPLG00000012270	RBMS3	99	81.735	Anas_platyrhynchos
ENSAOCG00000024104	-	99	82.192	ENSACAG00000028664	RBMS3	99	82.192	Anolis_carolinensis
ENSAOCG00000024104	-	99	82.916	ENSANAG00000021899	RBMS3	99	82.805	Aotus_nancymaae
ENSAOCG00000024104	-	100	94.129	ENSACLG00000008976	-	100	94.318	Astatotilapia_calliptera
ENSAOCG00000024104	-	99	75.792	ENSACLG00000018506	rbms3	95	84.140	Astatotilapia_calliptera
ENSAOCG00000024104	-	99	83.834	ENSAMXG00000020388	rbms3	99	83.834	Astyanax_mexicanus
ENSAOCG00000024104	-	57	87.705	ENSAMXG00000043770	-	95	87.705	Astyanax_mexicanus
ENSAOCG00000024104	-	99	83.371	ENSBTAG00000044062	RBMS3	99	83.258	Bos_taurus
ENSAOCG00000024104	-	99	82.916	ENSCJAG00000004312	RBMS3	99	82.805	Callithrix_jacchus
ENSAOCG00000024104	-	99	82.916	ENSCAFG00000005464	RBMS3	99	82.805	Canis_familiaris
ENSAOCG00000024104	-	99	82.916	ENSCAFG00020024980	RBMS3	99	82.805	Canis_lupus_dingo
ENSAOCG00000024104	-	99	82.916	ENSCHIG00000009144	RBMS3	99	82.805	Capra_hircus
ENSAOCG00000024104	-	77	82.143	ENSTSYG00000002615	RBMS3	99	85.758	Carlito_syrichta
ENSAOCG00000024104	-	88	81.316	ENSCAPG00000017783	RBMS3	95	82.842	Cavia_aperea
ENSAOCG00000024104	-	99	83.180	ENSCPOG00000006457	RBMS3	99	83.066	Cavia_porcellus
ENSAOCG00000024104	-	99	82.916	ENSCCAG00000008671	RBMS3	99	82.805	Cebus_capucinus
ENSAOCG00000024104	-	100	82.579	ENSCATG00000013222	RBMS3	99	82.472	Cercocebus_atys
ENSAOCG00000024104	-	99	82.460	ENSCLAG00000005866	RBMS3	99	82.353	Chinchilla_lanigera
ENSAOCG00000024104	-	66	78.201	ENSCSAG00000009655	RBMS3	99	87.778	Chlorocebus_sabaeus
ENSAOCG00000024104	-	87	88.000	ENSCHOG00000000758	RBMS3	86	88.000	Choloepus_hoffmanni
ENSAOCG00000024104	-	99	82.420	ENSCPBG00000022678	RBMS3	99	82.420	Chrysemys_picta_bellii
ENSAOCG00000024104	-	99	82.688	ENSCANG00000032137	RBMS3	99	82.579	Colobus_angolensis_palliatus
ENSAOCG00000024104	-	99	81.236	ENSCGRG00001007243	Rbms3	95	85.965	Cricetulus_griseus_chok1gshd
ENSAOCG00000024104	-	99	81.236	ENSCGRG00000004599	Rbms3	95	85.965	Cricetulus_griseus_crigri
ENSAOCG00000024104	-	99	76.577	ENSCSEG00000010011	RBMS3	99	77.027	Cynoglossus_semilaevis
ENSAOCG00000024104	-	100	90.575	ENSCSEG00000014677	-	94	100.000	Cynoglossus_semilaevis
ENSAOCG00000024104	-	100	91.494	ENSCVAG00000022814	-	100	99.217	Cyprinodon_variegatus
ENSAOCG00000024104	-	99	77.221	ENSCVAG00000022354	rbms3	99	77.449	Cyprinodon_variegatus
ENSAOCG00000024104	-	99	83.141	ENSDARG00000044574	rbms3	95	94.891	Danio_rerio
ENSAOCG00000024104	-	99	82.460	ENSDNOG00000016645	RBMS3	99	82.353	Dasypus_novemcinctus
ENSAOCG00000024104	-	99	82.232	ENSDORG00000007220	Rbms3	99	82.127	Dipodomys_ordii
ENSAOCG00000024104	-	87	83.333	ENSETEG00000009485	-	80	70.286	Echinops_telfairi
ENSAOCG00000024104	-	63	53.763	ENSEBUG00000005830	rbms3	86	55.263	Eptatretus_burgeri
ENSAOCG00000024104	-	99	81.777	ENSEASG00005006152	RBMS3	99	81.777	Equus_asinus_asinus
ENSAOCG00000024104	-	99	82.688	ENSECAG00000017871	RBMS3	99	82.579	Equus_caballus
ENSAOCG00000024104	-	90	76.866	ENSEEUG00000014337	RBMS3	100	76.866	Erinaceus_europaeus
ENSAOCG00000024104	-	92	88.778	ENSELUG00000006905	-	100	96.335	Esox_lucius
ENSAOCG00000024104	-	99	74.208	ENSELUG00000002862	rbms3	94	82.561	Esox_lucius
ENSAOCG00000024104	-	99	82.460	ENSFCAG00000002130	RBMS3	99	82.353	Felis_catus
ENSAOCG00000024104	-	99	82.648	ENSFALG00000009165	RBMS3	99	82.648	Ficedula_albicollis
ENSAOCG00000024104	-	99	82.005	ENSFDAG00000008278	RBMS3	99	81.900	Fukomys_damarensis
ENSAOCG00000024104	-	88	72.539	ENSFHEG00000004787	RBMS3	94	76.294	Fundulus_heteroclitus
ENSAOCG00000024104	-	90	86.398	ENSGMOG00000002600	-	96	89.421	Gadus_morhua
ENSAOCG00000024104	-	99	82.648	ENSGALG00000011439	RBMS3	99	82.648	Gallus_gallus
ENSAOCG00000024104	-	100	91.743	ENSGAFG00000003329	-	98	96.098	Gambusia_affinis
ENSAOCG00000024104	-	99	77.045	ENSGAFG00000000168	rbms3	95	84.553	Gambusia_affinis
ENSAOCG00000024104	-	66	78.621	ENSGAGG00000004039	RBMS3	99	88.192	Gopherus_agassizii
ENSAOCG00000024104	-	99	82.916	ENSGGOG00000007228	RBMS3	99	82.805	Gorilla_gorilla
ENSAOCG00000024104	-	56	86.800	ENSHBUG00000021196	rbms3	87	86.800	Haplochromis_burtoni
ENSAOCG00000024104	-	100	98.977	ENSHBUG00000019785	-	100	94.508	Haplochromis_burtoni
ENSAOCG00000024104	-	99	82.460	ENSHGLG00000002170	RBMS3	99	82.353	Heterocephalus_glaber_female
ENSAOCG00000024104	-	99	82.460	ENSHGLG00100014278	RBMS3	99	82.353	Heterocephalus_glaber_male
ENSAOCG00000024104	-	100	90.138	ENSHCOG00000007894	-	98	97.449	Hippocampus_comes
ENSAOCG00000024104	-	99	84.065	ENSIPUG00000017680	rbms3	99	84.065	Ictalurus_punctatus
ENSAOCG00000024104	-	99	82.916	ENSSTOG00000006324	RBMS3	99	82.805	Ictidomys_tridecemlineatus
ENSAOCG00000024104	-	99	79.186	ENSJJAG00000014708	Rbms3	99	79.412	Jaculus_jaculus
ENSAOCG00000024104	-	99	75.336	ENSKMAG00000020500	rbms3	99	75.561	Kryptolebias_marmoratus
ENSAOCG00000024104	-	100	93.130	ENSKMAG00000012586	-	100	93.130	Kryptolebias_marmoratus
ENSAOCG00000024104	-	62	66.784	ENSLBEG00000006677	rbms3	97	75.379	Labrus_bergylta
ENSAOCG00000024104	-	100	98.210	ENSLBEG00000027388	-	100	98.210	Labrus_bergylta
ENSAOCG00000024104	-	99	84.439	ENSLACG00000010581	RBMS3	99	84.439	Latimeria_chalumnae
ENSAOCG00000024104	-	71	81.818	ENSLOCG00000002328	rbms3	99	92.042	Lepisosteus_oculatus
ENSAOCG00000024104	-	99	82.688	ENSLAFG00000000354	RBMS3	99	82.579	Loxodonta_africana
ENSAOCG00000024104	-	99	82.688	ENSMFAG00000033300	RBMS3	99	82.579	Macaca_fascicularis
ENSAOCG00000024104	-	99	81.777	ENSMMUG00000004404	RBMS3	99	81.777	Macaca_mulatta
ENSAOCG00000024104	-	99	82.688	ENSMNEG00000035839	RBMS3	99	82.579	Macaca_nemestrina
ENSAOCG00000024104	-	100	82.579	ENSMLEG00000029464	RBMS3	99	82.472	Mandrillus_leucophaeus
ENSAOCG00000024104	-	99	76.802	ENSMAMG00000024043	rbms3	99	77.928	Mastacembelus_armatus
ENSAOCG00000024104	-	100	99.233	ENSMAMG00000002176	-	100	99.233	Mastacembelus_armatus
ENSAOCG00000024104	-	100	94.129	ENSMZEG00005026469	-	100	94.318	Maylandia_zebra
ENSAOCG00000024104	-	99	75.792	ENSMZEG00005006308	rbms3	99	76.244	Maylandia_zebra
ENSAOCG00000024104	-	99	81.236	ENSMAUG00000016436	Rbms3	95	85.965	Mesocricetus_auratus
ENSAOCG00000024104	-	99	83.144	ENSMICG00000049249	RBMS3	99	83.032	Microcebus_murinus
ENSAOCG00000024104	-	99	81.007	ENSMOCG00000006997	Rbms3	95	85.714	Microtus_ochrogaster
ENSAOCG00000024104	-	100	90.345	ENSMMOG00000015071	-	98	94.621	Mola_mola
ENSAOCG00000024104	-	82	76.694	ENSMMOG00000008471	RBMS3	89	87.842	Mola_mola
ENSAOCG00000024104	-	99	79.065	ENSMODG00000015125	RBMS3	99	78.619	Monodelphis_domestica
ENSAOCG00000024104	-	100	91.724	ENSMALG00000009155	-	100	91.724	Monopterus_albus
ENSAOCG00000024104	-	99	76.351	ENSMALG00000019536	RBMS3	99	74.718	Monopterus_albus
ENSAOCG00000024104	-	99	80.320	MGP_CAROLIEiJ_G0032783	Rbms3	100	90.338	Mus_caroli
ENSAOCG00000024104	-	99	81.007	ENSMUSG00000039607	Rbms3	100	91.787	Mus_musculus
ENSAOCG00000024104	-	99	80.822	MGP_PahariEiJ_G0015650	Rbms3	100	91.787	Mus_pahari
ENSAOCG00000024104	-	99	81.007	MGP_SPRETEiJ_G0033930	Rbms3	100	91.787	Mus_spretus
ENSAOCG00000024104	-	99	82.916	ENSMPUG00000011956	RBMS3	99	82.805	Mustela_putorius_furo
ENSAOCG00000024104	-	99	81.777	ENSMLUG00000000659	RBMS3	99	81.777	Myotis_lucifugus
ENSAOCG00000024104	-	99	82.949	ENSNGAG00000014039	Rbms3	99	82.838	Nannospalax_galili
ENSAOCG00000024104	-	100	91.264	ENSNBRG00000018065	-	100	91.264	Neolamprologus_brichardi
ENSAOCG00000024104	-	99	82.916	ENSNLEG00000004129	RBMS3	99	82.805	Nomascus_leucogenys
ENSAOCG00000024104	-	99	75.909	ENSMEUG00000004772	RBMS3	99	75.909	Notamacropus_eugenii
ENSAOCG00000024104	-	99	82.579	ENSOPRG00000006808	RBMS3	85	82.353	Ochotona_princeps
ENSAOCG00000024104	-	99	82.916	ENSODEG00000003651	RBMS3	99	82.805	Octodon_degus
ENSAOCG00000024104	-	99	71.330	ENSONIG00000007172	rbms3	90	84.140	Oreochromis_niloticus
ENSAOCG00000024104	-	99	82.658	ENSOANG00000010529	RBMS3	99	82.658	Ornithorhynchus_anatinus
ENSAOCG00000024104	-	99	82.460	ENSOCUG00000004840	RBMS3	99	82.353	Oryctolagus_cuniculus
ENSAOCG00000024104	-	100	90.805	ENSORLG00000002306	-	100	90.805	Oryzias_latipes
ENSAOCG00000024104	-	99	75.682	ENSORLG00000005370	RBMS3	99	75.455	Oryzias_latipes
ENSAOCG00000024104	-	99	75.455	ENSORLG00020022674	RBMS3	99	75.227	Oryzias_latipes_hni
ENSAOCG00000024104	-	100	91.034	ENSORLG00020008496	-	99	95.904	Oryzias_latipes_hni
ENSAOCG00000024104	-	99	75.909	ENSORLG00015005509	rbms3	99	75.682	Oryzias_latipes_hsok
ENSAOCG00000024104	-	100	91.034	ENSORLG00015015719	-	100	91.034	Oryzias_latipes_hsok
ENSAOCG00000024104	-	99	76.364	ENSOMEG00000014805	RBMS3	95	83.065	Oryzias_melastigma
ENSAOCG00000024104	-	100	87.763	ENSOMEG00000007677	-	100	98.168	Oryzias_melastigma
ENSAOCG00000024104	-	99	82.460	ENSOARG00000014684	RBMS3	99	82.353	Ovis_aries
ENSAOCG00000024104	-	99	82.916	ENSPPAG00000036519	RBMS3	99	82.805	Pan_paniscus
ENSAOCG00000024104	-	99	82.232	ENSPPRG00000002761	RBMS3	99	82.127	Panthera_pardus
ENSAOCG00000024104	-	99	82.232	ENSPTIG00000011568	RBMS3	99	82.127	Panthera_tigris_altaica
ENSAOCG00000024104	-	99	82.916	ENSPTRG00000014709	RBMS3	99	82.805	Pan_troglodytes
ENSAOCG00000024104	-	100	82.472	ENSPANG00000010234	RBMS3	100	79.780	Papio_anubis
ENSAOCG00000024104	-	56	93.776	ENSPKIG00000007989	-	94	93.776	Paramormyrops_kingsleyae
ENSAOCG00000024104	-	99	81.963	ENSPSIG00000005269	RBMS3	99	81.963	Pelodiscus_sinensis
ENSAOCG00000024104	-	92	90.524	ENSPMGG00000021683	-	100	98.691	Periophthalmus_magnuspinnatus
ENSAOCG00000024104	-	82	76.567	ENSPMGG00000021544	rbms3	86	86.145	Periophthalmus_magnuspinnatus
ENSAOCG00000024104	-	99	81.818	ENSPEMG00000001117	Rbms3	99	81.713	Peromyscus_maniculatus_bairdii
ENSAOCG00000024104	-	82	84.239	ENSPCIG00000006106	RBMS3	89	89.720	Phascolarctos_cinereus
ENSAOCG00000024104	-	99	77.500	ENSPFOG00000017887	rbms3	99	77.727	Poecilia_formosa
ENSAOCG00000024104	-	77	74.118	ENSPLAG00000016866	-	82	81.931	Poecilia_latipinna
ENSAOCG00000024104	-	100	91.743	ENSPMEG00000002993	-	98	96.341	Poecilia_mexicana
ENSAOCG00000024104	-	100	75.737	ENSPREG00000011880	rbms3	92	84.906	Poecilia_reticulata
ENSAOCG00000024104	-	100	89.885	ENSPREG00000018221	-	94	100.000	Poecilia_reticulata
ENSAOCG00000024104	-	99	69.910	ENSPPYG00000014050	RBMS3	82	69.910	Pongo_abelii
ENSAOCG00000024104	-	86	75.403	ENSPCAG00000006307	RBMS3	84	75.403	Procavia_capensis
ENSAOCG00000024104	-	99	83.144	ENSPCOG00000017136	RBMS3	99	83.032	Propithecus_coquereli
ENSAOCG00000024104	-	89	88.000	ENSPVAG00000014037	RBMS3	99	73.756	Pteropus_vampyrus
ENSAOCG00000024104	-	99	75.566	ENSPNYG00000010546	rbms3	99	76.018	Pundamilia_nyererei
ENSAOCG00000024104	-	100	93.197	ENSPNYG00000012624	-	100	96.896	Pundamilia_nyererei
ENSAOCG00000024104	-	99	83.834	ENSPNAG00000001800	rbms3	99	83.834	Pygocentrus_nattereri
ENSAOCG00000024104	-	99	81.336	ENSRNOG00000025881	Rbms3	99	81.236	Rattus_norvegicus
ENSAOCG00000024104	-	99	82.460	ENSRBIG00000035863	RBMS3	99	82.353	Rhinopithecus_bieti
ENSAOCG00000024104	-	88	83.636	ENSRROG00000027512	RBMS3	94	85.751	Rhinopithecus_roxellana
ENSAOCG00000024104	-	99	82.916	ENSSBOG00000020232	RBMS3	99	82.805	Saimiri_boliviensis_boliviensis
ENSAOCG00000024104	-	88	76.883	ENSSHAG00000002411	RBMS3	95	82.527	Sarcophilus_harrisii
ENSAOCG00000024104	-	100	88.506	ENSSFOG00015008578	rbms3	98	94.933	Scleropages_formosus
ENSAOCG00000024104	-	98	85.647	ENSSMAG00000020065	-	95	93.352	Scophthalmus_maximus
ENSAOCG00000024104	-	99	73.708	ENSSMAG00000004997	rbms3	99	83.607	Scophthalmus_maximus
ENSAOCG00000024104	-	99	76.577	ENSSDUG00000013656	RBMS3	99	77.027	Seriola_dumerili
ENSAOCG00000024104	-	100	95.985	ENSSDUG00000019287	-	100	95.985	Seriola_dumerili
ENSAOCG00000024104	-	99	76.286	ENSSLDG00000020276	RBMS3	99	76.734	Seriola_lalandi_dorsalis
ENSAOCG00000024104	-	100	95.793	ENSSLDG00000013224	-	100	95.793	Seriola_lalandi_dorsalis
ENSAOCG00000024104	-	79	72.464	ENSSARG00000000695	RBMS3	94	73.926	Sorex_araneus
ENSAOCG00000024104	-	71	78.778	ENSSPUG00000017197	RBMS3	97	86.195	Sphenodon_punctatus
ENSAOCG00000024104	-	100	96.958	ENSSPAG00000003983	-	100	96.958	Stegastes_partitus
ENSAOCG00000024104	-	99	75.955	ENSSPAG00000020693	rbms3	92	86.905	Stegastes_partitus
ENSAOCG00000024104	-	99	82.460	ENSSSCG00000036381	RBMS3	99	82.353	Sus_scrofa
ENSAOCG00000024104	-	77	81.602	ENSTGUG00000003572	RBMS3	99	85.586	Taeniopygia_guttata
ENSAOCG00000024104	-	99	74.550	ENSTRUG00000021719	RBMS3	99	74.550	Takifugu_rubripes
ENSAOCG00000024104	-	100	80.000	ENSTRUG00000007482	-	89	93.352	Takifugu_rubripes
ENSAOCG00000024104	-	79	84.348	ENSTBEG00000005362	RBMS3	94	87.106	Tupaia_belangeri
ENSAOCG00000024104	-	99	82.232	ENSTTRG00000006202	RBMS3	99	82.127	Tursiops_truncatus
ENSAOCG00000024104	-	99	82.916	ENSUMAG00000000263	RBMS3	99	82.805	Ursus_maritimus
ENSAOCG00000024104	-	88	74.227	ENSVPAG00000003842	RBMS3	94	75.321	Vicugna_pacos
ENSAOCG00000024104	-	88	84.021	ENSVVUG00000004660	RBMS3	94	92.202	Vulpes_vulpes
ENSAOCG00000024104	-	71	79.032	ENSXETG00000032055	RBMS3	98	82.085	Xenopus_tropicalis
ENSAOCG00000024104	-	92	78.947	ENSXCOG00000019600	-	100	83.548	Xiphophorus_couchianus
ENSAOCG00000024104	-	100	91.972	ENSXMAG00000014382	-	98	96.341	Xiphophorus_maculatus
ENSAOCG00000024104	-	99	75.283	ENSXMAG00000021783	rbms3	99	75.510	Xiphophorus_maculatus