EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000024545 (Gene tree)
Gene ID: 111566169
Gene Symbol: slbp
Alias: cb157|sb:cb157|si:dkey-102m7.2
Full Name: stem-loop binding protein
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 6763 bases
Position: chrNXFZ01001977.1:442008-448770
Accession: 111566169
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000019280	SLBP_RNA_bind	PF15247.6	2e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000029052	-	2417	XM_023266628	ENSAOCP00000019280	282 (aa)	XP_023122396	UPI000C30D0D0

Gene Model

Click here to download ENSAOCG00000024545's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000024545's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000024545	slbp	73	58.173	ENSG00000163950	SLBP	80	54.268	Homo_sapiens
ENSAOCG00000024545	slbp	100	94.326	ENSAPOG00000004953	slbp	100	94.326	Acanthochromis_polyacanthus
ENSAOCG00000024545	slbp	57	64.417	ENSAMEG00000016915	SLBP	88	55.238	Ailuropoda_melanoleuca
ENSAOCG00000024545	slbp	93	76.628	ENSACIG00000022308	slbp	96	76.628	Amphilophus_citrinellus
ENSAOCG00000024545	slbp	100	99.291	ENSAPEG00000017629	slbp	100	99.291	Amphiprion_percula
ENSAOCG00000024545	slbp	100	82.332	ENSATEG00000016358	slbp	100	82.332	Anabas_testudineus
ENSAOCG00000024545	slbp	72	51.942	ENSAPLG00000015989	-	88	54.854	Anas_platyrhynchos
ENSAOCG00000024545	slbp	72	56.338	ENSANAG00000034769	SLBP	68	64.671	Aotus_nancymaae
ENSAOCG00000024545	slbp	100	78.169	ENSACLG00000007036	-	100	78.169	Astatotilapia_calliptera
ENSAOCG00000024545	slbp	98	59.286	ENSAMXG00000014527	slbp	99	59.286	Astyanax_mexicanus
ENSAOCG00000024545	slbp	74	57.346	ENSBTAG00000001328	SLBP	82	51.172	Bos_taurus
ENSAOCG00000024545	slbp	72	58.252	ENSCJAG00000001790	SLBP	71	56.019	Callithrix_jacchus
ENSAOCG00000024545	slbp	87	49.425	ENSCAFG00000015016	SLBP	71	56.808	Canis_familiaris
ENSAOCG00000024545	slbp	87	49.425	ENSCAFG00020012334	SLBP	71	56.808	Canis_lupus_dingo
ENSAOCG00000024545	slbp	77	56.422	ENSCHIG00000019364	SLBP	87	49.814	Capra_hircus
ENSAOCG00000024545	slbp	79	52.155	ENSTSYG00000000376	SLBP	92	50.187	Carlito_syrichta
ENSAOCG00000024545	slbp	55	63.522	ENSCPOG00000000031	SLBP	81	49.206	Cavia_porcellus
ENSAOCG00000024545	slbp	73	58.173	ENSCATG00000029173	SLBP	68	64.671	Cercocebus_atys
ENSAOCG00000024545	slbp	60	62.573	ENSCLAG00000008157	SLBP	91	48.302	Chinchilla_lanigera
ENSAOCG00000024545	slbp	63	48.603	ENSCSAG00000015628	SLBP	60	48.352	Chlorocebus_sabaeus
ENSAOCG00000024545	slbp	74	57.895	ENSCPBG00000000746	SLBP	71	57.895	Chrysemys_picta_bellii
ENSAOCG00000024545	slbp	57	64.815	ENSCANG00000041008	SLBP	74	63.636	Colobus_angolensis_palliatus
ENSAOCG00000024545	slbp	91	47.985	ENSCGRG00001012991	-	94	47.826	Cricetulus_griseus_chok1gshd
ENSAOCG00000024545	slbp	88	49.430	ENSCGRG00001009760	-	90	50.000	Cricetulus_griseus_chok1gshd
ENSAOCG00000024545	slbp	88	49.430	ENSCGRG00000004506	Slbp	90	50.000	Cricetulus_griseus_crigri
ENSAOCG00000024545	slbp	98	73.188	ENSCSEG00000020337	-	99	73.188	Cynoglossus_semilaevis
ENSAOCG00000024545	slbp	90	70.428	ENSCVAG00000019592	-	92	70.428	Cyprinodon_variegatus
ENSAOCG00000024545	slbp	97	54.643	ENSDARG00000100558	slbp	88	55.357	Danio_rerio
ENSAOCG00000024545	slbp	74	57.143	ENSDNOG00000047539	SLBP	73	57.143	Dasypus_novemcinctus
ENSAOCG00000024545	slbp	58	58.537	ENSDORG00000003028	Slbp	91	64.901	Dipodomys_ordii
ENSAOCG00000024545	slbp	78	52.252	ENSETEG00000004641	SLBP	91	54.148	Echinops_telfairi
ENSAOCG00000024545	slbp	88	50.000	ENSECAG00000011689	SLBP	80	49.810	Equus_caballus
ENSAOCG00000024545	slbp	96	61.397	ENSELUG00000012854	slbp	95	61.397	Esox_lucius
ENSAOCG00000024545	slbp	60	58.824	ENSFCAG00000000169	SLBP	81	54.976	Felis_catus
ENSAOCG00000024545	slbp	88	51.200	ENSFALG00000010003	-	84	51.200	Ficedula_albicollis
ENSAOCG00000024545	slbp	61	60.795	ENSFDAG00000007592	SLBP	89	51.373	Fukomys_damarensis
ENSAOCG00000024545	slbp	92	73.664	ENSFHEG00000007497	slbp	99	70.397	Fundulus_heteroclitus
ENSAOCG00000024545	slbp	55	72.611	ENSGMOG00000015352	slbp	100	71.875	Gadus_morhua
ENSAOCG00000024545	slbp	88	52.823	ENSGALG00000015712	SLBP	84	52.823	Gallus_gallus
ENSAOCG00000024545	slbp	100	71.731	ENSGAFG00000019577	slbp	100	71.805	Gambusia_affinis
ENSAOCG00000024545	slbp	93	72.519	ENSGACG00000019596	slbp	95	72.519	Gasterosteus_aculeatus
ENSAOCG00000024545	slbp	74	56.731	ENSGAGG00000012096	SLBP	81	56.731	Gopherus_agassizii
ENSAOCG00000024545	slbp	73	58.173	ENSGGOG00000003167	SLBP	68	64.671	Gorilla_gorilla
ENSAOCG00000024545	slbp	100	78.521	ENSHBUG00000003338	-	100	78.521	Haplochromis_burtoni
ENSAOCG00000024545	slbp	59	52.695	ENSHGLG00000008313	-	72	47.368	Heterocephalus_glaber_female
ENSAOCG00000024545	slbp	60	55.747	ENSHGLG00000010461	-	64	54.651	Heterocephalus_glaber_female
ENSAOCG00000024545	slbp	60	55.747	ENSHGLG00100014906	-	76	49.057	Heterocephalus_glaber_male
ENSAOCG00000024545	slbp	59	53.892	ENSHGLG00100010510	-	72	48.325	Heterocephalus_glaber_male
ENSAOCG00000024545	slbp	60	63.158	ENSHGLG00100014018	-	91	60.000	Heterocephalus_glaber_male
ENSAOCG00000024545	slbp	100	71.479	ENSHCOG00000013425	slbp	100	71.479	Hippocampus_comes
ENSAOCG00000024545	slbp	85	55.967	ENSIPUG00000016780	slbp	88	55.967	Ictalurus_punctatus
ENSAOCG00000024545	slbp	65	59.677	ENSSTOG00000003262	SLBP	78	54.506	Ictidomys_tridecemlineatus
ENSAOCG00000024545	slbp	88	50.190	ENSJJAG00000020549	-	90	50.000	Jaculus_jaculus
ENSAOCG00000024545	slbp	88	50.769	ENSJJAG00000002394	-	82	51.181	Jaculus_jaculus
ENSAOCG00000024545	slbp	100	70.732	ENSKMAG00000008187	slbp	100	70.732	Kryptolebias_marmoratus
ENSAOCG00000024545	slbp	99	75.445	ENSLBEG00000024709	slbp	100	75.445	Labrus_bergylta
ENSAOCG00000024545	slbp	91	48.062	ENSLACG00000014623	SLBP	89	48.062	Latimeria_chalumnae
ENSAOCG00000024545	slbp	98	58.571	ENSLOCG00000011027	slbp	92	58.571	Lepisosteus_oculatus
ENSAOCG00000024545	slbp	72	58.252	ENSLAFG00000012933	SLBP	83	57.075	Loxodonta_africana
ENSAOCG00000024545	slbp	72	58.252	ENSMFAG00000030130	SLBP	62	59.864	Macaca_fascicularis
ENSAOCG00000024545	slbp	73	56.279	ENSMMUG00000032303	SLBP	73	63.529	Macaca_mulatta
ENSAOCG00000024545	slbp	53	50.314	ENSMNEG00000008082	SLBP	64	50.000	Macaca_nemestrina
ENSAOCG00000024545	slbp	59	64.072	ENSMLEG00000024639	SLBP	66	63.529	Mandrillus_leucophaeus
ENSAOCG00000024545	slbp	99	76.429	ENSMAMG00000001046	-	99	76.429	Mastacembelus_armatus
ENSAOCG00000024545	slbp	100	78.521	ENSMZEG00005017261	-	100	78.521	Maylandia_zebra
ENSAOCG00000024545	slbp	72	55.665	ENSMGAG00000013085	SLBP	87	55.665	Meleagris_gallopavo
ENSAOCG00000024545	slbp	93	48.387	ENSMAUG00000009490	Slbp	94	48.227	Mesocricetus_auratus
ENSAOCG00000024545	slbp	74	53.636	ENSMICG00000014244	SLBP	89	50.388	Microcebus_murinus
ENSAOCG00000024545	slbp	74	55.714	ENSMOCG00000015826	Slbp	86	56.784	Microtus_ochrogaster
ENSAOCG00000024545	slbp	93	66.031	ENSMMOG00000010181	slbp	95	66.031	Mola_mola
ENSAOCG00000024545	slbp	74	56.604	ENSMODG00000004304	SLBP	89	51.172	Monodelphis_domestica
ENSAOCG00000024545	slbp	100	81.625	ENSMALG00000013883	-	74	81.625	Monopterus_albus
ENSAOCG00000024545	slbp	76	55.556	MGP_CAROLIEiJ_G0027117	Slbp	83	57.000	Mus_caroli
ENSAOCG00000024545	slbp	87	49.049	ENSMUSG00000004642	Slbp	84	57.000	Mus_musculus
ENSAOCG00000024545	slbp	87	49.049	MGP_PahariEiJ_G0016901	Slbp	83	57.000	Mus_pahari
ENSAOCG00000024545	slbp	87	49.049	MGP_SPRETEiJ_G0028113	Slbp	84	57.000	Mus_spretus
ENSAOCG00000024545	slbp	61	53.977	ENSMPUG00000011139	SLBP	83	53.631	Mustela_putorius_furo
ENSAOCG00000024545	slbp	59	60.241	ENSMLUG00000004425	SLBP	82	50.490	Myotis_lucifugus
ENSAOCG00000024545	slbp	76	55.814	ENSNGAG00000020799	Slbp	85	48.659	Nannospalax_galili
ENSAOCG00000024545	slbp	84	81.250	ENSNBRG00000006044	-	91	81.250	Neolamprologus_brichardi
ENSAOCG00000024545	slbp	73	56.279	ENSNLEG00000000048	SLBP	68	64.671	Nomascus_leucogenys
ENSAOCG00000024545	slbp	57	64.198	ENSMEUG00000002501	SLBP	89	63.095	Notamacropus_eugenii
ENSAOCG00000024545	slbp	60	63.743	ENSODEG00000012641	SLBP	87	51.163	Octodon_degus
ENSAOCG00000024545	slbp	97	79.562	ENSONIG00000017469	-	98	79.562	Oreochromis_niloticus
ENSAOCG00000024545	slbp	58	64.634	ENSOANG00000014243	SLBP	69	64.634	Ornithorhynchus_anatinus
ENSAOCG00000024545	slbp	100	63.251	ENSORLG00000024887	-	100	63.251	Oryzias_latipes
ENSAOCG00000024545	slbp	100	62.057	ENSORLG00020007798	slbp	100	62.057	Oryzias_latipes_hni
ENSAOCG00000024545	slbp	100	62.898	ENSORLG00015016656	slbp	100	62.898	Oryzias_latipes_hsok
ENSAOCG00000024545	slbp	92	65.385	ENSOMEG00000010818	slbp	100	63.251	Oryzias_melastigma
ENSAOCG00000024545	slbp	61	62.644	ENSOGAG00000009750	SLBP	90	51.154	Otolemur_garnettii
ENSAOCG00000024545	slbp	58	63.253	ENSOARG00000016090	SLBP	88	54.762	Ovis_aries
ENSAOCG00000024545	slbp	73	58.173	ENSPPAG00000033300	SLBP	68	64.671	Pan_paniscus
ENSAOCG00000024545	slbp	60	58.235	ENSPPRG00000016897	SLBP	89	50.397	Panthera_pardus
ENSAOCG00000024545	slbp	72	58.252	ENSPTRG00000015832	SLBP	68	64.671	Pan_troglodytes
ENSAOCG00000024545	slbp	73	55.607	ENSPANG00000004932	SLBP	68	64.671	Papio_anubis
ENSAOCG00000024545	slbp	91	61.390	ENSPKIG00000006183	slbp	87	61.390	Paramormyrops_kingsleyae
ENSAOCG00000024545	slbp	87	59.109	ENSPMGG00000017684	-	92	68.394	Periophthalmus_magnuspinnatus
ENSAOCG00000024545	slbp	88	49.430	ENSPEMG00000018369	Slbp	90	49.248	Peromyscus_maniculatus_bairdii
ENSAOCG00000024545	slbp	74	55.505	ENSPCIG00000013575	SLBP	70	50.382	Phascolarctos_cinereus
ENSAOCG00000024545	slbp	100	72.438	ENSPFOG00000000462	slbp	100	72.438	Poecilia_formosa
ENSAOCG00000024545	slbp	100	72.438	ENSPLAG00000008300	slbp	100	72.438	Poecilia_latipinna
ENSAOCG00000024545	slbp	100	72.438	ENSPMEG00000020807	slbp	100	72.438	Poecilia_mexicana
ENSAOCG00000024545	slbp	100	72.792	ENSPREG00000004561	slbp	100	72.792	Poecilia_reticulata
ENSAOCG00000024545	slbp	73	58.173	ENSPPYG00000014529	SLBP	90	50.385	Pongo_abelii
ENSAOCG00000024545	slbp	73	56.250	ENSPCOG00000017399	SLBP	68	64.671	Propithecus_coquereli
ENSAOCG00000024545	slbp	74	53.810	ENSPVAG00000002807	SLBP	84	48.450	Pteropus_vampyrus
ENSAOCG00000024545	slbp	100	78.521	ENSPNYG00000005451	-	100	78.521	Pundamilia_nyererei
ENSAOCG00000024545	slbp	95	56.985	ENSPNAG00000018503	slbp	91	58.915	Pygocentrus_nattereri
ENSAOCG00000024545	slbp	87	49.049	ENSRNOG00000037162	Slbp	90	48.689	Rattus_norvegicus
ENSAOCG00000024545	slbp	73	58.173	ENSRBIG00000039159	SLBP	68	64.671	Rhinopithecus_bieti
ENSAOCG00000024545	slbp	73	58.454	ENSRROG00000030081	SLBP	91	50.193	Rhinopithecus_roxellana
ENSAOCG00000024545	slbp	74	55.046	ENSSHAG00000013939	SLBP	81	50.000	Sarcophilus_harrisii
ENSAOCG00000024545	slbp	93	59.023	ENSSFOG00015019429	slbp	92	59.023	Scleropages_formosus
ENSAOCG00000024545	slbp	100	80.212	ENSSMAG00000016028	-	100	80.212	Scophthalmus_maximus
ENSAOCG00000024545	slbp	97	83.273	ENSSDUG00000000855	-	98	83.273	Seriola_dumerili
ENSAOCG00000024545	slbp	53	87.333	ENSSLDG00000022893	-	86	87.333	Seriola_lalandi_dorsalis
ENSAOCG00000024545	slbp	98	58.099	ENSSLDG00000007554	-	92	57.746	Seriola_lalandi_dorsalis
ENSAOCG00000024545	slbp	88	47.390	ENSSPUG00000016007	SLBP	86	50.988	Sphenodon_punctatus
ENSAOCG00000024545	slbp	100	87.279	ENSSPAG00000004021	slbp	100	88.803	Stegastes_partitus
ENSAOCG00000024545	slbp	74	56.667	ENSSSCG00000008676	SLBP	82	51.181	Sus_scrofa
ENSAOCG00000024545	slbp	88	51.613	ENSTGUG00000010626	-	91	50.588	Taeniopygia_guttata
ENSAOCG00000024545	slbp	99	70.251	ENSTRUG00000000688	slbp	99	70.251	Takifugu_rubripes
ENSAOCG00000024545	slbp	92	68.077	ENSTNIG00000000484	-	100	68.077	Tetraodon_nigroviridis
ENSAOCG00000024545	slbp	74	31.429	ENSTBEG00000004085	SLBP	67	43.158	Tupaia_belangeri
ENSAOCG00000024545	slbp	57	64.198	ENSTTRG00000010901	-	88	54.854	Tursiops_truncatus
ENSAOCG00000024545	slbp	57	59.259	ENSTTRG00000004010	-	91	57.988	Tursiops_truncatus
ENSAOCG00000024545	slbp	73	57.488	ENSUAMG00000012990	SLBP	81	50.787	Ursus_americanus
ENSAOCG00000024545	slbp	87	49.042	ENSVVUG00000015578	-	71	56.338	Vulpes_vulpes
ENSAOCG00000024545	slbp	94	49.057	ENSXETG00000003876	slbp	92	49.057	Xenopus_tropicalis
ENSAOCG00000024545	slbp	94	71.053	ENSXCOG00000008275	slbp	100	71.053	Xiphophorus_couchianus
ENSAOCG00000024545	slbp	100	71.731	ENSXMAG00000001331	-	99	71.731	Xiphophorus_maculatus