EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000024593 (Gene tree)
Gene ID: 111575135
Gene Symbol: snrnp200
Alias: fb63a09|si:ch211-251j10.5|wu:fb63a09
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 16406 bases
Position: chrNXFZ01000704.1:4357-20762
Accession: 111575135
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000019319	ResIII	PF04851.15	9.3e-27	1	2
ENSAOCP00000019319	ResIII	PF04851.15	9.3e-27	2	2
ENSAOCP00000032305	ResIII	PF04851.15	1.2e-26	1	2
ENSAOCP00000032305	ResIII	PF04851.15	1.2e-26	2	2
ENSAOCP00000019319	DEAD	PF00270.29	3e-54	1	2
ENSAOCP00000019319	DEAD	PF00270.29	3e-54	2	2
ENSAOCP00000032305	DEAD	PF00270.29	4.5e-54	1	2
ENSAOCP00000032305	DEAD	PF00270.29	4.5e-54	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000029087	-	5583	-	ENSAOCP00000019319	1860 (aa)	-	-
ENSAOCT00000029090	-	7929	XM_023280077	ENSAOCP00000032305	2136 (aa)	XP_023135845	UPI000C300EE1

Gene Model

Click here to download ENSAOCG00000024593's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000024593's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000024593	snrnp200	70	32.465	ENSAOCG00000022839	hfm1	86	31.967
ENSAOCG00000024593	snrnp200	90	44.836	ENSAOCG00000005106	ascc3	91	42.472

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000024593	snrnp200	100	90.043	ENSG00000144028	SNRNP200	99	90.794	Homo_sapiens
ENSAOCG00000024593	snrnp200	100	99.672	ENSAPOG00000010223	snrnp200	100	99.672	Acanthochromis_polyacanthus
ENSAOCG00000024593	snrnp200	100	90.096	ENSAMEG00000008996	SNRNP200	99	90.841	Ailuropoda_melanoleuca
ENSAOCG00000024593	snrnp200	100	97.213	ENSACIG00000001764	snrnp200	98	97.856	Amphilophus_citrinellus
ENSAOCG00000024593	snrnp200	100	99.892	ENSAPEG00000012554	snrnp200	100	99.892	Amphiprion_percula
ENSAOCG00000024593	snrnp200	100	98.736	ENSATEG00000022522	snrnp200	100	98.736	Anabas_testudineus
ENSAOCG00000024593	snrnp200	100	90.150	ENSAPLG00000004313	SNRNP200	99	90.918	Anas_platyrhynchos
ENSAOCG00000024593	snrnp200	99	89.814	ENSACAG00000000434	SNRNP200	100	89.814	Anolis_carolinensis
ENSAOCG00000024593	snrnp200	99	87.903	ENSANAG00000036625	SNRNP200	99	88.004	Aotus_nancymaae
ENSAOCG00000024593	snrnp200	100	97.706	ENSACLG00000011188	snrnp200	100	97.706	Astatotilapia_calliptera
ENSAOCG00000024593	snrnp200	99	94.546	ENSAMXG00000005684	snrnp200	99	94.546	Astyanax_mexicanus
ENSAOCG00000024593	snrnp200	100	89.829	ENSBTAG00000000848	SNRNP200	99	90.606	Bos_taurus
ENSAOCG00000024593	snrnp200	100	89.989	ENSCJAG00000007514	SNRNP200	99	90.747	Callithrix_jacchus
ENSAOCG00000024593	snrnp200	100	89.173	ENSCAFG00020019979	SNRNP200	99	91.857	Canis_lupus_dingo
ENSAOCG00000024593	snrnp200	100	89.829	ENSCHIG00000020611	SNRNP200	99	90.559	Capra_hircus
ENSAOCG00000024593	snrnp200	100	90.096	ENSTSYG00000010467	SNRNP200	99	90.841	Carlito_syrichta
ENSAOCG00000024593	snrnp200	100	89.642	ENSCAPG00000017234	SNRNP200	99	90.330	Cavia_aperea
ENSAOCG00000024593	snrnp200	100	89.882	ENSCPOG00000006776	SNRNP200	99	90.653	Cavia_porcellus
ENSAOCG00000024593	snrnp200	100	89.989	ENSCCAG00000033962	SNRNP200	99	90.747	Cebus_capucinus
ENSAOCG00000024593	snrnp200	100	90.043	ENSCATG00000015790	SNRNP200	99	90.794	Cercocebus_atys
ENSAOCG00000024593	snrnp200	100	89.882	ENSCLAG00000004116	SNRNP200	99	90.700	Chinchilla_lanigera
ENSAOCG00000024593	snrnp200	100	90.043	ENSCSAG00000017369	SNRNP200	99	90.794	Chlorocebus_sabaeus
ENSAOCG00000024593	snrnp200	75	92.105	ENSCHOG00000012981	-	58	93.701	Choloepus_hoffmanni
ENSAOCG00000024593	snrnp200	100	89.898	ENSCPBG00000022571	SNRNP200	99	95.000	Chrysemys_picta_bellii
ENSAOCG00000024593	snrnp200	100	75.400	ENSCING00000005082	-	99	75.972	Ciona_intestinalis
ENSAOCG00000024593	snrnp200	96	89.950	ENSCANG00000033932	SNRNP200	99	90.509	Colobus_angolensis_palliatus
ENSAOCG00000024593	snrnp200	100	90.043	ENSCGRG00001022610	Snrnp200	99	90.794	Cricetulus_griseus_chok1gshd
ENSAOCG00000024593	snrnp200	100	89.471	ENSCGRG00000016472	Snrnp200	99	90.291	Cricetulus_griseus_crigri
ENSAOCG00000024593	snrnp200	100	95.552	ENSCSEG00000016399	snrnp200	99	96.425	Cynoglossus_semilaevis
ENSAOCG00000024593	snrnp200	100	91.901	ENSCVAG00000017631	snrnp200	100	91.901	Cyprinodon_variegatus
ENSAOCG00000024593	snrnp200	100	94.335	ENSDARG00000077536	snrnp200	99	94.358	Danio_rerio
ENSAOCG00000024593	snrnp200	100	88.597	ENSDNOG00000011227	SNRNP200	99	89.573	Dasypus_novemcinctus
ENSAOCG00000024593	snrnp200	100	87.340	ENSDORG00000005861	Snrnp200	99	88.420	Dipodomys_ordii
ENSAOCG00000024593	snrnp200	100	73.929	FBgn0263599	l(3)72Ab	99	74.251	Drosophila_melanogaster
ENSAOCG00000024593	snrnp200	94	95.673	ENSETEG00000000162	SNRNP200	74	89.922	Echinops_telfairi
ENSAOCG00000024593	snrnp200	84	81.093	ENSEBUG00000016524	snrnp200	95	81.093	Eptatretus_burgeri
ENSAOCG00000024593	snrnp200	100	88.865	ENSEASG00005001884	SNRNP200	99	89.710	Equus_asinus_asinus
ENSAOCG00000024593	snrnp200	100	90.043	ENSECAG00000019675	SNRNP200	99	90.841	Equus_caballus
ENSAOCG00000024593	snrnp200	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSAOCG00000024593	snrnp200	100	96.303	ENSELUG00000018948	snrnp200	100	96.303	Esox_lucius
ENSAOCG00000024593	snrnp200	100	90.096	ENSFCAG00000010699	SNRNP200	99	90.888	Felis_catus
ENSAOCG00000024593	snrnp200	93	86.607	ENSFALG00000001368	-	94	86.607	Ficedula_albicollis
ENSAOCG00000024593	snrnp200	100	89.829	ENSFDAG00000004683	SNRNP200	99	90.606	Fukomys_damarensis
ENSAOCG00000024593	snrnp200	100	94.476	ENSFHEG00000003786	snrnp200	100	94.476	Fundulus_heteroclitus
ENSAOCG00000024593	snrnp200	100	94.907	ENSGMOG00000004881	snrnp200	99	94.791	Gadus_morhua
ENSAOCG00000024593	snrnp200	100	94.757	ENSGAFG00000010807	snrnp200	100	94.757	Gambusia_affinis
ENSAOCG00000024593	snrnp200	100	97.525	ENSGACG00000011474	snrnp200	99	97.525	Gasterosteus_aculeatus
ENSAOCG00000024593	snrnp200	95	92.972	ENSGAGG00000016069	SNRNP200	97	98.387	Gopherus_agassizii
ENSAOCG00000024593	snrnp200	100	90.043	ENSGGOG00000005174	SNRNP200	99	90.794	Gorilla_gorilla
ENSAOCG00000024593	snrnp200	100	94.391	ENSHBUG00000011322	snrnp200	99	95.032	Haplochromis_burtoni
ENSAOCG00000024593	snrnp200	100	89.882	ENSHGLG00000006654	SNRNP200	99	90.653	Heterocephalus_glaber_female
ENSAOCG00000024593	snrnp200	100	89.882	ENSHGLG00100018594	SNRNP200	99	90.653	Heterocephalus_glaber_male
ENSAOCG00000024593	snrnp200	100	90.096	ENSSTOG00000016351	SNRNP200	99	90.888	Ictidomys_tridecemlineatus
ENSAOCG00000024593	snrnp200	100	89.882	ENSJJAG00000023659	Snrnp200	99	90.559	Jaculus_jaculus
ENSAOCG00000024593	snrnp200	100	94.494	ENSKMAG00000003665	snrnp200	100	94.494	Kryptolebias_marmoratus
ENSAOCG00000024593	snrnp200	100	97.940	ENSLBEG00000021585	snrnp200	100	97.940	Labrus_bergylta
ENSAOCG00000024593	snrnp200	82	92.262	ENSLACG00000000226	SNRNP200	99	92.262	Latimeria_chalumnae
ENSAOCG00000024593	snrnp200	100	94.153	ENSLOCG00000015198	snrnp200	99	94.176	Lepisosteus_oculatus
ENSAOCG00000024593	snrnp200	100	89.775	ENSLAFG00000015626	SNRNP200	99	90.700	Loxodonta_africana
ENSAOCG00000024593	snrnp200	100	89.989	ENSMFAG00000040174	SNRNP200	99	92.151	Macaca_fascicularis
ENSAOCG00000024593	snrnp200	100	89.989	ENSMMUG00000023261	SNRNP200	99	90.747	Macaca_mulatta
ENSAOCG00000024593	snrnp200	100	89.936	ENSMNEG00000032398	SNRNP200	99	90.700	Macaca_nemestrina
ENSAOCG00000024593	snrnp200	100	90.043	ENSMLEG00000019083	SNRNP200	99	92.151	Mandrillus_leucophaeus
ENSAOCG00000024593	snrnp200	100	97.520	ENSMAMG00000007851	snrnp200	100	97.520	Mastacembelus_armatus
ENSAOCG00000024593	snrnp200	100	94.391	ENSMZEG00005010787	snrnp200	99	95.032	Maylandia_zebra
ENSAOCG00000024593	snrnp200	99	89.892	ENSMGAG00000001831	SNRNP200	99	90.590	Meleagris_gallopavo
ENSAOCG00000024593	snrnp200	100	90.096	ENSMAUG00000011825	Snrnp200	99	90.841	Mesocricetus_auratus
ENSAOCG00000024593	snrnp200	100	90.096	ENSMICG00000004710	SNRNP200	99	90.841	Microcebus_murinus
ENSAOCG00000024593	snrnp200	100	88.561	ENSMOCG00000011814	Snrnp200	99	89.009	Microtus_ochrogaster
ENSAOCG00000024593	snrnp200	100	96.208	ENSMMOG00000014167	snrnp200	100	96.208	Mola_mola
ENSAOCG00000024593	snrnp200	100	90.043	ENSMODG00000008475	SNRNP200	99	90.747	Monodelphis_domestica
ENSAOCG00000024593	snrnp200	100	97.846	ENSMALG00000001973	snrnp200	100	97.846	Monopterus_albus
ENSAOCG00000024593	snrnp200	100	89.936	MGP_CAROLIEiJ_G0024250	Snrnp200	99	90.700	Mus_caroli
ENSAOCG00000024593	snrnp200	100	89.989	ENSMUSG00000003660	Snrnp200	99	90.747	Mus_musculus
ENSAOCG00000024593	snrnp200	100	89.989	MGP_PahariEiJ_G0025695	Snrnp200	99	90.747	Mus_pahari
ENSAOCG00000024593	snrnp200	95	95.862	MGP_SPRETEiJ_G0025170	Snrnp200	99	93.521	Mus_spretus
ENSAOCG00000024593	snrnp200	100	90.043	ENSMPUG00000008949	SNRNP200	99	90.888	Mustela_putorius_furo
ENSAOCG00000024593	snrnp200	100	86.938	ENSMLUG00000027511	-	99	87.647	Myotis_lucifugus
ENSAOCG00000024593	snrnp200	100	89.578	ENSMLUG00000010493	SNRNP200	99	90.525	Myotis_lucifugus
ENSAOCG00000024593	snrnp200	100	90.043	ENSNGAG00000021993	Snrnp200	99	90.794	Nannospalax_galili
ENSAOCG00000024593	snrnp200	92	96.924	ENSNBRG00000017960	snrnp200	98	97.620	Neolamprologus_brichardi
ENSAOCG00000024593	snrnp200	99	86.425	ENSNLEG00000000025	SNRNP200	99	86.614	Nomascus_leucogenys
ENSAOCG00000024593	snrnp200	99	94.845	ENSMEUG00000010532	SNRNP200	78	93.878	Notamacropus_eugenii
ENSAOCG00000024593	snrnp200	98	89.010	ENSOPRG00000015464	SNRNP200	99	87.459	Ochotona_princeps
ENSAOCG00000024593	snrnp200	100	89.829	ENSODEG00000008366	SNRNP200	99	90.700	Octodon_degus
ENSAOCG00000024593	snrnp200	100	97.706	ENSONIG00000010714	snrnp200	100	97.706	Oreochromis_niloticus
ENSAOCG00000024593	snrnp200	100	90.096	ENSOCUG00000009864	SNRNP200	99	90.841	Oryctolagus_cuniculus
ENSAOCG00000024593	snrnp200	100	95.659	ENSORLG00000012286	snrnp200	100	96.392	Oryzias_latipes
ENSAOCG00000024593	snrnp200	100	95.766	ENSORLG00020004648	snrnp200	100	96.392	Oryzias_latipes_hni
ENSAOCG00000024593	snrnp200	100	95.766	ENSORLG00015019114	snrnp200	100	96.439	Oryzias_latipes_hsok
ENSAOCG00000024593	snrnp200	100	96.770	ENSOMEG00000011834	snrnp200	100	96.770	Oryzias_melastigma
ENSAOCG00000024593	snrnp200	100	90.096	ENSOGAG00000006879	SNRNP200	99	90.841	Otolemur_garnettii
ENSAOCG00000024593	snrnp200	100	89.513	ENSOARG00000013949	SNRNP200	99	89.906	Ovis_aries
ENSAOCG00000024593	snrnp200	100	90.043	ENSPPAG00000041559	SNRNP200	99	90.794	Pan_paniscus
ENSAOCG00000024593	snrnp200	100	90.096	ENSPPRG00000004435	SNRNP200	99	90.888	Panthera_pardus
ENSAOCG00000024593	snrnp200	100	89.615	ENSPTIG00000006380	SNRNP200	99	90.465	Panthera_tigris_altaica
ENSAOCG00000024593	snrnp200	100	90.043	ENSPTRG00000012230	SNRNP200	99	90.794	Pan_troglodytes
ENSAOCG00000024593	snrnp200	100	89.989	ENSPANG00000006017	SNRNP200	99	90.747	Papio_anubis
ENSAOCG00000024593	snrnp200	100	95.227	ENSPKIG00000014762	snrnp200	99	95.306	Paramormyrops_kingsleyae
ENSAOCG00000024593	snrnp200	100	89.085	ENSPSIG00000008580	SNRNP200	99	90.000	Pelodiscus_sinensis
ENSAOCG00000024593	snrnp200	100	89.989	ENSPCIG00000023050	SNRNP200	99	90.700	Phascolarctos_cinereus
ENSAOCG00000024593	snrnp200	100	96.958	ENSPFOG00000015110	snrnp200	100	96.958	Poecilia_formosa
ENSAOCG00000024593	snrnp200	99	96.590	ENSPLAG00000006711	snrnp200	99	97.085	Poecilia_latipinna
ENSAOCG00000024593	snrnp200	99	96.590	ENSPMEG00000021166	snrnp200	99	97.085	Poecilia_mexicana
ENSAOCG00000024593	snrnp200	100	97.004	ENSPREG00000008875	snrnp200	100	97.004	Poecilia_reticulata
ENSAOCG00000024593	snrnp200	100	90.043	ENSPPYG00000012068	SNRNP200	99	90.794	Pongo_abelii
ENSAOCG00000024593	snrnp200	98	94.872	ENSPCAG00000008536	SNRNP200	85	97.872	Procavia_capensis
ENSAOCG00000024593	snrnp200	100	90.043	ENSPCOG00000024608	SNRNP200	99	90.794	Propithecus_coquereli
ENSAOCG00000024593	snrnp200	96	91.402	ENSPVAG00000005860	SNRNP200	92	91.649	Pteropus_vampyrus
ENSAOCG00000024593	snrnp200	100	92.904	ENSPNYG00000017476	snrnp200	100	92.904	Pundamilia_nyererei
ENSAOCG00000024593	snrnp200	100	90.501	ENSPNAG00000010998	snrnp200	99	90.555	Pygocentrus_nattereri
ENSAOCG00000024593	snrnp200	100	90.096	ENSRNOG00000012157	Snrnp200	99	90.841	Rattus_norvegicus
ENSAOCG00000024593	snrnp200	100	90.043	ENSRBIG00000044690	-	99	90.794	Rhinopithecus_bieti
ENSAOCG00000024593	snrnp200	100	90.043	ENSRROG00000037952	-	99	90.794	Rhinopithecus_roxellana
ENSAOCG00000024593	snrnp200	100	89.989	ENSSBOG00000035471	SNRNP200	99	90.747	Saimiri_boliviensis_boliviensis
ENSAOCG00000024593	snrnp200	99	90.000	ENSSHAG00000000758	SNRNP200	99	90.541	Sarcophilus_harrisii
ENSAOCG00000024593	snrnp200	100	94.644	ENSSFOG00015018826	snrnp200	99	95.254	Scleropages_formosus
ENSAOCG00000024593	snrnp200	100	98.221	ENSSMAG00000005463	snrnp200	100	98.221	Scophthalmus_maximus
ENSAOCG00000024593	snrnp200	100	99.017	ENSSDUG00000021410	snrnp200	100	99.017	Seriola_dumerili
ENSAOCG00000024593	snrnp200	100	98.736	ENSSLDG00000010884	snrnp200	100	98.736	Seriola_lalandi_dorsalis
ENSAOCG00000024593	snrnp200	95	88.740	ENSSARG00000010728	SNRNP200	96	88.710	Sorex_araneus
ENSAOCG00000024593	snrnp200	100	90.150	ENSSPUG00000003726	-	99	91.029	Sphenodon_punctatus
ENSAOCG00000024593	snrnp200	100	99.485	ENSSPAG00000001842	snrnp200	100	99.485	Stegastes_partitus
ENSAOCG00000024593	snrnp200	100	90.150	ENSSSCG00000008127	SNRNP200	99	90.888	Sus_scrofa
ENSAOCG00000024593	snrnp200	99	82.209	ENSTGUG00000014475	-	100	82.209	Taeniopygia_guttata
ENSAOCG00000024593	snrnp200	100	96.957	ENSTRUG00000001307	snrnp200	100	96.957	Takifugu_rubripes
ENSAOCG00000024593	snrnp200	99	91.111	ENSTNIG00000004320	snrnp200	100	84.993	Tetraodon_nigroviridis
ENSAOCG00000024593	snrnp200	84	93.427	ENSTBEG00000003329	-	67	93.427	Tupaia_belangeri
ENSAOCG00000024593	snrnp200	100	89.882	ENSTTRG00000004983	SNRNP200	99	90.653	Tursiops_truncatus
ENSAOCG00000024593	snrnp200	83	82.059	ENSUAMG00000008395	-	95	83.333	Ursus_americanus
ENSAOCG00000024593	snrnp200	100	90.096	ENSUMAG00000012385	SNRNP200	99	90.888	Ursus_maritimus
ENSAOCG00000024593	snrnp200	87	93.361	ENSVPAG00000006434	SNRNP200	66	93.361	Vicugna_pacos
ENSAOCG00000024593	snrnp200	100	90.150	ENSVVUG00000026247	SNRNP200	99	90.675	Vulpes_vulpes
ENSAOCG00000024593	snrnp200	100	89.877	ENSXETG00000001243	snrnp200	99	90.333	Xenopus_tropicalis
ENSAOCG00000024593	snrnp200	99	96.890	ENSXMAG00000002058	snrnp200	98	97.320	Xiphophorus_maculatus