EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000000296 (Gene tree)
Gene ID: -
Gene Symbol: usb1
Alias: zgc:91896
Full Name: U6 snRNA biogenesis 1
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 13205 bases
Position: chr4:35854988-35868192
Accession: ZDB-GENE-040801-197
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000000396	HVSL	PF09749.9	6.3e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000000406	-	3359	-	ENSAPEP00000000396	282 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000000296's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000000296's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000000296	usb1	80	53.744	ENSG00000103005	USB1	100	54.673	Homo_sapiens
ENSAPEG00000000296	usb1	99	89.680	ENSAPOG00000011942	usb1	99	89.680	Acanthochromis_polyacanthus
ENSAPEG00000000296	usb1	99	48.754	ENSAMEG00000017205	USB1	97	50.000	Ailuropoda_melanoleuca
ENSAPEG00000000296	usb1	83	79.237	ENSACIG00000012234	usb1	99	70.922	Amphilophus_citrinellus
ENSAPEG00000000296	usb1	100	99.291	ENSAOCG00000014831	usb1	100	99.291	Amphiprion_ocellaris
ENSAPEG00000000296	usb1	100	75.177	ENSATEG00000009348	usb1	100	75.177	Anabas_testudineus
ENSAPEG00000000296	usb1	79	56.000	ENSAPLG00000002756	USB1	99	56.000	Anas_platyrhynchos
ENSAPEG00000000296	usb1	80	52.193	ENSACAG00000015481	USB1	99	52.193	Anolis_carolinensis
ENSAPEG00000000296	usb1	80	53.304	ENSANAG00000035640	USB1	95	49.801	Aotus_nancymaae
ENSAPEG00000000296	usb1	99	76.157	ENSACLG00000020586	usb1	99	77.465	Astatotilapia_calliptera
ENSAPEG00000000296	usb1	99	57.986	ENSAMXG00000040146	usb1	95	57.986	Astyanax_mexicanus
ENSAPEG00000000296	usb1	99	48.043	ENSBTAG00000015758	USB1	90	51.261	Bos_taurus
ENSAPEG00000000296	usb1	80	54.626	ENSCJAG00000011733	USB1	95	50.996	Callithrix_jacchus
ENSAPEG00000000296	usb1	82	51.724	ENSCAFG00000008556	USB1	71	47.687	Canis_familiaris
ENSAPEG00000000296	usb1	99	46.786	ENSCAFG00020009263	USB1	85	53.097	Canis_lupus_dingo
ENSAPEG00000000296	usb1	99	47.331	ENSCHIG00000024290	USB1	97	49.219	Capra_hircus
ENSAPEG00000000296	usb1	80	53.304	ENSTSYG00000006997	USB1	86	53.304	Carlito_syrichta
ENSAPEG00000000296	usb1	79	44.643	ENSCAPG00000009057	USB1	96	44.643	Cavia_aperea
ENSAPEG00000000296	usb1	99	48.754	ENSCPOG00000014325	USB1	83	54.464	Cavia_porcellus
ENSAPEG00000000296	usb1	80	54.185	ENSCCAG00000022132	USB1	95	50.598	Cebus_capucinus
ENSAPEG00000000296	usb1	80	54.626	ENSCATG00000032174	USB1	95	50.996	Cercocebus_atys
ENSAPEG00000000296	usb1	61	53.757	ENSCLAG00000007363	USB1	87	55.556	Chinchilla_lanigera
ENSAPEG00000000296	usb1	80	54.185	ENSCSAG00000004783	USB1	95	50.598	Chlorocebus_sabaeus
ENSAPEG00000000296	usb1	81	55.652	ENSCPBG00000026943	USB1	98	51.246	Chrysemys_picta_bellii
ENSAPEG00000000296	usb1	80	54.867	ENSCANG00000037135	USB1	86	54.867	Colobus_angolensis_palliatus
ENSAPEG00000000296	usb1	99	49.110	ENSCGRG00001011243	USB1	85	53.744	Cricetulus_griseus_chok1gshd
ENSAPEG00000000296	usb1	99	49.110	ENSCGRG00000013252	USB1	85	53.744	Cricetulus_griseus_crigri
ENSAPEG00000000296	usb1	100	68.440	ENSCSEG00000013881	usb1	99	67.368	Cynoglossus_semilaevis
ENSAPEG00000000296	usb1	79	75.000	ENSCVAG00000009252	usb1	98	75.000	Cyprinodon_variegatus
ENSAPEG00000000296	usb1	88	61.044	ENSDARG00000003841	usb1	100	56.897	Danio_rerio
ENSAPEG00000000296	usb1	99	48.592	ENSDORG00000001888	Usb1	98	50.000	Dipodomys_ordii
ENSAPEG00000000296	usb1	75	41.589	FBgn0037713	CG16790	81	40.845	Drosophila_melanogaster
ENSAPEG00000000296	usb1	99	41.053	ENSETEG00000019682	USB1	98	40.702	Echinops_telfairi
ENSAPEG00000000296	usb1	94	41.573	ENSEBUG00000005889	usb1	98	41.883	Eptatretus_burgeri
ENSAPEG00000000296	usb1	99	48.754	ENSEASG00005005484	USB1	86	53.744	Equus_asinus_asinus
ENSAPEG00000000296	usb1	99	48.929	ENSECAG00000019493	USB1	78	53.982	Equus_caballus
ENSAPEG00000000296	usb1	61	50.289	ENSEEUG00000000154	USB1	58	50.980	Erinaceus_europaeus
ENSAPEG00000000296	usb1	89	65.079	ENSELUG00000010974	usb1	99	60.993	Esox_lucius
ENSAPEG00000000296	usb1	82	51.931	ENSFCAG00000002693	USB1	87	51.931	Felis_catus
ENSAPEG00000000296	usb1	99	48.057	ENSFALG00000006876	USB1	98	48.410	Ficedula_albicollis
ENSAPEG00000000296	usb1	99	47.331	ENSFDAG00000010052	USB1	84	53.571	Fukomys_damarensis
ENSAPEG00000000296	usb1	88	68.110	ENSFHEG00000012334	usb1	98	69.291	Fundulus_heteroclitus
ENSAPEG00000000296	usb1	79	73.874	ENSGMOG00000004228	usb1	99	73.874	Gadus_morhua
ENSAPEG00000000296	usb1	89	52.381	ENSGALG00000035604	USB1	98	50.178	Gallus_gallus
ENSAPEG00000000296	usb1	99	72.378	ENSGAFG00000021890	usb1	99	70.447	Gambusia_affinis
ENSAPEG00000000296	usb1	100	67.730	ENSGACG00000003257	usb1	100	68.440	Gasterosteus_aculeatus
ENSAPEG00000000296	usb1	99	52.482	ENSGAGG00000022572	USB1	98	51.773	Gopherus_agassizii
ENSAPEG00000000296	usb1	80	54.185	ENSGGOG00000017147	USB1	95	50.598	Gorilla_gorilla
ENSAPEG00000000296	usb1	99	75.801	ENSHBUG00000009823	usb1	99	78.092	Haplochromis_burtoni
ENSAPEG00000000296	usb1	99	47.857	ENSHGLG00000016078	USB1	83	53.097	Heterocephalus_glaber_female
ENSAPEG00000000296	usb1	99	47.857	ENSHGLG00100005562	USB1	83	53.097	Heterocephalus_glaber_male
ENSAPEG00000000296	usb1	77	74.312	ENSHCOG00000015633	usb1	86	74.888	Hippocampus_comes
ENSAPEG00000000296	usb1	99	57.639	ENSIPUG00000008601	usb1	100	56.250	Ictalurus_punctatus
ENSAPEG00000000296	usb1	99	48.582	ENSSTOG00000007548	USB1	98	48.582	Ictidomys_tridecemlineatus
ENSAPEG00000000296	usb1	99	49.822	ENSJJAG00000021859	Usb1	85	54.626	Jaculus_jaculus
ENSAPEG00000000296	usb1	94	75.940	ENSKMAG00000007200	usb1	99	70.000	Kryptolebias_marmoratus
ENSAPEG00000000296	usb1	91	69.498	ENSLBEG00000008452	usb1	86	67.626	Labrus_bergylta
ENSAPEG00000000296	usb1	77	51.584	ENSLACG00000000105	USB1	86	50.800	Latimeria_chalumnae
ENSAPEG00000000296	usb1	99	52.234	ENSLOCG00000000465	usb1	99	52.650	Lepisosteus_oculatus
ENSAPEG00000000296	usb1	99	38.966	ENSLAFG00000002267	USB1	98	38.144	Loxodonta_africana
ENSAPEG00000000296	usb1	80	54.626	ENSMFAG00000003926	USB1	95	50.996	Macaca_fascicularis
ENSAPEG00000000296	usb1	80	54.626	ENSMMUG00000022669	USB1	95	50.996	Macaca_mulatta
ENSAPEG00000000296	usb1	80	54.185	ENSMNEG00000042487	USB1	95	50.598	Macaca_nemestrina
ENSAPEG00000000296	usb1	80	54.626	ENSMLEG00000028756	USB1	95	50.996	Mandrillus_leucophaeus
ENSAPEG00000000296	usb1	100	76.325	ENSMAMG00000015092	usb1	100	73.519	Mastacembelus_armatus
ENSAPEG00000000296	usb1	99	75.445	ENSMZEG00005010008	usb1	99	77.739	Maylandia_zebra
ENSAPEG00000000296	usb1	99	49.822	ENSMAUG00000007832	Usb1	85	54.626	Mesocricetus_auratus
ENSAPEG00000000296	usb1	80	54.185	ENSMICG00000004900	USB1	86	54.185	Microcebus_murinus
ENSAPEG00000000296	usb1	99	49.466	ENSMOCG00000022647	Usb1	85	55.066	Microtus_ochrogaster
ENSAPEG00000000296	usb1	80	74.667	ENSMMOG00000000490	usb1	100	63.958	Mola_mola
ENSAPEG00000000296	usb1	99	48.057	ENSMODG00000014067	USB1	99	49.291	Monodelphis_domestica
ENSAPEG00000000296	usb1	99	71.174	ENSMALG00000005930	usb1	99	73.498	Monopterus_albus
ENSAPEG00000000296	usb1	99	49.110	MGP_CAROLIEiJ_G0031421	Usb1	99	51.786	Mus_caroli
ENSAPEG00000000296	usb1	99	49.110	ENSMUSG00000031792	Usb1	99	51.786	Mus_musculus
ENSAPEG00000000296	usb1	99	49.466	MGP_PahariEiJ_G0023019	Usb1	100	53.846	Mus_pahari
ENSAPEG00000000296	usb1	99	49.110	MGP_SPRETEiJ_G0032540	Usb1	85	53.947	Mus_spretus
ENSAPEG00000000296	usb1	99	49.466	ENSMPUG00000004684	USB1	93	50.385	Mustela_putorius_furo
ENSAPEG00000000296	usb1	80	54.185	ENSMLUG00000007400	USB1	98	54.185	Myotis_lucifugus
ENSAPEG00000000296	usb1	99	50.890	ENSNGAG00000009703	Usb1	98	50.890	Nannospalax_galili
ENSAPEG00000000296	usb1	99	69.258	ENSNBRG00000008747	usb1	99	79.343	Neolamprologus_brichardi
ENSAPEG00000000296	usb1	73	55.288	ENSNLEG00000003340	USB1	93	51.293	Nomascus_leucogenys
ENSAPEG00000000296	usb1	99	49.643	ENSODEG00000016214	USB1	85	55.310	Octodon_degus
ENSAPEG00000000296	usb1	99	78.014	ENSONIG00000011063	usb1	100	76.512	Oreochromis_niloticus
ENSAPEG00000000296	usb1	79	52.444	ENSOANG00000012118	USB1	94	52.444	Ornithorhynchus_anatinus
ENSAPEG00000000296	usb1	87	77.143	ENSORLG00000012479	usb1	99	71.174	Oryzias_latipes
ENSAPEG00000000296	usb1	87	76.327	ENSORLG00020018671	usb1	99	70.107	Oryzias_latipes_hni
ENSAPEG00000000296	usb1	87	77.551	ENSORLG00015009679	usb1	99	71.530	Oryzias_latipes_hsok
ENSAPEG00000000296	usb1	99	76.157	ENSOMEG00000012930	usb1	99	76.157	Oryzias_melastigma
ENSAPEG00000000296	usb1	83	48.936	ENSOGAG00000003273	USB1	85	50.661	Otolemur_garnettii
ENSAPEG00000000296	usb1	84	51.261	ENSOARG00000001107	USB1	91	51.261	Ovis_aries
ENSAPEG00000000296	usb1	80	53.744	ENSPPAG00000042137	USB1	95	50.199	Pan_paniscus
ENSAPEG00000000296	usb1	99	47.331	ENSPPRG00000024797	USB1	95	49.407	Panthera_pardus
ENSAPEG00000000296	usb1	82	51.073	ENSPTIG00000007506	USB1	95	49.012	Panthera_tigris_altaica
ENSAPEG00000000296	usb1	76	55.140	ENSPTRG00000008172	USB1	100	55.140	Pan_troglodytes
ENSAPEG00000000296	usb1	80	54.626	ENSPANG00000025138	USB1	95	50.996	Papio_anubis
ENSAPEG00000000296	usb1	90	59.073	ENSPKIG00000015109	usb1	99	55.853	Paramormyrops_kingsleyae
ENSAPEG00000000296	usb1	79	46.903	ENSPSIG00000004305	USB1	100	46.903	Pelodiscus_sinensis
ENSAPEG00000000296	usb1	79	67.857	ENSPMGG00000017725	usb1	86	67.857	Periophthalmus_magnuspinnatus
ENSAPEG00000000296	usb1	99	50.177	ENSPEMG00000016183	Usb1	98	50.177	Peromyscus_maniculatus_bairdii
ENSAPEG00000000296	usb1	79	49.115	ENSPMAG00000000462	usb1	95	49.115	Petromyzon_marinus
ENSAPEG00000000296	usb1	99	73.498	ENSPFOG00000011130	usb1	99	73.498	Poecilia_formosa
ENSAPEG00000000296	usb1	99	73.145	ENSPLAG00000009820	usb1	99	73.145	Poecilia_latipinna
ENSAPEG00000000296	usb1	99	73.498	ENSPMEG00000006402	usb1	99	73.498	Poecilia_mexicana
ENSAPEG00000000296	usb1	88	72.510	ENSPREG00000001047	usb1	99	73.307	Poecilia_reticulata
ENSAPEG00000000296	usb1	75	50.935	ENSPPYG00000007401	USB1	94	47.479	Pongo_abelii
ENSAPEG00000000296	usb1	80	53.304	ENSPCOG00000022612	USB1	86	53.304	Propithecus_coquereli
ENSAPEG00000000296	usb1	99	47.687	ENSPVAG00000004613	USB1	86	52.679	Pteropus_vampyrus
ENSAPEG00000000296	usb1	99	75.801	ENSPNYG00000022262	usb1	99	75.801	Pundamilia_nyererei
ENSAPEG00000000296	usb1	90	60.227	ENSPNAG00000011736	usb1	100	57.095	Pygocentrus_nattereri
ENSAPEG00000000296	usb1	99	50.178	ENSRNOG00000013216	Usb1	85	54.626	Rattus_norvegicus
ENSAPEG00000000296	usb1	76	55.607	ENSRBIG00000044466	USB1	100	55.607	Rhinopithecus_bieti
ENSAPEG00000000296	usb1	80	54.626	ENSRROG00000029211	USB1	95	50.996	Rhinopithecus_roxellana
ENSAPEG00000000296	usb1	80	54.626	ENSSBOG00000029362	USB1	95	50.996	Saimiri_boliviensis_boliviensis
ENSAPEG00000000296	usb1	77	51.613	ENSSHAG00000006993	USB1	90	51.982	Sarcophilus_harrisii
ENSAPEG00000000296	usb1	79	67.265	ENSSFOG00015023663	usb1	91	59.028	Scleropages_formosus
ENSAPEG00000000296	usb1	99	70.608	ENSSMAG00000015834	usb1	99	70.608	Scophthalmus_maximus
ENSAPEG00000000296	usb1	79	82.511	ENSSDUG00000002949	usb1	99	71.174	Seriola_dumerili
ENSAPEG00000000296	usb1	99	75.445	ENSSLDG00000014174	usb1	99	75.445	Seriola_lalandi_dorsalis
ENSAPEG00000000296	usb1	76	53.738	ENSSPUG00000006741	USB1	100	53.738	Sphenodon_punctatus
ENSAPEG00000000296	usb1	100	84.859	ENSSPAG00000007484	usb1	100	84.859	Stegastes_partitus
ENSAPEG00000000296	usb1	99	49.822	ENSSSCG00000002807	USB1	98	49.822	Sus_scrofa
ENSAPEG00000000296	usb1	74	56.872	ENSTGUG00000004792	USB1	87	55.405	Taeniopygia_guttata
ENSAPEG00000000296	usb1	100	67.730	ENSTRUG00000021069	usb1	100	67.376	Takifugu_rubripes
ENSAPEG00000000296	usb1	100	58.156	ENSTNIG00000000626	usb1	98	55.594	Tetraodon_nigroviridis
ENSAPEG00000000296	usb1	79	38.393	ENSTBEG00000001507	USB1	97	38.393	Tupaia_belangeri
ENSAPEG00000000296	usb1	82	52.790	ENSUAMG00000016823	USB1	97	50.385	Ursus_americanus
ENSAPEG00000000296	usb1	76	54.673	ENSUMAG00000021369	USB1	100	54.673	Ursus_maritimus
ENSAPEG00000000296	usb1	85	50.826	ENSVVUG00000023700	USB1	87	53.097	Vulpes_vulpes
ENSAPEG00000000296	usb1	76	56.221	ENSXETG00000013795	usb1	96	53.012	Xenopus_tropicalis
ENSAPEG00000000296	usb1	91	74.031	ENSXMAG00000024687	usb1	80	72.563	Xiphophorus_maculatus