EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000000868 (Gene tree)
Gene ID: -
Gene Symbol: npm1b
Alias: npm4
Full Name: nucleophosmin 1b
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 17339 bases
Position: chr13:30136620-30153958
Accession: ZDB-GENE-080723-7
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000001140	Nucleoplasmin	PF03066.15	1.7e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000001166	-	4080	-	ENSAPEP00000001140	293 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000000868's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000000868's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000000868	npm1b	95	43.836	ENSAPEG00000008594	npm1a	96	44.178

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000000868	npm1b	100	93.603	ENSAPOG00000004268	npm1b	100	93.939	Acanthochromis_polyacanthus
ENSAPEG00000000868	npm1b	100	98.986	ENSAOCG00000012549	npm1b	100	98.986	Amphiprion_ocellaris
ENSAPEG00000000868	npm1b	100	84.281	ENSATEG00000006254	npm1b	100	84.615	Anabas_testudineus
ENSAPEG00000000868	npm1b	95	43.151	ENSACAG00000015626	-	96	43.793	Anolis_carolinensis
ENSAPEG00000000868	npm1b	50	89.041	ENSACLG00000013812	npm1b	69	89.041	Astatotilapia_calliptera
ENSAPEG00000000868	npm1b	98	63.973	ENSAMXG00000042148	npm1b	99	64.646	Astyanax_mexicanus
ENSAPEG00000000868	npm1b	96	46.392	ENSCPBG00000021221	-	58	48.264	Chrysemys_picta_bellii
ENSAPEG00000000868	npm1b	100	78.667	ENSCSEG00000004530	npm1b	100	78.333	Cynoglossus_semilaevis
ENSAPEG00000000868	npm1b	100	75.585	ENSCVAG00000013016	npm1b	100	76.923	Cyprinodon_variegatus
ENSAPEG00000000868	npm1b	99	65.772	ENSDARG00000037675	npm1b	99	66.107	Danio_rerio
ENSAPEG00000000868	npm1b	99	63.072	ENSELUG00000022123	npm1b	99	62.745	Esox_lucius
ENSAPEG00000000868	npm1b	94	44.681	ENSFALG00000003320	-	94	46.809	Ficedula_albicollis
ENSAPEG00000000868	npm1b	100	75.083	ENSFHEG00000020794	npm1b	100	75.083	Fundulus_heteroclitus
ENSAPEG00000000868	npm1b	98	62.500	ENSGMOG00000002689	npm1b	100	63.176	Gadus_morhua
ENSAPEG00000000868	npm1b	98	43.269	ENSGALG00000002197	-	73	44.089	Gallus_gallus
ENSAPEG00000000868	npm1b	100	75.839	ENSGAFG00000017709	npm1b	100	76.846	Gambusia_affinis
ENSAPEG00000000868	npm1b	98	79.795	ENSGACG00000016706	npm1b	100	79.110	Gasterosteus_aculeatus
ENSAPEG00000000868	npm1b	95	45.833	ENSGAGG00000020250	-	96	46.713	Gopherus_agassizii
ENSAPEG00000000868	npm1b	100	77.592	ENSHBUG00000019903	npm1b	95	80.268	Haplochromis_burtoni
ENSAPEG00000000868	npm1b	100	77.365	ENSHCOG00000003895	npm1b	100	77.365	Hippocampus_comes
ENSAPEG00000000868	npm1b	99	61.333	ENSIPUG00000020165	npm1b	99	62.667	Ictalurus_punctatus
ENSAPEG00000000868	npm1b	99	79.863	ENSKMAG00000008260	npm1b	99	82.313	Kryptolebias_marmoratus
ENSAPEG00000000868	npm1b	94	39.423	ENSLACG00000001779	-	100	41.216	Latimeria_chalumnae
ENSAPEG00000000868	npm1b	93	46.959	ENSLOCG00000001942	npm1b	100	47.138	Lepisosteus_oculatus
ENSAPEG00000000868	npm1b	71	79.452	ENSMAMG00000015335	npm1b	100	79.452	Mastacembelus_armatus
ENSAPEG00000000868	npm1b	93	42.955	ENSMGAG00000001591	-	100	43.986	Meleagris_gallopavo
ENSAPEG00000000868	npm1b	81	85.950	ENSMALG00000015383	npm1b	100	85.537	Monopterus_albus
ENSAPEG00000000868	npm1b	50	89.726	ENSNBRG00000014133	npm1b	79	89.726	Neolamprologus_brichardi
ENSAPEG00000000868	npm1b	99	76.610	ENSONIG00000001397	npm1b	98	76.817	Oreochromis_niloticus
ENSAPEG00000000868	npm1b	100	66.554	ENSOMEG00000003414	npm1b	100	66.216	Oryzias_melastigma
ENSAPEG00000000868	npm1b	99	57.098	ENSPKIG00000020050	npm1b	99	57.413	Paramormyrops_kingsleyae
ENSAPEG00000000868	npm1b	96	46.392	ENSPSIG00000011204	-	92	46.690	Pelodiscus_sinensis
ENSAPEG00000000868	npm1b	93	38.328	ENSPMAG00000004930	npm1b	99	36.934	Petromyzon_marinus
ENSAPEG00000000868	npm1b	100	76.254	ENSPFOG00000018357	npm1b	100	76.589	Poecilia_formosa
ENSAPEG00000000868	npm1b	50	89.041	ENSPNYG00000001427	npm1b	69	89.041	Pundamilia_nyererei
ENSAPEG00000000868	npm1b	98	64.505	ENSPNAG00000005498	npm1b	99	65.188	Pygocentrus_nattereri
ENSAPEG00000000868	npm1b	99	57.338	ENSSFOG00015005064	npm1b	100	57.679	Scleropages_formosus
ENSAPEG00000000868	npm1b	100	83.108	ENSSMAG00000008088	npm1b	100	83.108	Scophthalmus_maximus
ENSAPEG00000000868	npm1b	100	86.242	ENSSDUG00000007726	npm1b	100	87.919	Seriola_dumerili
ENSAPEG00000000868	npm1b	100	86.577	ENSSLDG00000021396	npm1b	100	88.255	Seriola_lalandi_dorsalis
ENSAPEG00000000868	npm1b	100	91.919	ENSSPAG00000011152	npm1b	100	92.256	Stegastes_partitus
ENSAPEG00000000868	npm1b	93	45.390	ENSTGUG00000014970	-	100	44.681	Taeniopygia_guttata
ENSAPEG00000000868	npm1b	100	79.054	ENSTRUG00000008105	npm1b	95	78.305	Takifugu_rubripes
ENSAPEG00000000868	npm1b	99	75.254	ENSTNIG00000013057	npm1b	100	75.254	Tetraodon_nigroviridis
ENSAPEG00000000868	npm1b	98	43.396	ENSXETG00000008403	npm1	95	43.408	Xenopus_tropicalis
ENSAPEG00000000868	npm1b	100	76.254	ENSXMAG00000001986	npm1b	100	76.589	Xiphophorus_maculatus