EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000001316 (Gene tree)
Gene ID: -
Gene Symbol: rpusd1
Alias: fe26f08|wu:fe26f08|zgc:153465
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 3965 bases
Position: chr14:8960041-8964005
Accession: ZDB-GENE-060929-444
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000001745	PseudoU_synth_2	PF00849.22	2.5e-25	1	1
ENSAPEP00000001757	PseudoU_synth_2	PF00849.22	2.5e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000001786	-	1775	-	ENSAPEP00000001745	319 (aa)	-	-
ENSAPET00000001800	-	1854	-	ENSAPEP00000001757	319 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000001316's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000001316's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000001316	rpusd1	95	55.449	ENSG00000007376	RPUSD1	99	66.467	Homo_sapiens
ENSAPEG00000001316	rpusd1	97	94.194	ENSAPOG00000022221	rpusd1	100	92.581	Acanthochromis_polyacanthus
ENSAPEG00000001316	rpusd1	95	57.705	ENSAMEG00000007461	RPUSD1	98	58.033	Ailuropoda_melanoleuca
ENSAPEG00000001316	rpusd1	97	84.194	ENSACIG00000015863	rpusd1	100	84.194	Amphilophus_citrinellus
ENSAPEG00000001316	rpusd1	100	99.687	ENSAOCG00000021975	rpusd1	100	99.687	Amphiprion_ocellaris
ENSAPEG00000001316	rpusd1	97	85.806	ENSATEG00000002984	rpusd1	100	85.806	Anabas_testudineus
ENSAPEG00000001316	rpusd1	75	59.336	ENSAPLG00000012316	RPUSD1	98	58.506	Anas_platyrhynchos
ENSAPEG00000001316	rpusd1	95	63.158	ENSACAG00000008953	RPUSD1	99	63.158	Anolis_carolinensis
ENSAPEG00000001316	rpusd1	95	55.738	ENSANAG00000024709	RPUSD1	98	55.738	Aotus_nancymaae
ENSAPEG00000001316	rpusd1	97	84.244	ENSACLG00000013692	rpusd1	100	83.601	Astatotilapia_calliptera
ENSAPEG00000001316	rpusd1	96	67.752	ENSAMXG00000019802	rpusd1	99	66.993	Astyanax_mexicanus
ENSAPEG00000001316	rpusd1	95	59.016	ENSBTAG00000000179	RPUSD1	98	59.016	Bos_taurus
ENSAPEG00000001316	rpusd1	95	56.169	ENSCJAG00000012253	RPUSD1	98	55.410	Callithrix_jacchus
ENSAPEG00000001316	rpusd1	95	57.377	ENSCAFG00000019614	RPUSD1	98	58.033	Canis_familiaris
ENSAPEG00000001316	rpusd1	95	57.377	ENSCAFG00020008891	RPUSD1	98	58.033	Canis_lupus_dingo
ENSAPEG00000001316	rpusd1	95	59.344	ENSCHIG00000012872	RPUSD1	98	59.344	Capra_hircus
ENSAPEG00000001316	rpusd1	95	55.556	ENSTSYG00000036934	RPUSD1	98	55.556	Carlito_syrichta
ENSAPEG00000001316	rpusd1	95	56.393	ENSCAPG00000014219	RPUSD1	98	56.393	Cavia_aperea
ENSAPEG00000001316	rpusd1	95	56.393	ENSCPOG00000034604	RPUSD1	98	56.393	Cavia_porcellus
ENSAPEG00000001316	rpusd1	95	55.410	ENSCCAG00000034385	RPUSD1	98	55.410	Cebus_capucinus
ENSAPEG00000001316	rpusd1	95	56.090	ENSCATG00000042983	RPUSD1	98	55.738	Cercocebus_atys
ENSAPEG00000001316	rpusd1	95	55.738	ENSCLAG00000013966	RPUSD1	83	64.032	Chinchilla_lanigera
ENSAPEG00000001316	rpusd1	95	55.410	ENSCSAG00000012121	RPUSD1	98	55.410	Chlorocebus_sabaeus
ENSAPEG00000001316	rpusd1	95	61.184	ENSCPBG00000021101	RPUSD1	99	60.855	Chrysemys_picta_bellii
ENSAPEG00000001316	rpusd1	79	64.032	ENSCANG00000028576	RPUSD1	90	64.032	Colobus_angolensis_palliatus
ENSAPEG00000001316	rpusd1	95	56.209	ENSCGRG00001014253	Rpusd1	98	55.556	Cricetulus_griseus_chok1gshd
ENSAPEG00000001316	rpusd1	95	56.209	ENSCGRG00000017995	Rpusd1	98	55.556	Cricetulus_griseus_crigri
ENSAPEG00000001316	rpusd1	95	81.250	ENSCSEG00000018512	rpusd1	98	81.250	Cynoglossus_semilaevis
ENSAPEG00000001316	rpusd1	97	82.201	ENSCVAG00000022746	rpusd1	100	80.906	Cyprinodon_variegatus
ENSAPEG00000001316	rpusd1	95	70.724	ENSDARG00000060192	rpusd1	99	68.627	Danio_rerio
ENSAPEG00000001316	rpusd1	95	56.393	ENSDNOG00000003721	RPUSD1	98	56.393	Dasypus_novemcinctus
ENSAPEG00000001316	rpusd1	95	56.393	ENSDORG00000026656	Rpusd1	98	56.393	Dipodomys_ordii
ENSAPEG00000001316	rpusd1	93	46.006	ENSEBUG00000008767	rpusd1	79	50.958	Eptatretus_burgeri
ENSAPEG00000001316	rpusd1	95	56.410	ENSEASG00005018421	RPUSD1	74	56.311	Equus_asinus_asinus
ENSAPEG00000001316	rpusd1	96	72.222	ENSELUG00000014307	rpusd1	89	73.203	Esox_lucius
ENSAPEG00000001316	rpusd1	95	58.361	ENSFCAG00000010359	RPUSD1	98	57.705	Felis_catus
ENSAPEG00000001316	rpusd1	95	64.145	ENSFALG00000003211	RPUSD1	99	63.158	Ficedula_albicollis
ENSAPEG00000001316	rpusd1	95	56.393	ENSFDAG00000013398	RPUSD1	98	56.393	Fukomys_damarensis
ENSAPEG00000001316	rpusd1	97	80.259	ENSFHEG00000004736	rpusd1	100	80.583	Fundulus_heteroclitus
ENSAPEG00000001316	rpusd1	97	73.377	ENSGMOG00000010756	rpusd1	99	73.377	Gadus_morhua
ENSAPEG00000001316	rpusd1	95	62.171	ENSGALG00000005315	RPUSD1	99	62.500	Gallus_gallus
ENSAPEG00000001316	rpusd1	97	81.553	ENSGAFG00000009886	rpusd1	100	81.553	Gambusia_affinis
ENSAPEG00000001316	rpusd1	97	84.142	ENSGACG00000014276	rpusd1	100	84.142	Gasterosteus_aculeatus
ENSAPEG00000001316	rpusd1	95	61.184	ENSGAGG00000004181	RPUSD1	99	61.184	Gopherus_agassizii
ENSAPEG00000001316	rpusd1	95	56.230	ENSGGOG00000013997	RPUSD1	98	55.882	Gorilla_gorilla
ENSAPEG00000001316	rpusd1	97	84.566	ENSHBUG00000023728	rpusd1	100	83.923	Haplochromis_burtoni
ENSAPEG00000001316	rpusd1	95	56.066	ENSHGLG00000002595	RPUSD1	98	56.066	Heterocephalus_glaber_female
ENSAPEG00000001316	rpusd1	95	56.066	ENSHGLG00100014303	RPUSD1	98	56.066	Heterocephalus_glaber_male
ENSAPEG00000001316	rpusd1	96	74.837	ENSHCOG00000002390	rpusd1	99	72.903	Hippocampus_comes
ENSAPEG00000001316	rpusd1	95	65.677	ENSIPUG00000001570	rpusd1	98	64.686	Ictalurus_punctatus
ENSAPEG00000001316	rpusd1	95	56.393	ENSSTOG00000004276	RPUSD1	98	56.393	Ictidomys_tridecemlineatus
ENSAPEG00000001316	rpusd1	95	56.393	ENSJJAG00000015696	Rpusd1	98	56.393	Jaculus_jaculus
ENSAPEG00000001316	rpusd1	97	80.968	ENSKMAG00000017287	rpusd1	100	80.968	Kryptolebias_marmoratus
ENSAPEG00000001316	rpusd1	97	81.290	ENSLBEG00000022502	rpusd1	100	81.290	Labrus_bergylta
ENSAPEG00000001316	rpusd1	97	81.290	ENSLBEG00000013354	RPUSD1	100	81.290	Labrus_bergylta
ENSAPEG00000001316	rpusd1	95	61.184	ENSLACG00000008869	RPUSD1	99	60.526	Latimeria_chalumnae
ENSAPEG00000001316	rpusd1	67	80.841	ENSLOCG00000005682	rpusd1	99	80.841	Lepisosteus_oculatus
ENSAPEG00000001316	rpusd1	95	55.738	ENSLAFG00000002115	RPUSD1	98	55.738	Loxodonta_africana
ENSAPEG00000001316	rpusd1	95	56.090	ENSMFAG00000003961	RPUSD1	98	55.738	Macaca_fascicularis
ENSAPEG00000001316	rpusd1	95	56.090	ENSMMUG00000000842	RPUSD1	98	55.738	Macaca_mulatta
ENSAPEG00000001316	rpusd1	95	56.090	ENSMNEG00000042712	RPUSD1	98	55.738	Macaca_nemestrina
ENSAPEG00000001316	rpusd1	95	56.090	ENSMLEG00000030591	RPUSD1	98	55.738	Mandrillus_leucophaeus
ENSAPEG00000001316	rpusd1	97	88.103	ENSMAMG00000004735	rpusd1	100	87.781	Mastacembelus_armatus
ENSAPEG00000001316	rpusd1	97	84.244	ENSMZEG00005003214	rpusd1	100	83.601	Maylandia_zebra
ENSAPEG00000001316	rpusd1	94	62.458	ENSMGAG00000005447	RPUSD1	99	62.458	Meleagris_gallopavo
ENSAPEG00000001316	rpusd1	79	56.126	ENSMAUG00000019998	Rpusd1	96	56.126	Mesocricetus_auratus
ENSAPEG00000001316	rpusd1	95	55.738	ENSMICG00000017561	RPUSD1	98	55.738	Microcebus_murinus
ENSAPEG00000001316	rpusd1	95	57.049	ENSMOCG00000014082	Rpusd1	98	57.049	Microtus_ochrogaster
ENSAPEG00000001316	rpusd1	96	78.827	ENSMMOG00000012569	rpusd1	99	78.176	Mola_mola
ENSAPEG00000001316	rpusd1	96	62.418	ENSMODG00000016882	RPUSD1	99	62.092	Monodelphis_domestica
ENSAPEG00000001316	rpusd1	97	82.958	ENSMALG00000017818	rpusd1	100	82.637	Monopterus_albus
ENSAPEG00000001316	rpusd1	95	57.705	MGP_CAROLIEiJ_G0021244	Rpusd1	98	57.377	Mus_caroli
ENSAPEG00000001316	rpusd1	95	57.705	ENSMUSG00000041199	Rpusd1	98	57.705	Mus_musculus
ENSAPEG00000001316	rpusd1	95	56.721	MGP_PahariEiJ_G0023562	Rpusd1	98	57.377	Mus_pahari
ENSAPEG00000001316	rpusd1	95	57.705	MGP_SPRETEiJ_G0022155	Rpusd1	98	57.705	Mus_spretus
ENSAPEG00000001316	rpusd1	93	57.000	ENSMPUG00000015897	RPUSD1	96	57.667	Mustela_putorius_furo
ENSAPEG00000001316	rpusd1	95	57.377	ENSMLUG00000001089	RPUSD1	98	58.033	Myotis_lucifugus
ENSAPEG00000001316	rpusd1	95	55.738	ENSNGAG00000003595	Rpusd1	98	55.738	Nannospalax_galili
ENSAPEG00000001316	rpusd1	97	81.672	ENSNBRG00000006457	rpusd1	100	81.230	Neolamprologus_brichardi
ENSAPEG00000001316	rpusd1	52	46.154	ENSNLEG00000008424	-	97	46.154	Nomascus_leucogenys
ENSAPEG00000001316	rpusd1	95	61.935	ENSMEUG00000016049	RPUSD1	98	62.171	Notamacropus_eugenii
ENSAPEG00000001316	rpusd1	95	50.164	ENSOPRG00000008340	RPUSD1	98	50.164	Ochotona_princeps
ENSAPEG00000001316	rpusd1	95	56.066	ENSODEG00000016945	RPUSD1	83	63.636	Octodon_degus
ENSAPEG00000001316	rpusd1	96	84.740	ENSONIG00000015672	rpusd1	100	84.091	Oreochromis_niloticus
ENSAPEG00000001316	rpusd1	97	76.774	ENSORLG00000013009	rpusd1	100	75.241	Oryzias_latipes
ENSAPEG00000001316	rpusd1	97	76.452	ENSORLG00020010382	rpusd1	100	74.839	Oryzias_latipes_hni
ENSAPEG00000001316	rpusd1	97	75.806	ENSORLG00015021354	rpusd1	100	74.277	Oryzias_latipes_hsok
ENSAPEG00000001316	rpusd1	97	76.452	ENSOMEG00000021426	rpusd1	100	75.806	Oryzias_melastigma
ENSAPEG00000001316	rpusd1	95	54.754	ENSOGAG00000003795	RPUSD1	98	54.870	Otolemur_garnettii
ENSAPEG00000001316	rpusd1	95	59.344	ENSOARG00000014254	RPUSD1	98	59.344	Ovis_aries
ENSAPEG00000001316	rpusd1	95	55.769	ENSPPAG00000034797	RPUSD1	98	55.410	Pan_paniscus
ENSAPEG00000001316	rpusd1	95	58.689	ENSPPRG00000012389	RPUSD1	98	58.033	Panthera_pardus
ENSAPEG00000001316	rpusd1	96	58.306	ENSPTIG00000008545	RPUSD1	77	74.257	Panthera_tigris_altaica
ENSAPEG00000001316	rpusd1	95	55.769	ENSPTRG00000007565	RPUSD1	98	55.410	Pan_troglodytes
ENSAPEG00000001316	rpusd1	95	56.090	ENSPANG00000024401	RPUSD1	98	55.738	Papio_anubis
ENSAPEG00000001316	rpusd1	99	69.811	ENSPKIG00000018890	rpusd1	93	69.811	Paramormyrops_kingsleyae
ENSAPEG00000001316	rpusd1	95	63.487	ENSPSIG00000013945	RPUSD1	99	63.487	Pelodiscus_sinensis
ENSAPEG00000001316	rpusd1	97	75.405	ENSPMGG00000014950	rpusd1	99	74.434	Periophthalmus_magnuspinnatus
ENSAPEG00000001316	rpusd1	95	55.738	ENSPEMG00000000497	Rpusd1	98	56.066	Peromyscus_maniculatus_bairdii
ENSAPEG00000001316	rpusd1	96	53.871	ENSPMAG00000001563	rpusd1	99	53.746	Petromyzon_marinus
ENSAPEG00000001316	rpusd1	96	62.092	ENSPCIG00000021216	-	93	61.688	Phascolarctos_cinereus
ENSAPEG00000001316	rpusd1	97	82.201	ENSPFOG00000007946	rpusd1	100	82.201	Poecilia_formosa
ENSAPEG00000001316	rpusd1	97	82.524	ENSPLAG00000011925	rpusd1	100	82.524	Poecilia_latipinna
ENSAPEG00000001316	rpusd1	97	82.201	ENSPMEG00000002910	rpusd1	100	82.201	Poecilia_mexicana
ENSAPEG00000001316	rpusd1	97	82.848	ENSPREG00000019851	rpusd1	100	82.848	Poecilia_reticulata
ENSAPEG00000001316	rpusd1	95	43.607	ENSPCAG00000002258	RPUSD1	98	43.607	Procavia_capensis
ENSAPEG00000001316	rpusd1	95	54.098	ENSPCOG00000022582	RPUSD1	98	54.098	Propithecus_coquereli
ENSAPEG00000001316	rpusd1	95	52.459	ENSPVAG00000013104	RPUSD1	98	52.459	Pteropus_vampyrus
ENSAPEG00000001316	rpusd1	97	84.566	ENSPNYG00000024076	rpusd1	100	83.923	Pundamilia_nyererei
ENSAPEG00000001316	rpusd1	96	65.472	ENSPNAG00000013806	rpusd1	99	65.472	Pygocentrus_nattereri
ENSAPEG00000001316	rpusd1	95	57.705	ENSRNOG00000023639	Rpusd1	98	57.705	Rattus_norvegicus
ENSAPEG00000001316	rpusd1	95	56.090	ENSRBIG00000030238	RPUSD1	98	55.738	Rhinopithecus_bieti
ENSAPEG00000001316	rpusd1	95	56.090	ENSRROG00000036663	RPUSD1	98	55.738	Rhinopithecus_roxellana
ENSAPEG00000001316	rpusd1	95	56.721	ENSSBOG00000033063	RPUSD1	98	56.721	Saimiri_boliviensis_boliviensis
ENSAPEG00000001316	rpusd1	95	61.184	ENSSHAG00000013500	RPUSD1	98	61.111	Sarcophilus_harrisii
ENSAPEG00000001316	rpusd1	95	70.724	ENSSFOG00015014394	rpusd1	99	69.737	Scleropages_formosus
ENSAPEG00000001316	rpusd1	100	86.834	ENSSMAG00000008045	rpusd1	96	86.834	Scophthalmus_maximus
ENSAPEG00000001316	rpusd1	100	88.088	ENSSDUG00000001829	rpusd1	100	88.088	Seriola_dumerili
ENSAPEG00000001316	rpusd1	100	88.088	ENSSLDG00000020853	rpusd1	100	88.088	Seriola_lalandi_dorsalis
ENSAPEG00000001316	rpusd1	52	70.659	ENSSARG00000011187	-	100	70.659	Sorex_araneus
ENSAPEG00000001316	rpusd1	61	56.477	ENSSPUG00000005119	-	98	56.122	Sphenodon_punctatus
ENSAPEG00000001316	rpusd1	97	91.613	ENSSPAG00000012708	rpusd1	100	91.613	Stegastes_partitus
ENSAPEG00000001316	rpusd1	95	57.049	ENSSSCG00000008000	RPUSD1	98	65.748	Sus_scrofa
ENSAPEG00000001316	rpusd1	79	69.323	ENSTGUG00000015375	RPUSD1	99	69.323	Taeniopygia_guttata
ENSAPEG00000001316	rpusd1	97	80.323	ENSTRUG00000003041	rpusd1	99	80.323	Takifugu_rubripes
ENSAPEG00000001316	rpusd1	96	72.222	ENSTNIG00000002660	rpusd1	99	71.242	Tetraodon_nigroviridis
ENSAPEG00000001316	rpusd1	95	57.705	ENSTTRG00000010167	RPUSD1	98	57.705	Tursiops_truncatus
ENSAPEG00000001316	rpusd1	95	57.049	ENSUAMG00000012736	RPUSD1	98	57.377	Ursus_americanus
ENSAPEG00000001316	rpusd1	95	57.049	ENSUMAG00000021174	RPUSD1	91	64.822	Ursus_maritimus
ENSAPEG00000001316	rpusd1	95	57.705	ENSVVUG00000012357	RPUSD1	98	58.033	Vulpes_vulpes
ENSAPEG00000001316	rpusd1	95	63.158	ENSXETG00000007184	rpusd1	98	61.842	Xenopus_tropicalis
ENSAPEG00000001316	rpusd1	97	81.553	ENSXCOG00000017930	rpusd1	100	81.553	Xiphophorus_couchianus
ENSAPEG00000001316	rpusd1	97	81.877	ENSXMAG00000024084	rpusd1	100	81.877	Xiphophorus_maculatus