EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000001596 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 7954 bases
Position: chr10:329265-337218
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000002190	zf-C2H2	PF00096.26	2.5e-51	1	9
ENSAPEP00000002190	zf-C2H2	PF00096.26	2.5e-51	2	9
ENSAPEP00000002190	zf-C2H2	PF00096.26	2.5e-51	3	9
ENSAPEP00000002190	zf-C2H2	PF00096.26	2.5e-51	4	9
ENSAPEP00000002190	zf-C2H2	PF00096.26	2.5e-51	5	9
ENSAPEP00000002190	zf-C2H2	PF00096.26	2.5e-51	6	9
ENSAPEP00000002190	zf-C2H2	PF00096.26	2.5e-51	7	9
ENSAPEP00000002190	zf-C2H2	PF00096.26	2.5e-51	8	9
ENSAPEP00000002190	zf-C2H2	PF00096.26	2.5e-51	9	9
ENSAPEP00000002185	zf-C2H2	PF00096.26	3.5e-44	1	9
ENSAPEP00000002185	zf-C2H2	PF00096.26	3.5e-44	2	9
ENSAPEP00000002185	zf-C2H2	PF00096.26	3.5e-44	3	9
ENSAPEP00000002185	zf-C2H2	PF00096.26	3.5e-44	4	9
ENSAPEP00000002185	zf-C2H2	PF00096.26	3.5e-44	5	9
ENSAPEP00000002185	zf-C2H2	PF00096.26	3.5e-44	6	9
ENSAPEP00000002185	zf-C2H2	PF00096.26	3.5e-44	7	9
ENSAPEP00000002185	zf-C2H2	PF00096.26	3.5e-44	8	9
ENSAPEP00000002185	zf-C2H2	PF00096.26	3.5e-44	9	9
ENSAPEP00000002190	zf-met	PF12874.7	3.7e-08	1	1
ENSAPEP00000002185	zf-met	PF12874.7	1.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000002236	-	1284	-	ENSAPEP00000002185	427 (aa)	-	-
ENSAPET00000002241	-	3721	-	ENSAPEP00000002190	567 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000001596's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000001596's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000001596	-	73	40.777	ENSAPEG00000010478	-	52	40.000
ENSAPEG00000001596	-	74	36.996	ENSAPEG00000021575	-	61	38.057
ENSAPEG00000001596	-	70	39.731	ENSAPEG00000012599	-	94	39.731
ENSAPEG00000001596	-	75	37.175	ENSAPEG00000013097	-	74	37.197
ENSAPEG00000001596	-	78	35.741	ENSAPEG00000010013	-	60	38.073
ENSAPEG00000001596	-	83	32.895	ENSAPEG00000001546	-	88	51.095
ENSAPEG00000001596	-	72	46.939	ENSAPEG00000006358	znf341	50	32.778
ENSAPEG00000001596	-	80	47.826	ENSAPEG00000018316	-	58	47.826
ENSAPEG00000001596	-	69	39.474	ENSAPEG00000022558	scrt2	60	39.474
ENSAPEG00000001596	-	92	52.703	ENSAPEG00000006650	-	96	43.425
ENSAPEG00000001596	-	76	46.875	ENSAPEG00000009997	-	89	44.048
ENSAPEG00000001596	-	93	48.259	ENSAPEG00000008020	-	98	50.633
ENSAPEG00000001596	-	74	44.872	ENSAPEG00000020501	-	64	44.872
ENSAPEG00000001596	-	85	45.238	ENSAPEG00000011635	-	82	43.846
ENSAPEG00000001596	-	73	41.121	ENSAPEG00000007647	-	68	41.121
ENSAPEG00000001596	-	70	44.944	ENSAPEG00000013113	-	50	44.271
ENSAPEG00000001596	-	91	49.457	ENSAPEG00000007389	-	99	49.405
ENSAPEG00000001596	-	94	32.620	ENSAPEG00000006034	znf131	57	31.707
ENSAPEG00000001596	-	70	38.060	ENSAPEG00000002983	snai2	54	37.956
ENSAPEG00000001596	-	72	41.880	ENSAPEG00000002558	-	90	41.880
ENSAPEG00000001596	-	80	32.189	ENSAPEG00000003528	zbtb41	66	31.319
ENSAPEG00000001596	-	84	35.650	ENSAPEG00000018460	-	77	36.340
ENSAPEG00000001596	-	76	45.977	ENSAPEG00000008746	-	63	45.977
ENSAPEG00000001596	-	84	46.497	ENSAPEG00000007141	-	65	48.035
ENSAPEG00000001596	-	79	47.778	ENSAPEG00000014415	-	87	48.780
ENSAPEG00000001596	-	74	32.806	ENSAPEG00000016305	PRDM15	53	32.806
ENSAPEG00000001596	-	75	41.993	ENSAPEG00000016483	-	57	41.993
ENSAPEG00000001596	-	75	37.572	ENSAPEG00000022774	-	90	37.572
ENSAPEG00000001596	-	79	47.059	ENSAPEG00000016118	-	97	44.670
ENSAPEG00000001596	-	82	40.000	ENSAPEG00000009515	-	87	43.506
ENSAPEG00000001596	-	74	43.868	ENSAPEG00000012443	-	61	43.868
ENSAPEG00000001596	-	75	35.874	ENSAPEG00000007889	-	86	35.874
ENSAPEG00000001596	-	73	37.818	ENSAPEG00000005678	-	68	37.121
ENSAPEG00000001596	-	82	39.394	ENSAPEG00000005677	-	62	40.000
ENSAPEG00000001596	-	77	44.262	ENSAPEG00000002585	-	93	44.262
ENSAPEG00000001596	-	74	43.125	ENSAPEG00000016196	gfi1b	76	43.125
ENSAPEG00000001596	-	72	44.828	ENSAPEG00000018796	-	77	44.828
ENSAPEG00000001596	-	70	46.358	ENSAPEG00000011646	-	51	46.358
ENSAPEG00000001596	-	80	37.406	ENSAPEG00000016601	-	94	38.567
ENSAPEG00000001596	-	73	43.103	ENSAPEG00000010602	-	85	39.594
ENSAPEG00000001596	-	70	49.425	ENSAPEG00000004256	-	75	49.425
ENSAPEG00000001596	-	79	41.872	ENSAPEG00000004427	si:ch73-144d13.7	99	40.079
ENSAPEG00000001596	-	72	39.801	ENSAPEG00000012963	-	71	39.322
ENSAPEG00000001596	-	72	46.078	ENSAPEG00000014777	-	51	46.078
ENSAPEG00000001596	-	80	47.826	ENSAPEG00000018332	-	61	47.826
ENSAPEG00000001596	-	86	40.881	ENSAPEG00000012470	-	66	40.997
ENSAPEG00000001596	-	76	32.044	ENSAPEG00000015714	-	92	32.308
ENSAPEG00000001596	-	85	35.545	ENSAPEG00000018271	-	67	35.545
ENSAPEG00000001596	-	70	43.455	ENSAPEG00000012229	-	55	42.654
ENSAPEG00000001596	-	71	60.000	ENSAPEG00000012583	-	100	60.000
ENSAPEG00000001596	-	95	40.265	ENSAPEG00000018762	-	57	40.265
ENSAPEG00000001596	-	76	39.502	ENSAPEG00000013088	-	90	37.079
ENSAPEG00000001596	-	94	43.210	ENSAPEG00000013550	-	99	44.444
ENSAPEG00000001596	-	72	52.518	ENSAPEG00000015310	-	55	44.444
ENSAPEG00000001596	-	77	43.836	ENSAPEG00000019755	-	100	34.818
ENSAPEG00000001596	-	74	38.397	ENSAPEG00000022756	-	53	38.397
ENSAPEG00000001596	-	71	47.594	ENSAPEG00000006584	-	53	47.594
ENSAPEG00000001596	-	71	43.145	ENSAPEG00000009533	-	72	43.145
ENSAPEG00000001596	-	75	36.207	ENSAPEG00000013333	-	80	36.522
ENSAPEG00000001596	-	79	35.027	ENSAPEG00000000344	znf319b	86	34.817
ENSAPEG00000001596	-	80	39.914	ENSAPEG00000012217	-	66	40.693
ENSAPEG00000001596	-	81	35.321	ENSAPEG00000016462	-	72	35.321
ENSAPEG00000001596	-	76	43.678	ENSAPEG00000010438	-	98	46.311
ENSAPEG00000001596	-	80	48.175	ENSAPEG00000014848	-	100	48.634
ENSAPEG00000001596	-	77	35.202	ENSAPEG00000018471	-	77	35.202
ENSAPEG00000001596	-	85	48.000	ENSAPEG00000013585	-	84	41.818
ENSAPEG00000001596	-	74	43.787	ENSAPEG00000009826	-	98	42.029
ENSAPEG00000001596	-	71	39.823	ENSAPEG00000007175	-	55	39.823
ENSAPEG00000001596	-	79	35.294	ENSAPEG00000022511	si:ch211-216l23.1	97	35.821
ENSAPEG00000001596	-	76	49.143	ENSAPEG00000004486	-	99	46.309
ENSAPEG00000001596	-	71	38.486	ENSAPEG00000012243	-	74	38.486
ENSAPEG00000001596	-	84	38.500	ENSAPEG00000007910	-	51	38.500
ENSAPEG00000001596	-	76	34.278	ENSAPEG00000001556	-	70	37.549
ENSAPEG00000001596	-	80	35.440	ENSAPEG00000000208	ZNF319	94	35.948
ENSAPEG00000001596	-	71	33.508	ENSAPEG00000002011	hinfp	70	31.319
ENSAPEG00000001596	-	77	31.250	ENSAPEG00000018323	-	90	31.250
ENSAPEG00000001596	-	72	45.972	ENSAPEG00000015337	-	96	42.761
ENSAPEG00000001596	-	74	33.721	ENSAPEG00000006427	znf646	87	33.721
ENSAPEG00000001596	-	77	48.182	ENSAPEG00000005462	-	92	46.154
ENSAPEG00000001596	-	76	44.560	ENSAPEG00000009553	-	53	44.560
ENSAPEG00000001596	-	79	41.126	ENSAPEG00000013105	-	55	41.126
ENSAPEG00000001596	-	79	38.488	ENSAPEG00000012236	-	66	37.093
ENSAPEG00000001596	-	93	46.119	ENSAPEG00000011020	-	99	48.031
ENSAPEG00000001596	-	71	48.469	ENSAPEG00000015593	-	76	47.514
ENSAPEG00000001596	-	75	40.659	ENSAPEG00000013048	-	86	40.659
ENSAPEG00000001596	-	75	38.929	ENSAPEG00000012926	-	76	44.118
ENSAPEG00000001596	-	71	45.411	ENSAPEG00000017116	-	63	45.411
ENSAPEG00000001596	-	73	45.312	ENSAPEG00000002661	-	91	45.312
ENSAPEG00000001596	-	86	44.898	ENSAPEG00000013031	-	91	43.960
ENSAPEG00000001596	-	74	32.646	ENSAPEG00000016846	prdm5	73	31.987
ENSAPEG00000001596	-	71	48.770	ENSAPEG00000016536	-	86	48.770
ENSAPEG00000001596	-	72	48.387	ENSAPEG00000009383	-	86	48.387
ENSAPEG00000001596	-	75	48.168	ENSAPEG00000009381	-	57	46.850
ENSAPEG00000001596	-	69	40.909	ENSAPEG00000000869	scrt1b	59	40.909
ENSAPEG00000001596	-	89	43.137	ENSAPEG00000019026	znf236	79	38.679
ENSAPEG00000001596	-	78	40.129	ENSAPEG00000002888	-	93	40.711
ENSAPEG00000001596	-	81	36.508	ENSAPEG00000019527	-	64	36.508
ENSAPEG00000001596	-	74	39.869	ENSAPEG00000019106	-	58	39.085
ENSAPEG00000001596	-	75	54.015	ENSAPEG00000009190	-	97	38.944
ENSAPEG00000001596	-	71	43.182	ENSAPEG00000003893	-	65	43.182
ENSAPEG00000001596	-	74	51.531	ENSAPEG00000003892	-	54	51.531
ENSAPEG00000001596	-	71	47.667	ENSAPEG00000009835	-	95	47.667
ENSAPEG00000001596	-	85	46.154	ENSAPEG00000005566	-	57	46.154
ENSAPEG00000001596	-	75	30.696	ENSAPEG00000007719	si:dkey-89b17.4	98	34.483
ENSAPEG00000001596	-	74	39.850	ENSAPEG00000013044	-	58	41.732
ENSAPEG00000001596	-	87	30.570	ENSAPEG00000013354	patz1	53	32.317
ENSAPEG00000001596	-	77	45.455	ENSAPEG00000004189	-	82	44.944
ENSAPEG00000001596	-	68	30.894	ENSAPEG00000018919	znf407	62	30.894

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000001596	-	76	40.283	ENSAPOG00000013511	-	53	40.336	Acanthochromis_polyacanthus
ENSAPEG00000001596	-	82	95.662	ENSAPOG00000004328	-	98	95.662	Acanthochromis_polyacanthus
ENSAPEG00000001596	-	75	36.593	ENSACIG00000010739	-	79	36.593	Amphilophus_citrinellus
ENSAPEG00000001596	-	81	100.000	ENSAOCG00000007045	-	93	100.000	Amphiprion_ocellaris
ENSAPEG00000001596	-	81	87.991	ENSATEG00000006085	-	91	87.991	Anabas_testudineus
ENSAPEG00000001596	-	73	45.485	ENSACAG00000000082	-	99	47.857	Anolis_carolinensis
ENSAPEG00000001596	-	73	44.388	ENSACAG00000025537	-	100	46.121	Anolis_carolinensis
ENSAPEG00000001596	-	75	44.728	ENSAMXG00000032237	-	96	44.728	Astyanax_mexicanus
ENSAPEG00000001596	-	74	48.302	ENSAMXG00000035949	-	86	48.302	Astyanax_mexicanus
ENSAPEG00000001596	-	78	49.704	ENSAMXG00000012873	-	96	49.704	Astyanax_mexicanus
ENSAPEG00000001596	-	71	45.118	ENSAMXG00000026143	-	97	45.118	Astyanax_mexicanus
ENSAPEG00000001596	-	76	46.512	ENSAMXG00000033013	-	87	46.203	Astyanax_mexicanus
ENSAPEG00000001596	-	79	42.991	ENSAMXG00000035145	-	78	42.991	Astyanax_mexicanus
ENSAPEG00000001596	-	70	47.619	ENSAMXG00000036257	-	95	45.850	Astyanax_mexicanus
ENSAPEG00000001596	-	80	77.902	ENSCVAG00000011235	-	96	76.190	Cyprinodon_variegatus
ENSAPEG00000001596	-	76	39.077	ENSELUG00000013844	-	84	33.696	Esox_lucius
ENSAPEG00000001596	-	74	42.222	ENSELUG00000013357	-	84	42.222	Esox_lucius
ENSAPEG00000001596	-	77	38.835	ENSELUG00000021287	-	79	40.753	Esox_lucius
ENSAPEG00000001596	-	76	40.569	ENSFHEG00000019915	-	77	40.569	Fundulus_heteroclitus
ENSAPEG00000001596	-	76	43.103	ENSGMOG00000003238	-	100	43.103	Gadus_morhua
ENSAPEG00000001596	-	87	39.936	ENSGAFG00000003150	-	75	51.020	Gambusia_affinis
ENSAPEG00000001596	-	81	78.821	ENSGAFG00000012977	-	96	78.821	Gambusia_affinis
ENSAPEG00000001596	-	74	47.980	ENSIPUG00000021556	-	91	47.980	Ictalurus_punctatus
ENSAPEG00000001596	-	78	47.150	ENSIPUG00000004428	-	72	47.150	Ictalurus_punctatus
ENSAPEG00000001596	-	83	42.195	ENSIPUG00000006916	-	94	42.195	Ictalurus_punctatus
ENSAPEG00000001596	-	81	80.472	ENSKMAG00000004988	-	97	80.472	Kryptolebias_marmoratus
ENSAPEG00000001596	-	82	46.711	ENSLOCG00000014366	-	94	46.711	Lepisosteus_oculatus
ENSAPEG00000001596	-	79	37.410	ENSLOCG00000014144	-	100	47.590	Lepisosteus_oculatus
ENSAPEG00000001596	-	83	42.349	ENSMAMG00000016542	-	67	40.989	Mastacembelus_armatus
ENSAPEG00000001596	-	81	88.646	ENSMAMG00000019301	-	96	88.646	Mastacembelus_armatus
ENSAPEG00000001596	-	73	39.752	ENSMMOG00000009852	-	98	37.748	Mola_mola
ENSAPEG00000001596	-	78	41.637	ENSMALG00000005554	-	89	43.478	Monopterus_albus
ENSAPEG00000001596	-	71	35.979	ENSOCUG00000005876	-	100	41.880	Oryctolagus_cuniculus
ENSAPEG00000001596	-	73	45.596	ENSPKIG00000006616	-	58	45.596	Paramormyrops_kingsleyae
ENSAPEG00000001596	-	77	37.688	ENSPMGG00000017633	-	92	37.688	Periophthalmus_magnuspinnatus
ENSAPEG00000001596	-	81	78.821	ENSPFOG00000010682	-	96	78.821	Poecilia_formosa
ENSAPEG00000001596	-	87	35.842	ENSPLAG00000002892	-	83	35.842	Poecilia_latipinna
ENSAPEG00000001596	-	81	79.258	ENSPMEG00000001399	-	96	79.258	Poecilia_mexicana
ENSAPEG00000001596	-	90	37.190	ENSPREG00000002582	-	81	39.175	Poecilia_reticulata
ENSAPEG00000001596	-	81	79.039	ENSPREG00000001386	-	96	79.039	Poecilia_reticulata
ENSAPEG00000001596	-	76	46.988	ENSPNAG00000015116	-	90	45.909	Pygocentrus_nattereri
ENSAPEG00000001596	-	71	43.366	ENSPNAG00000000219	-	87	42.969	Pygocentrus_nattereri
ENSAPEG00000001596	-	76	37.966	ENSPNAG00000025570	-	81	38.529	Pygocentrus_nattereri
ENSAPEG00000001596	-	79	42.857	ENSSFOG00015006108	-	67	41.600	Scleropages_formosus
ENSAPEG00000001596	-	88	45.405	ENSSMAG00000009115	-	96	51.020	Scophthalmus_maximus
ENSAPEG00000001596	-	83	42.349	ENSSDUG00000002195	-	86	49.462	Seriola_dumerili
ENSAPEG00000001596	-	81	88.865	ENSSDUG00000006463	-	96	88.865	Seriola_dumerili
ENSAPEG00000001596	-	83	44.595	ENSSLDG00000020727	-	97	39.437	Seriola_lalandi_dorsalis
ENSAPEG00000001596	-	81	87.991	ENSSLDG00000006724	-	89	87.991	Seriola_lalandi_dorsalis
ENSAPEG00000001596	-	85	37.500	ENSSPAG00000012960	-	97	37.500	Stegastes_partitus
ENSAPEG00000001596	-	89	40.449	ENSSPAG00000021008	-	96	44.944	Stegastes_partitus
ENSAPEG00000001596	-	78	39.427	ENSTRUG00000021675	-	88	37.500	Takifugu_rubripes
ENSAPEG00000001596	-	81	39.764	ENSTRUG00000005321	-	99	38.177	Takifugu_rubripes
ENSAPEG00000001596	-	76	46.914	ENSTNIG00000000320	-	98	46.914	Tetraodon_nigroviridis
ENSAPEG00000001596	-	75	41.622	ENSTNIG00000008200	-	100	42.795	Tetraodon_nigroviridis
ENSAPEG00000001596	-	74	47.596	ENSXETG00000006575	znf420	81	45.513	Xenopus_tropicalis
ENSAPEG00000001596	-	78	40.559	ENSXCOG00000009665	-	94	45.349	Xiphophorus_couchianus
ENSAPEG00000001596	-	81	79.039	ENSXMAG00000028625	-	96	79.039	Xiphophorus_maculatus