EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000001641 (Gene tree)
Gene ID: -
Gene Symbol: opa1
Alias: fk62d06|wu:fb77a10|wu:fk62d06|zgc:92092
Full Name: optic atrophy 1 (autosomal dominant)
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 39527 bases
Position: chr2:16256829-16296355
Accession: ZDB-GENE-041114-7
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000002409	MMR_HSR1	PF01926.23	3.4e-05	1	1
ENSAPEP00000002379	MMR_HSR1	PF01926.23	3.5e-05	1	1
ENSAPEP00000002370	MMR_HSR1	PF01926.23	3.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000002427	-	5207	-	ENSAPEP00000002370	984 (aa)	-	-
ENSAPET00000002436	-	5153	-	ENSAPEP00000002379	966 (aa)	-	-
ENSAPET00000002465	-	2769	-	ENSAPEP00000002409	922 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000001641's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000001641's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000001641	opa1	100	99.085	ENSAPOG00000011980	opa1	100	99.085	Acanthochromis_polyacanthus
ENSAPEG00000001641	opa1	99	92.733	ENSACIG00000012521	opa1	98	92.733	Amphilophus_citrinellus
ENSAPEG00000001641	opa1	100	99.898	ENSAOCG00000020559	opa1	100	99.898	Amphiprion_ocellaris
ENSAPEG00000001641	opa1	100	91.116	ENSAMXG00000012295	opa1	100	90.806	Astyanax_mexicanus
ENSAPEG00000001641	opa1	92	51.469	WBGene00001134	eat-3	90	52.841	Caenorhabditis_elegans
ENSAPEG00000001641	opa1	99	85.453	ENSCSEG00000014266	opa1	98	85.453	Cynoglossus_semilaevis
ENSAPEG00000001641	opa1	97	94.134	ENSCVAG00000002438	opa1	100	90.698	Cyprinodon_variegatus
ENSAPEG00000001641	opa1	100	90.806	ENSDARG00000070801	opa1	100	90.496	Danio_rerio
ENSAPEG00000001641	opa1	93	54.767	FBgn0261276	Opa1	90	55.504	Drosophila_melanogaster
ENSAPEG00000001641	opa1	97	88.975	ENSFHEG00000003616	opa1	97	96.496	Fundulus_heteroclitus
ENSAPEG00000001641	opa1	100	95.859	ENSGACG00000009278	opa1	100	95.859	Gasterosteus_aculeatus
ENSAPEG00000001641	opa1	98	95.137	ENSHBUG00000005897	opa1	100	95.137	Haplochromis_burtoni
ENSAPEG00000001641	opa1	100	93.902	ENSHCOG00000016756	opa1	98	93.801	Hippocampus_comes
ENSAPEG00000001641	opa1	80	92.819	ENSKMAG00000009415	opa1	94	95.929	Kryptolebias_marmoratus
ENSAPEG00000001641	opa1	97	88.842	ENSMMOG00000008891	opa1	98	88.629	Mola_mola
ENSAPEG00000001641	opa1	100	93.902	ENSMALG00000016968	opa1	100	93.902	Monopterus_albus
ENSAPEG00000001641	opa1	99	91.640	ENSNBRG00000020394	opa1	100	91.640	Neolamprologus_brichardi
ENSAPEG00000001641	opa1	97	89.495	ENSPKIG00000003379	opa1	100	83.537	Paramormyrops_kingsleyae
ENSAPEG00000001641	opa1	100	77.403	ENSPKIG00000006473	OPA1	99	77.198	Paramormyrops_kingsleyae
ENSAPEG00000001641	opa1	99	91.883	ENSPNYG00000021747	opa1	99	91.883	Pundamilia_nyererei
ENSAPEG00000001641	opa1	100	91.012	ENSPNAG00000001917	opa1	100	90.702	Pygocentrus_nattereri
ENSAPEG00000001641	opa1	97	81.551	ENSSFOG00015009303	OPA1	97	80.962	Scleropages_formosus
ENSAPEG00000001641	opa1	97	90.568	ENSSMAG00000001797	opa1	96	92.559	Scophthalmus_maximus
ENSAPEG00000001641	opa1	73	95.074	ENSSDUG00000004968	opa1	99	95.074	Seriola_dumerili
ENSAPEG00000001641	opa1	98	95.368	ENSSLDG00000011089	opa1	100	91.602	Seriola_lalandi_dorsalis
ENSAPEG00000001641	opa1	100	98.476	ENSSPAG00000018388	opa1	100	98.476	Stegastes_partitus
ENSAPEG00000001641	opa1	78	92.857	ENSXCOG00000003267	opa1	92	91.931	Xiphophorus_couchianus
ENSAPEG00000001641	opa1	77	94.370	ENSXMAG00000005593	opa1	99	95.000	Xiphophorus_maculatus