EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000001673 (Gene tree)
Gene ID: -
Gene Symbol: rad54b
Alias: im:7137737|im:7153525
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 23537 bases
Position: chr7:34066079-34089615
Accession: ZDB-GENE-060810-50
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000002349	ResIII	PF04851.15	1.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000002406	-	2589	-	ENSAPEP00000002349	862 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000001673's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000001673's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000001673	rad54b	65	47.487	ENSAPEG00000020658	rad54l	76	47.312
ENSAPEG00000001673	rad54b	63	32.712	ENSAPEG00000022533	ERCC6L	54	32.030
ENSAPEG00000001673	rad54b	58	33.465	ENSAPEG00000011117	smarca5	50	33.049

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000001673	rad54b	99	55.240	ENSG00000197275	RAD54B	99	55.131	Homo_sapiens
ENSAPEG00000001673	rad54b	82	58.607	ENSG00000265817	FSBP	99	58.470	Homo_sapiens
ENSAPEG00000001673	rad54b	99	55.157	ENSAMEG00000005834	-	99	55.049	Ailuropoda_melanoleuca
ENSAPEG00000001673	rad54b	100	80.294	ENSACIG00000013005	rad54b	100	80.294	Amphilophus_citrinellus
ENSAPEG00000001673	rad54b	100	86.378	ENSAOCG00000008523	rad54b	100	86.378	Amphiprion_ocellaris
ENSAPEG00000001673	rad54b	100	81.072	ENSATEG00000001527	rad54b	100	81.072	Anabas_testudineus
ENSAPEG00000001673	rad54b	99	55.991	ENSAPLG00000014366	-	99	55.991	Anas_platyrhynchos
ENSAPEG00000001673	rad54b	89	58.786	ENSACAG00000003671	-	98	58.786	Anolis_carolinensis
ENSAPEG00000001673	rad54b	74	60.802	ENSANAG00000019528	-	99	60.648	Aotus_nancymaae
ENSAPEG00000001673	rad54b	100	80.543	ENSACLG00000007826	rad54b	100	80.204	Astatotilapia_calliptera
ENSAPEG00000001673	rad54b	89	65.565	ENSAMXG00000039985	rad54b	94	65.278	Astyanax_mexicanus
ENSAPEG00000001673	rad54b	99	55.195	ENSBTAG00000000632	RAD54B	99	55.087	Bos_taurus
ENSAPEG00000001673	rad54b	63	39.854	WBGene00013792	Y116A8C.13	70	39.963	Caenorhabditis_elegans
ENSAPEG00000001673	rad54b	99	55.677	ENSCJAG00000000080	-	99	58.550	Callithrix_jacchus
ENSAPEG00000001673	rad54b	99	55.786	ENSCAFG00000009179	RAD54B	99	55.628	Canis_familiaris
ENSAPEG00000001673	rad54b	99	56.004	ENSCAFG00020012084	-	99	55.847	Canis_lupus_dingo
ENSAPEG00000001673	rad54b	99	54.870	ENSCHIG00000008230	-	99	54.762	Capra_hircus
ENSAPEG00000001673	rad54b	99	55.434	ENSTSYG00000013234	-	99	55.324	Carlito_syrichta
ENSAPEG00000001673	rad54b	99	55.237	ENSCPOG00000011643	-	99	55.127	Cavia_porcellus
ENSAPEG00000001673	rad54b	99	55.459	ENSCCAG00000011754	-	99	58.276	Cebus_capucinus
ENSAPEG00000001673	rad54b	99	54.945	ENSCATG00000030661	-	99	58.069	Cercocebus_atys
ENSAPEG00000001673	rad54b	99	55.357	ENSCLAG00000010476	-	99	55.357	Chinchilla_lanigera
ENSAPEG00000001673	rad54b	99	55.044	ENSCSAG00000012712	-	99	54.934	Chlorocebus_sabaeus
ENSAPEG00000001673	rad54b	99	56.695	ENSCPBG00000003204	-	98	58.442	Chrysemys_picta_bellii
ENSAPEG00000001673	rad54b	99	55.055	ENSCANG00000017939	-	99	58.207	Colobus_angolensis_palliatus
ENSAPEG00000001673	rad54b	99	54.343	ENSCGRG00001020184	Rad54b	99	54.343	Cricetulus_griseus_chok1gshd
ENSAPEG00000001673	rad54b	99	53.289	ENSCGRG00000016752	Rad54b	99	53.289	Cricetulus_griseus_crigri
ENSAPEG00000001673	rad54b	99	76.397	ENSCSEG00000001601	rad54b	99	76.223	Cynoglossus_semilaevis
ENSAPEG00000001673	rad54b	100	78.668	ENSCVAG00000009200	rad54b	100	78.668	Cyprinodon_variegatus
ENSAPEG00000001673	rad54b	99	62.916	ENSDARG00000092134	rad54b	99	67.863	Danio_rerio
ENSAPEG00000001673	rad54b	99	54.715	ENSDNOG00000015535	-	99	54.715	Dasypus_novemcinctus
ENSAPEG00000001673	rad54b	99	55.568	ENSDORG00000002492	Rad54b	99	55.906	Dipodomys_ordii
ENSAPEG00000001673	rad54b	86	57.503	ENSETEG00000010605	-	100	57.503	Echinops_telfairi
ENSAPEG00000001673	rad54b	99	48.132	ENSEBUG00000009104	rad54b	98	48.079	Eptatretus_burgeri
ENSAPEG00000001673	rad54b	89	58.186	ENSEASG00005004021	-	88	58.629	Equus_asinus_asinus
ENSAPEG00000001673	rad54b	99	54.258	ENSECAG00000021949	-	98	54.615	Equus_caballus
ENSAPEG00000001673	rad54b	84	52.761	ENSEEUG00000008056	-	72	50.932	Erinaceus_europaeus
ENSAPEG00000001673	rad54b	100	67.983	ENSELUG00000009287	rad54b	100	67.769	Esox_lucius
ENSAPEG00000001673	rad54b	99	55.664	ENSFCAG00000015513	-	99	59.072	Felis_catus
ENSAPEG00000001673	rad54b	99	56.441	ENSFALG00000005467	-	99	56.441	Ficedula_albicollis
ENSAPEG00000001673	rad54b	99	55.373	ENSFDAG00000020541	-	100	55.263	Fukomys_damarensis
ENSAPEG00000001673	rad54b	91	78.025	ENSFHEG00000014382	rad54b	89	78.025	Fundulus_heteroclitus
ENSAPEG00000001673	rad54b	89	78.409	ENSGMOG00000014774	rad54b	99	78.030	Gadus_morhua
ENSAPEG00000001673	rad54b	99	56.503	ENSGALG00000043597	RAD54B	99	56.441	Gallus_gallus
ENSAPEG00000001673	rad54b	99	77.929	ENSGAFG00000007901	rad54b	99	77.929	Gambusia_affinis
ENSAPEG00000001673	rad54b	99	76.170	ENSGACG00000009128	rad54b	99	76.170	Gasterosteus_aculeatus
ENSAPEG00000001673	rad54b	99	56.941	ENSGAGG00000018747	-	99	56.941	Gopherus_agassizii
ENSAPEG00000001673	rad54b	99	54.874	ENSGGOG00000023516	-	99	54.765	Gorilla_gorilla
ENSAPEG00000001673	rad54b	99	77.063	ENSHBUG00000016017	rad54b	99	77.063	Haplochromis_burtoni
ENSAPEG00000001673	rad54b	99	53.645	ENSHGLG00000008263	RAD54B	99	53.863	Heterocephalus_glaber_female
ENSAPEG00000001673	rad54b	99	53.081	ENSHGLG00100008108	-	99	53.297	Heterocephalus_glaber_male
ENSAPEG00000001673	rad54b	99	71.254	ENSHCOG00000004764	rad54b	98	75.000	Hippocampus_comes
ENSAPEG00000001673	rad54b	99	59.574	ENSIPUG00000018531	rad54b	99	59.362	Ictalurus_punctatus
ENSAPEG00000001673	rad54b	99	54.245	ENSSTOG00000010791	-	99	54.024	Ictidomys_tridecemlineatus
ENSAPEG00000001673	rad54b	99	53.166	ENSJJAG00000010314	Rad54b	99	53.166	Jaculus_jaculus
ENSAPEG00000001673	rad54b	100	75.626	ENSKMAG00000004744	rad54b	100	75.599	Kryptolebias_marmoratus
ENSAPEG00000001673	rad54b	84	62.933	ENSLACG00000000859	-	100	62.933	Latimeria_chalumnae
ENSAPEG00000001673	rad54b	99	61.464	ENSLOCG00000010100	rad54b	99	61.572	Lepisosteus_oculatus
ENSAPEG00000001673	rad54b	89	57.305	ENSLAFG00000015315	-	97	57.305	Loxodonta_africana
ENSAPEG00000001673	rad54b	99	54.945	ENSMFAG00000031629	-	99	58.207	Macaca_fascicularis
ENSAPEG00000001673	rad54b	99	54.945	ENSMMUG00000005659	-	99	54.835	Macaca_mulatta
ENSAPEG00000001673	rad54b	99	54.895	ENSMNEG00000016408	-	99	54.785	Macaca_nemestrina
ENSAPEG00000001673	rad54b	99	54.835	ENSMLEG00000006946	-	99	54.725	Mandrillus_leucophaeus
ENSAPEG00000001673	rad54b	100	78.853	ENSMAMG00000012269	rad54b	99	78.198	Mastacembelus_armatus
ENSAPEG00000001673	rad54b	100	77.005	ENSMZEG00005005281	rad54b	96	83.499	Maylandia_zebra
ENSAPEG00000001673	rad54b	99	55.895	ENSMGAG00000012024	-	99	55.834	Meleagris_gallopavo
ENSAPEG00000001673	rad54b	99	54.433	ENSMAUG00000013586	Rad54b	99	54.433	Mesocricetus_auratus
ENSAPEG00000001673	rad54b	99	55.141	ENSMICG00000000754	-	99	55.028	Microcebus_murinus
ENSAPEG00000001673	rad54b	99	54.321	ENSMOCG00000020035	Rad54b	99	54.097	Microtus_ochrogaster
ENSAPEG00000001673	rad54b	99	78.330	ENSMMOG00000003394	rad54b	99	78.330	Mola_mola
ENSAPEG00000001673	rad54b	89	59.016	ENSMODG00000007343	-	97	59.016	Monodelphis_domestica
ENSAPEG00000001673	rad54b	74	87.559	ENSMALG00000001520	rad54b	100	87.244	Monopterus_albus
ENSAPEG00000001673	rad54b	99	55.581	MGP_CAROLIEiJ_G0025810	Rad54b	99	55.581	Mus_caroli
ENSAPEG00000001673	rad54b	99	54.698	ENSMUSG00000078773	Rad54b	99	54.698	Mus_musculus
ENSAPEG00000001673	rad54b	99	55.045	MGP_PahariEiJ_G0023933	Rad54b	99	55.045	Mus_pahari
ENSAPEG00000001673	rad54b	99	55.543	MGP_SPRETEiJ_G0026758	Rad54b	99	55.543	Mus_spretus
ENSAPEG00000001673	rad54b	89	59.572	ENSMPUG00000008878	-	97	59.320	Mustela_putorius_furo
ENSAPEG00000001673	rad54b	99	54.934	ENSMLUG00000008953	-	99	55.093	Myotis_lucifugus
ENSAPEG00000001673	rad54b	99	54.386	ENSNGAG00000017537	Rad54b	99	54.386	Nannospalax_galili
ENSAPEG00000001673	rad54b	100	80.543	ENSNBRG00000013394	rad54b	100	80.204	Neolamprologus_brichardi
ENSAPEG00000001673	rad54b	99	54.476	ENSNLEG00000003062	-	99	57.787	Nomascus_leucogenys
ENSAPEG00000001673	rad54b	72	60.925	ENSMEUG00000012426	-	69	60.925	Notamacropus_eugenii
ENSAPEG00000001673	rad54b	99	55.470	ENSODEG00000019564	-	99	55.470	Octodon_degus
ENSAPEG00000001673	rad54b	79	75.000	ENSODEG00000002650	-	93	75.000	Octodon_degus
ENSAPEG00000001673	rad54b	100	78.261	ENSONIG00000006067	rad54b	100	78.261	Oreochromis_niloticus
ENSAPEG00000001673	rad54b	85	59.763	ENSOANG00000011348	-	99	59.524	Ornithorhynchus_anatinus
ENSAPEG00000001673	rad54b	99	54.863	ENSOCUG00000016478	-	99	54.645	Oryctolagus_cuniculus
ENSAPEG00000001673	rad54b	100	73.489	ENSORLG00000008918	rad54b	100	85.248	Oryzias_latipes
ENSAPEG00000001673	rad54b	74	85.093	ENSORLG00020012171	rad54b	100	85.093	Oryzias_latipes_hni
ENSAPEG00000001673	rad54b	100	73.093	ENSORLG00015018536	rad54b	100	72.987	Oryzias_latipes_hsok
ENSAPEG00000001673	rad54b	87	81.984	ENSOMEG00000004345	rad54b	100	81.984	Oryzias_melastigma
ENSAPEG00000001673	rad54b	99	54.276	ENSOGAG00000007854	-	99	54.167	Otolemur_garnettii
ENSAPEG00000001673	rad54b	92	58.528	ENSOARG00000007691	-	99	58.405	Ovis_aries
ENSAPEG00000001673	rad54b	99	53.603	ENSPPAG00000029572	-	99	53.493	Pan_paniscus
ENSAPEG00000001673	rad54b	99	55.556	ENSPPRG00000007571	-	99	59.072	Panthera_pardus
ENSAPEG00000001673	rad54b	82	59.209	ENSPTIG00000012670	-	99	59.072	Panthera_tigris_altaica
ENSAPEG00000001673	rad54b	99	54.694	ENSPTRG00000020427	-	99	57.787	Pan_troglodytes
ENSAPEG00000001673	rad54b	99	54.945	ENSPANG00000019566	-	99	54.835	Papio_anubis
ENSAPEG00000001673	rad54b	99	62.077	ENSPKIG00000014974	rad54b	99	61.858	Paramormyrops_kingsleyae
ENSAPEG00000001673	rad54b	99	56.000	ENSPSIG00000002383	-	96	60.831	Pelodiscus_sinensis
ENSAPEG00000001673	rad54b	99	54.556	ENSPEMG00000012133	Rad54b	99	54.454	Peromyscus_maniculatus_bairdii
ENSAPEG00000001673	rad54b	88	57.526	ENSPMAG00000002916	rad54b	98	57.888	Petromyzon_marinus
ENSAPEG00000001673	rad54b	89	59.155	ENSPCIG00000020151	-	92	59.155	Phascolarctos_cinereus
ENSAPEG00000001673	rad54b	99	75.080	ENSPFOG00000023411	rad54b	99	73.840	Poecilia_formosa
ENSAPEG00000001673	rad54b	99	74.547	ENSPLAG00000010430	rad54b	99	74.121	Poecilia_latipinna
ENSAPEG00000001673	rad54b	99	76.099	ENSPMEG00000016873	rad54b	99	76.099	Poecilia_mexicana
ENSAPEG00000001673	rad54b	99	78.192	ENSPREG00000018443	rad54b	99	78.192	Poecilia_reticulata
ENSAPEG00000001673	rad54b	99	54.585	ENSPPYG00000018750	-	99	54.476	Pongo_abelii
ENSAPEG00000001673	rad54b	99	54.923	ENSPCOG00000026845	-	99	58.299	Propithecus_coquereli
ENSAPEG00000001673	rad54b	84	58.008	ENSPVAG00000000261	-	86	57.873	Pteropus_vampyrus
ENSAPEG00000001673	rad54b	90	82.206	ENSPNYG00000018303	rad54b	97	82.206	Pundamilia_nyererei
ENSAPEG00000001673	rad54b	99	62.258	ENSPNAG00000000295	rad54b	99	62.258	Pygocentrus_nattereri
ENSAPEG00000001673	rad54b	99	55.269	ENSRNOG00000039949	Rad54b	99	55.269	Rattus_norvegicus
ENSAPEG00000001673	rad54b	99	54.725	ENSRBIG00000020419	-	99	54.615	Rhinopithecus_bieti
ENSAPEG00000001673	rad54b	99	54.725	ENSRROG00000039897	-	99	54.615	Rhinopithecus_roxellana
ENSAPEG00000001673	rad54b	65	41.951	YBR073W	RDH54	85	35.376	Saccharomyces_cerevisiae
ENSAPEG00000001673	rad54b	99	55.568	ENSSBOG00000028501	-	99	55.459	Saimiri_boliviensis_boliviensis
ENSAPEG00000001673	rad54b	99	54.863	ENSSHAG00000017038	-	99	54.754	Sarcophilus_harrisii
ENSAPEG00000001673	rad54b	65	71.454	ENSSFOG00015008483	rad54b	90	70.557	Scleropages_formosus
ENSAPEG00000001673	rad54b	99	76.844	ENSSMAG00000018659	rad54b	99	76.844	Scophthalmus_maximus
ENSAPEG00000001673	rad54b	97	76.496	ENSSDUG00000001122	rad54b	96	76.496	Seriola_dumerili
ENSAPEG00000001673	rad54b	100	76.923	ENSSLDG00000013787	rad54b	100	76.923	Seriola_lalandi_dorsalis
ENSAPEG00000001673	rad54b	99	58.501	ENSSPUG00000016497	-	99	58.501	Sphenodon_punctatus
ENSAPEG00000001673	rad54b	100	83.371	ENSSPAG00000012800	rad54b	100	83.371	Stegastes_partitus
ENSAPEG00000001673	rad54b	99	54.515	ENSSSCG00000006101	-	98	58.175	Sus_scrofa
ENSAPEG00000001673	rad54b	99	56.148	ENSTGUG00000011880	-	99	56.039	Taeniopygia_guttata
ENSAPEG00000001673	rad54b	100	72.234	ENSTRUG00000010015	rad54b	99	72.128	Takifugu_rubripes
ENSAPEG00000001673	rad54b	99	50.868	ENSTTRG00000006312	-	99	50.759	Tursiops_truncatus
ENSAPEG00000001673	rad54b	99	55.375	ENSUMAG00000016401	-	99	55.266	Ursus_maritimus
ENSAPEG00000001673	rad54b	99	54.367	ENSVPAG00000003157	-	99	54.258	Vicugna_pacos
ENSAPEG00000001673	rad54b	99	48.376	ENSXETG00000025924	rad54b	98	52.405	Xenopus_tropicalis
ENSAPEG00000001673	rad54b	99	78.231	ENSXMAG00000013141	rad54b	99	78.231	Xiphophorus_maculatus