EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000001966 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 25704 bases
Position: chr1:44488094-44513797
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000002825	RNA_pol_Rpb1_5	PF04998.17	9.4e-89	1	1
ENSAPEP00000002809	RNA_pol_Rpb1_5	PF04998.17	1.3e-88	1	1
ENSAPEP00000002825	RNA_pol_Rpb1_4	PF05000.17	8.5e-32	1	1
ENSAPEP00000002809	RNA_pol_Rpb1_4	PF05000.17	9e-32	1	1
ENSAPEP00000002825	RNA_pol_Rpb1_2	PF00623.20	1.4e-72	1	1
ENSAPEP00000002809	RNA_pol_Rpb1_2	PF00623.20	1.5e-72	1	1
ENSAPEP00000002825	RNA_pol_Rpb1_3	PF04983.18	7e-41	1	1
ENSAPEP00000002809	RNA_pol_Rpb1_3	PF04983.18	7.5e-41	1	1
ENSAPEP00000002825	RNA_pol_Rpb1_1	PF04997.12	1.6e-91	1	1
ENSAPEP00000002809	RNA_pol_Rpb1_1	PF04997.12	1.7e-91	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000002889	-	4931	-	ENSAPEP00000002825	1335 (aa)	-	-
ENSAPET00000002873	-	5096	-	ENSAPEP00000002809	1390 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000001966's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000001966's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000001966	-	100	99.784	ENSAPEG00000013351	polr3a	100	99.784
ENSAPEG00000001966	-	91	38.011	ENSAPEG00000012623	polr2a	68	38.251
ENSAPEG00000001966	-	73	32.799	ENSAPEG00000016105	polr1a	63	32.799

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000001966	-	100	90.360	ENSG00000148606	POLR3A	100	90.360	Homo_sapiens
ENSAPEG00000001966	-	64	95.587	ENSAPOG00000022727	polr3a	99	95.587	Acanthochromis_polyacanthus
ENSAPEG00000001966	-	100	90.165	ENSAMEG00000017801	POLR3A	100	90.165	Ailuropoda_melanoleuca
ENSAPEG00000001966	-	94	97.000	ENSACIG00000024504	polr3a	97	97.000	Amphilophus_citrinellus
ENSAPEG00000001966	-	100	99.784	ENSAOCG00000002071	polr3a	100	99.784	Amphiprion_ocellaris
ENSAPEG00000001966	-	100	96.403	ENSAOCG00000003949	-	100	96.403	Amphiprion_ocellaris
ENSAPEG00000001966	-	100	96.619	ENSATEG00000023277	polr3a	100	96.619	Anabas_testudineus
ENSAPEG00000001966	-	99	90.618	ENSAPLG00000015878	POLR3A	99	90.618	Anas_platyrhynchos
ENSAPEG00000001966	-	93	89.458	ENSACAG00000007985	POLR3A	99	89.458	Anolis_carolinensis
ENSAPEG00000001966	-	100	87.787	ENSANAG00000028922	POLR3A	96	92.357	Aotus_nancymaae
ENSAPEG00000001966	-	100	96.403	ENSACLG00000005914	polr3a	100	96.403	Astatotilapia_calliptera
ENSAPEG00000001966	-	100	89.065	ENSAMXG00000018852	polr3a	100	89.065	Astyanax_mexicanus
ENSAPEG00000001966	-	100	90.432	ENSBTAG00000013259	POLR3A	100	90.432	Bos_taurus
ENSAPEG00000001966	-	98	57.061	WBGene00004411	rpc-1	99	57.061	Caenorhabditis_elegans
ENSAPEG00000001966	-	100	90.144	ENSCJAG00000001015	POLR3A	100	90.144	Callithrix_jacchus
ENSAPEG00000001966	-	100	90.288	ENSCAFG00000015546	POLR3A	100	90.288	Canis_familiaris
ENSAPEG00000001966	-	100	90.288	ENSCAFG00020014711	POLR3A	100	90.288	Canis_lupus_dingo
ENSAPEG00000001966	-	100	90.000	ENSCHIG00000000352	POLR3A	100	90.000	Capra_hircus
ENSAPEG00000001966	-	100	89.928	ENSTSYG00000006671	POLR3A	100	89.928	Carlito_syrichta
ENSAPEG00000001966	-	99	89.673	ENSCAPG00000016031	POLR3A	100	89.673	Cavia_aperea
ENSAPEG00000001966	-	100	89.712	ENSCPOG00000022387	POLR3A	100	89.712	Cavia_porcellus
ENSAPEG00000001966	-	100	88.705	ENSCCAG00000032995	POLR3A	100	88.705	Cebus_capucinus
ENSAPEG00000001966	-	100	90.360	ENSCATG00000035842	POLR3A	100	90.360	Cercocebus_atys
ENSAPEG00000001966	-	100	90.000	ENSCLAG00000009629	POLR3A	100	90.000	Chinchilla_lanigera
ENSAPEG00000001966	-	100	90.360	ENSCSAG00000009292	POLR3A	100	90.360	Chlorocebus_sabaeus
ENSAPEG00000001966	-	81	82.468	ENSCHOG00000008368	POLR3A	95	82.468	Choloepus_hoffmanni
ENSAPEG00000001966	-	99	90.497	ENSCPBG00000002079	POLR3A	99	90.497	Chrysemys_picta_bellii
ENSAPEG00000001966	-	99	68.948	ENSCSAVG00000009925	-	99	68.948	Ciona_savignyi
ENSAPEG00000001966	-	86	86.245	ENSCANG00000041071	POLR3A	98	91.139	Colobus_angolensis_palliatus
ENSAPEG00000001966	-	78	90.743	ENSCGRG00001015599	-	92	90.743	Cricetulus_griseus_chok1gshd
ENSAPEG00000001966	-	88	89.638	ENSCGRG00000001019	Polr3a	100	89.638	Cricetulus_griseus_crigri
ENSAPEG00000001966	-	100	95.755	ENSCSEG00000016653	polr3a	100	95.755	Cynoglossus_semilaevis
ENSAPEG00000001966	-	100	95.396	ENSCVAG00000023049	polr3a	100	95.396	Cyprinodon_variegatus
ENSAPEG00000001966	-	99	91.715	ENSDARG00000102569	polr3a	99	91.715	Danio_rerio
ENSAPEG00000001966	-	100	89.424	ENSDNOG00000010194	POLR3A	100	89.424	Dasypus_novemcinctus
ENSAPEG00000001966	-	100	90.360	ENSDORG00000000184	Polr3a	100	90.360	Dipodomys_ordii
ENSAPEG00000001966	-	99	56.729	FBgn0030687	CG17209	99	56.729	Drosophila_melanogaster
ENSAPEG00000001966	-	88	89.879	ENSETEG00000007477	POLR3A	89	89.879	Echinops_telfairi
ENSAPEG00000001966	-	61	75.967	ENSEBUG00000013761	polr3a	98	75.967	Eptatretus_burgeri
ENSAPEG00000001966	-	100	90.360	ENSEASG00005023053	POLR3A	100	90.360	Equus_asinus_asinus
ENSAPEG00000001966	-	97	90.387	ENSECAG00000019416	POLR3A	100	90.187	Equus_caballus
ENSAPEG00000001966	-	96	85.757	ENSEEUG00000001774	POLR3A	100	85.757	Erinaceus_europaeus
ENSAPEG00000001966	-	100	91.098	ENSELUG00000014016	polr3a	100	91.098	Esox_lucius
ENSAPEG00000001966	-	100	90.504	ENSFCAG00000000843	POLR3A	100	90.504	Felis_catus
ENSAPEG00000001966	-	100	90.367	ENSFALG00000006913	POLR3A	100	90.367	Ficedula_albicollis
ENSAPEG00000001966	-	100	89.784	ENSFDAG00000007813	POLR3A	100	89.784	Fukomys_damarensis
ENSAPEG00000001966	-	95	95.263	ENSFHEG00000011922	polr3a	99	95.263	Fundulus_heteroclitus
ENSAPEG00000001966	-	100	87.932	ENSGMOG00000000291	polr3a	99	87.932	Gadus_morhua
ENSAPEG00000001966	-	100	90.791	ENSGALG00000004947	POLR3A	100	90.791	Gallus_gallus
ENSAPEG00000001966	-	100	95.324	ENSGAFG00000005112	polr3a	100	95.324	Gambusia_affinis
ENSAPEG00000001966	-	100	95.324	ENSGACG00000002304	polr3a	100	95.324	Gasterosteus_aculeatus
ENSAPEG00000001966	-	95	90.310	ENSGAGG00000010386	POLR3A	98	90.310	Gopherus_agassizii
ENSAPEG00000001966	-	99	89.306	ENSGGOG00000027729	POLR3A	100	91.404	Gorilla_gorilla
ENSAPEG00000001966	-	100	96.403	ENSHBUG00000018098	polr3a	100	96.403	Haplochromis_burtoni
ENSAPEG00000001966	-	100	89.784	ENSHGLG00000017899	POLR3A	100	89.784	Heterocephalus_glaber_female
ENSAPEG00000001966	-	100	89.784	ENSHGLG00100008483	POLR3A	100	89.784	Heterocephalus_glaber_male
ENSAPEG00000001966	-	100	94.748	ENSHCOG00000001075	polr3a	100	94.748	Hippocampus_comes
ENSAPEG00000001966	-	100	90.360	ENSSTOG00000012983	POLR3A	100	90.360	Ictidomys_tridecemlineatus
ENSAPEG00000001966	-	100	95.396	ENSKMAG00000015290	polr3a	100	95.396	Kryptolebias_marmoratus
ENSAPEG00000001966	-	99	94.816	ENSLBEG00000017214	polr3a	99	94.816	Labrus_bergylta
ENSAPEG00000001966	-	97	88.178	ENSLACG00000018557	POLR3A	99	88.178	Latimeria_chalumnae
ENSAPEG00000001966	-	100	92.319	ENSLOCG00000004942	polr3a	100	92.319	Lepisosteus_oculatus
ENSAPEG00000001966	-	100	88.929	ENSLAFG00000016719	POLR3A	100	88.929	Loxodonta_africana
ENSAPEG00000001966	-	100	90.288	ENSMFAG00000032218	POLR3A	100	90.288	Macaca_fascicularis
ENSAPEG00000001966	-	100	90.288	ENSMMUG00000005514	POLR3A	100	90.288	Macaca_mulatta
ENSAPEG00000001966	-	99	86.377	ENSMNEG00000035163	POLR3A	99	90.027	Macaca_nemestrina
ENSAPEG00000001966	-	100	86.691	ENSMLEG00000030014	POLR3A	98	91.772	Mandrillus_leucophaeus
ENSAPEG00000001966	-	100	96.547	ENSMAMG00000017497	polr3a	100	96.547	Mastacembelus_armatus
ENSAPEG00000001966	-	100	96.403	ENSMZEG00005000576	polr3a	100	96.403	Maylandia_zebra
ENSAPEG00000001966	-	100	73.429	ENSMGAG00000005713	-	100	73.429	Meleagris_gallopavo
ENSAPEG00000001966	-	100	88.273	ENSMAUG00000016247	Polr3a	100	88.273	Mesocricetus_auratus
ENSAPEG00000001966	-	100	90.360	ENSMICG00000005937	POLR3A	100	91.486	Microcebus_murinus
ENSAPEG00000001966	-	100	90.360	ENSMOCG00000012185	Polr3a	100	90.360	Microtus_ochrogaster
ENSAPEG00000001966	-	100	95.683	ENSMMOG00000013822	polr3a	100	95.683	Mola_mola
ENSAPEG00000001966	-	100	90.360	ENSMODG00000001036	POLR3A	100	90.360	Monodelphis_domestica
ENSAPEG00000001966	-	100	96.115	ENSMALG00000001249	polr3a	100	96.115	Monopterus_albus
ENSAPEG00000001966	-	100	90.216	MGP_CAROLIEiJ_G0019016	Polr3a	100	90.216	Mus_caroli
ENSAPEG00000001966	-	100	90.288	ENSMUSG00000025280	Polr3a	100	90.288	Mus_musculus
ENSAPEG00000001966	-	100	90.216	MGP_PahariEiJ_G0030029	Polr3a	100	90.216	Mus_pahari
ENSAPEG00000001966	-	100	87.626	MGP_SPRETEiJ_G0019894	Polr3a	97	95.050	Mus_spretus
ENSAPEG00000001966	-	100	89.729	ENSMPUG00000003790	POLR3A	100	89.729	Mustela_putorius_furo
ENSAPEG00000001966	-	100	89.209	ENSMLUG00000011522	POLR3A	100	89.209	Myotis_lucifugus
ENSAPEG00000001966	-	100	88.993	ENSNGAG00000015863	Polr3a	100	88.993	Nannospalax_galili
ENSAPEG00000001966	-	100	94.460	ENSNBRG00000014262	polr3a	100	94.460	Neolamprologus_brichardi
ENSAPEG00000001966	-	88	84.137	ENSNLEG00000010501	POLR3A	92	84.137	Nomascus_leucogenys
ENSAPEG00000001966	-	99	77.818	ENSMEUG00000012446	POLR3A	100	77.818	Notamacropus_eugenii
ENSAPEG00000001966	-	100	85.540	ENSOPRG00000001880	-	100	85.540	Ochotona_princeps
ENSAPEG00000001966	-	100	89.424	ENSODEG00000015146	POLR3A	100	89.424	Octodon_degus
ENSAPEG00000001966	-	100	96.906	ENSONIG00000016129	polr3a	100	96.906	Oreochromis_niloticus
ENSAPEG00000001966	-	98	89.554	ENSOANG00000007013	POLR3A	100	89.554	Ornithorhynchus_anatinus
ENSAPEG00000001966	-	100	90.000	ENSOCUG00000012450	POLR3A	100	90.000	Oryctolagus_cuniculus
ENSAPEG00000001966	-	100	95.899	ENSORLG00000008958	polr3a	100	95.899	Oryzias_latipes
ENSAPEG00000001966	-	100	93.525	ENSORLG00020007525	polr3a	98	96.125	Oryzias_latipes_hni
ENSAPEG00000001966	-	100	95.899	ENSORLG00015006633	polr3a	100	95.899	Oryzias_latipes_hsok
ENSAPEG00000001966	-	100	95.180	ENSOMEG00000012865	polr3a	100	95.180	Oryzias_melastigma
ENSAPEG00000001966	-	100	89.856	ENSOGAG00000010995	POLR3A	100	89.856	Otolemur_garnettii
ENSAPEG00000001966	-	100	90.014	ENSOARG00000009656	POLR3A	100	90.014	Ovis_aries
ENSAPEG00000001966	-	100	90.504	ENSPPRG00000002128	POLR3A	100	90.504	Panthera_pardus
ENSAPEG00000001966	-	100	90.504	ENSPTIG00000020916	POLR3A	100	90.504	Panthera_tigris_altaica
ENSAPEG00000001966	-	100	90.432	ENSPTRG00000002664	POLR3A	100	90.432	Pan_troglodytes
ENSAPEG00000001966	-	100	90.288	ENSPANG00000022508	POLR3A	100	90.288	Papio_anubis
ENSAPEG00000001966	-	100	92.518	ENSPKIG00000008140	polr3a	100	92.619	Paramormyrops_kingsleyae
ENSAPEG00000001966	-	98	90.431	ENSPSIG00000002092	POLR3A	100	90.431	Pelodiscus_sinensis
ENSAPEG00000001966	-	100	90.144	ENSPEMG00000006768	Polr3a	100	90.144	Peromyscus_maniculatus_bairdii
ENSAPEG00000001966	-	100	90.288	ENSPCIG00000015842	POLR3A	100	90.288	Phascolarctos_cinereus
ENSAPEG00000001966	-	54	96.510	ENSPFOG00000006458	polr3a	100	96.510	Poecilia_formosa
ENSAPEG00000001966	-	100	95.755	ENSPLAG00000000997	polr3a	100	95.755	Poecilia_latipinna
ENSAPEG00000001966	-	100	95.683	ENSPMEG00000006821	polr3a	100	95.683	Poecilia_mexicana
ENSAPEG00000001966	-	100	95.612	ENSPREG00000002385	polr3a	100	95.612	Poecilia_reticulata
ENSAPEG00000001966	-	93	90.163	ENSPPYG00000002305	POLR3A	99	90.163	Pongo_abelii
ENSAPEG00000001966	-	84	78.053	ENSPCAG00000005690	POLR3A	87	78.053	Procavia_capensis
ENSAPEG00000001966	-	100	90.216	ENSPCOG00000028311	POLR3A	100	90.216	Propithecus_coquereli
ENSAPEG00000001966	-	100	88.921	ENSPVAG00000015553	POLR3A	100	88.921	Pteropus_vampyrus
ENSAPEG00000001966	-	100	96.475	ENSPNYG00000020987	polr3a	100	96.475	Pundamilia_nyererei
ENSAPEG00000001966	-	99	88.112	ENSPNAG00000006629	polr3a	99	88.112	Pygocentrus_nattereri
ENSAPEG00000001966	-	100	90.144	ENSRNOG00000010008	Polr3a	100	90.144	Rattus_norvegicus
ENSAPEG00000001966	-	100	86.763	ENSRBIG00000034967	POLR3A	98	91.772	Rhinopithecus_bieti
ENSAPEG00000001966	-	100	90.288	ENSRROG00000025527	POLR3A	100	90.288	Rhinopithecus_roxellana
ENSAPEG00000001966	-	97	50.175	YOR116C	RPO31	98	50.175	Saccharomyces_cerevisiae
ENSAPEG00000001966	-	100	90.288	ENSSBOG00000022199	POLR3A	100	90.288	Saimiri_boliviensis_boliviensis
ENSAPEG00000001966	-	100	90.216	ENSSHAG00000007588	POLR3A	94	90.216	Sarcophilus_harrisii
ENSAPEG00000001966	-	100	93.165	ENSSFOG00015014357	polr3a	100	93.165	Scleropages_formosus
ENSAPEG00000001966	-	100	95.755	ENSSMAG00000001780	polr3a	100	95.755	Scophthalmus_maximus
ENSAPEG00000001966	-	100	97.266	ENSSDUG00000019840	polr3a	100	97.266	Seriola_dumerili
ENSAPEG00000001966	-	100	97.338	ENSSLDG00000023908	polr3a	100	97.338	Seriola_lalandi_dorsalis
ENSAPEG00000001966	-	69	89.655	ENSSARG00000009916	POLR3A	89	89.655	Sorex_araneus
ENSAPEG00000001966	-	100	88.273	ENSSPUG00000013209	POLR3A	100	88.273	Sphenodon_punctatus
ENSAPEG00000001966	-	100	98.345	ENSSPAG00000017712	polr3a	100	98.345	Stegastes_partitus
ENSAPEG00000001966	-	100	90.288	ENSSSCG00000010327	POLR3A	100	90.426	Sus_scrofa
ENSAPEG00000001966	-	100	90.576	ENSTGUG00000006423	-	100	90.576	Taeniopygia_guttata
ENSAPEG00000001966	-	100	95.324	ENSTRUG00000013488	polr3a	100	95.324	Takifugu_rubripes
ENSAPEG00000001966	-	100	95.259	ENSTNIG00000013151	polr3a	100	95.259	Tetraodon_nigroviridis
ENSAPEG00000001966	-	71	91.489	ENSTBEG00000015288	POLR3A	75	91.489	Tupaia_belangeri
ENSAPEG00000001966	-	100	83.885	ENSTTRG00000007817	POLR3A	100	83.885	Tursiops_truncatus
ENSAPEG00000001966	-	100	88.058	ENSUAMG00000011283	POLR3A	100	88.058	Ursus_americanus
ENSAPEG00000001966	-	100	90.360	ENSUMAG00000013913	POLR3A	100	90.360	Ursus_maritimus
ENSAPEG00000001966	-	99	88.475	ENSVPAG00000003285	POLR3A	96	88.475	Vicugna_pacos
ENSAPEG00000001966	-	100	90.288	ENSVVUG00000025523	POLR3A	100	90.288	Vulpes_vulpes
ENSAPEG00000001966	-	86	90.393	ENSXETG00000018101	polr3a	100	90.393	Xenopus_tropicalis
ENSAPEG00000001966	-	100	95.612	ENSXMAG00000015213	polr3a	100	95.612	Xiphophorus_maculatus