EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000001977 (Gene tree)
Gene ID: -
Gene Symbol: srp54
Alias: zgc:55842|zgc:85713
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 13299 bases
Position: chr18:17669040-17682338
Accession: ZDB-GENE-040426-818
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000002771	SRP54	PF00448.22	3.6e-77	1	1
ENSAPEP00000002783	SRP54	PF00448.22	4.3e-77	1	1
ENSAPEP00000002783	SRP54_N	PF02881.19	4.6e-20	1	1
ENSAPEP00000002771	SRP54_N	PF02881.19	6.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000002832	-	4264	-	ENSAPEP00000002771	474 (aa)	-	-
ENSAPET00000002846	-	4181	-	ENSAPEP00000002783	504 (aa)	-	UPI0004957468

Gene Model

Click here to download ENSAPEG00000001977's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000001977's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000001977	srp54	100	95.833	ENSG00000100883	SRP54	100	97.674	Homo_sapiens
ENSAPEG00000001977	srp54	100	100.000	ENSAPOG00000011314	srp54	100	100.000	Acanthochromis_polyacanthus
ENSAPEG00000001977	srp54	100	95.833	ENSAMEG00000015544	SRP54	100	95.833	Ailuropoda_melanoleuca
ENSAPEG00000001977	srp54	89	98.218	ENSACIG00000022831	srp54	97	98.218	Amphilophus_citrinellus
ENSAPEG00000001977	srp54	100	100.000	ENSAOCG00000019401	srp54	100	100.000	Amphiprion_ocellaris
ENSAPEG00000001977	srp54	100	99.405	ENSATEG00000013877	srp54	100	99.405	Anabas_testudineus
ENSAPEG00000001977	srp54	94	95.148	ENSAPLG00000010125	SRP54	95	95.148	Anas_platyrhynchos
ENSAPEG00000001977	srp54	100	95.238	ENSACAG00000002103	-	100	95.238	Anolis_carolinensis
ENSAPEG00000001977	srp54	69	79.456	ENSACAG00000001124	-	100	79.456	Anolis_carolinensis
ENSAPEG00000001977	srp54	92	92.166	ENSACAG00000010631	-	100	92.166	Anolis_carolinensis
ENSAPEG00000001977	srp54	100	95.833	ENSANAG00000022133	SRP54	100	95.833	Aotus_nancymaae
ENSAPEG00000001977	srp54	100	99.603	ENSACLG00000015866	srp54	100	99.603	Astatotilapia_calliptera
ENSAPEG00000001977	srp54	100	97.619	ENSAMXG00000032669	SRP54	100	97.619	Astyanax_mexicanus
ENSAPEG00000001977	srp54	100	95.833	ENSBTAG00000019085	SRP54	100	95.833	Bos_taurus
ENSAPEG00000001977	srp54	98	73.932	WBGene00009012	F21D5.7	100	72.892	Caenorhabditis_elegans
ENSAPEG00000001977	srp54	100	95.833	ENSCJAG00000006581	SRP54	100	95.833	Callithrix_jacchus
ENSAPEG00000001977	srp54	100	95.833	ENSCAFG00000013331	SRP54	100	95.833	Canis_familiaris
ENSAPEG00000001977	srp54	100	95.833	ENSCAFG00020023427	SRP54	100	95.833	Canis_lupus_dingo
ENSAPEG00000001977	srp54	100	95.833	ENSCHIG00000026345	SRP54	100	95.833	Capra_hircus
ENSAPEG00000001977	srp54	100	95.635	ENSTSYG00000002680	-	100	95.635	Carlito_syrichta
ENSAPEG00000001977	srp54	94	84.211	ENSTSYG00000035333	-	93	84.211	Carlito_syrichta
ENSAPEG00000001977	srp54	94	61.633	ENSCAPG00000008780	SRP54	100	61.633	Cavia_aperea
ENSAPEG00000001977	srp54	100	95.437	ENSCPOG00000003691	SRP54	100	95.437	Cavia_porcellus
ENSAPEG00000001977	srp54	90	95.238	ENSCCAG00000024179	SRP54	100	95.465	Cebus_capucinus
ENSAPEG00000001977	srp54	100	95.833	ENSCATG00000034083	SRP54	100	95.833	Cercocebus_atys
ENSAPEG00000001977	srp54	100	95.833	ENSCLAG00000015076	SRP54	100	95.833	Chinchilla_lanigera
ENSAPEG00000001977	srp54	100	95.833	ENSCSAG00000015575	SRP54	100	95.833	Chlorocebus_sabaeus
ENSAPEG00000001977	srp54	95	84.823	ENSCHOG00000008986	SRP54	100	84.823	Choloepus_hoffmanni
ENSAPEG00000001977	srp54	100	95.833	ENSCPBG00000026195	SRP54	100	95.833	Chrysemys_picta_bellii
ENSAPEG00000001977	srp54	100	82.738	ENSCING00000007380	-	100	82.738	Ciona_intestinalis
ENSAPEG00000001977	srp54	100	95.833	ENSCANG00000028532	SRP54	100	95.833	Colobus_angolensis_palliatus
ENSAPEG00000001977	srp54	100	95.833	ENSCGRG00001009525	-	100	95.833	Cricetulus_griseus_chok1gshd
ENSAPEG00000001977	srp54	76	96.104	ENSCGRG00000009453	-	89	96.104	Cricetulus_griseus_crigri
ENSAPEG00000001977	srp54	100	99.008	ENSCSEG00000012392	srp54	100	99.008	Cynoglossus_semilaevis
ENSAPEG00000001977	srp54	100	99.603	ENSCVAG00000010395	srp54	100	99.603	Cyprinodon_variegatus
ENSAPEG00000001977	srp54	100	98.413	ENSDARG00000098367	srp54	100	98.413	Danio_rerio
ENSAPEG00000001977	srp54	100	95.833	ENSDNOG00000032525	SRP54	100	95.833	Dasypus_novemcinctus
ENSAPEG00000001977	srp54	89	80.531	ENSDORG00000005159	-	98	80.531	Dipodomys_ordii
ENSAPEG00000001977	srp54	96	78.969	FBgn0010747	Srp54k	98	78.514	Drosophila_melanogaster
ENSAPEG00000001977	srp54	100	95.148	ENSETEG00000016307	-	100	94.643	Echinops_telfairi
ENSAPEG00000001977	srp54	88	55.981	ENSETEG00000012102	-	99	55.981	Echinops_telfairi
ENSAPEG00000001977	srp54	100	88.492	ENSEBUG00000009437	-	100	88.492	Eptatretus_burgeri
ENSAPEG00000001977	srp54	100	95.833	ENSEASG00005002057	SRP54	100	95.833	Equus_asinus_asinus
ENSAPEG00000001977	srp54	99	95.582	ENSECAG00000018042	SRP54	98	95.582	Equus_caballus
ENSAPEG00000001977	srp54	100	80.159	ENSEEUG00000001511	SRP54	100	80.159	Erinaceus_europaeus
ENSAPEG00000001977	srp54	100	98.016	ENSELUG00000003395	srp54	100	98.016	Esox_lucius
ENSAPEG00000001977	srp54	100	95.635	ENSFCAG00000032033	SRP54	100	95.635	Felis_catus
ENSAPEG00000001977	srp54	100	95.437	ENSFALG00000005995	SRP54	100	95.437	Ficedula_albicollis
ENSAPEG00000001977	srp54	100	95.833	ENSFDAG00000016767	SRP54	100	95.833	Fukomys_damarensis
ENSAPEG00000001977	srp54	100	99.603	ENSFHEG00000004263	srp54	100	99.603	Fundulus_heteroclitus
ENSAPEG00000001977	srp54	100	92.616	ENSGMOG00000011391	srp54	100	92.678	Gadus_morhua
ENSAPEG00000001977	srp54	100	95.437	ENSGALG00000023135	SRP54	100	95.437	Gallus_gallus
ENSAPEG00000001977	srp54	100	99.802	ENSGAFG00000011586	srp54	100	99.802	Gambusia_affinis
ENSAPEG00000001977	srp54	100	99.206	ENSGACG00000004181	srp54	100	99.206	Gasterosteus_aculeatus
ENSAPEG00000001977	srp54	100	95.833	ENSGAGG00000014766	SRP54	100	95.833	Gopherus_agassizii
ENSAPEG00000001977	srp54	100	95.833	ENSGGOG00000002926	SRP54	100	95.833	Gorilla_gorilla
ENSAPEG00000001977	srp54	100	99.603	ENSHBUG00000005678	srp54	100	99.603	Haplochromis_burtoni
ENSAPEG00000001977	srp54	100	95.833	ENSHGLG00000002850	SRP54	100	95.833	Heterocephalus_glaber_female
ENSAPEG00000001977	srp54	100	95.833	ENSHGLG00100005263	SRP54	100	95.833	Heterocephalus_glaber_male
ENSAPEG00000001977	srp54	100	66.733	ENSHGLG00100007281	-	100	66.733	Heterocephalus_glaber_male
ENSAPEG00000001977	srp54	100	98.101	ENSHCOG00000021127	srp54	100	97.817	Hippocampus_comes
ENSAPEG00000001977	srp54	100	97.619	ENSIPUG00000001420	srp54	100	97.619	Ictalurus_punctatus
ENSAPEG00000001977	srp54	100	95.833	ENSSTOG00000016023	SRP54	100	95.833	Ictidomys_tridecemlineatus
ENSAPEG00000001977	srp54	93	74.091	ENSJJAG00000016404	-	100	74.091	Jaculus_jaculus
ENSAPEG00000001977	srp54	100	91.071	ENSJJAG00000013417	-	100	91.071	Jaculus_jaculus
ENSAPEG00000001977	srp54	100	99.206	ENSKMAG00000007707	srp54	100	99.206	Kryptolebias_marmoratus
ENSAPEG00000001977	srp54	100	99.802	ENSLBEG00000018690	srp54	100	99.802	Labrus_bergylta
ENSAPEG00000001977	srp54	100	99.802	ENSLBEG00000021122	srp54	100	99.802	Labrus_bergylta
ENSAPEG00000001977	srp54	100	95.833	ENSLACG00000017890	SRP54	100	95.833	Latimeria_chalumnae
ENSAPEG00000001977	srp54	100	98.016	ENSLOCG00000009440	srp54	100	98.016	Lepisosteus_oculatus
ENSAPEG00000001977	srp54	100	95.833	ENSLAFG00000012007	SRP54	100	95.833	Loxodonta_africana
ENSAPEG00000001977	srp54	100	95.833	ENSMFAG00000044371	SRP54	100	95.833	Macaca_fascicularis
ENSAPEG00000001977	srp54	100	95.833	ENSMMUG00000015073	FAM177A1	100	95.833	Macaca_mulatta
ENSAPEG00000001977	srp54	100	95.833	ENSMNEG00000006947	SRP54	100	95.833	Macaca_nemestrina
ENSAPEG00000001977	srp54	100	95.833	ENSMLEG00000042251	SRP54	100	95.833	Mandrillus_leucophaeus
ENSAPEG00000001977	srp54	100	99.603	ENSMAMG00000004803	srp54	100	99.603	Mastacembelus_armatus
ENSAPEG00000001977	srp54	100	99.603	ENSMZEG00005027528	srp54	100	99.603	Maylandia_zebra
ENSAPEG00000001977	srp54	100	90.909	ENSMGAG00000012481	SRP54	100	90.909	Meleagris_gallopavo
ENSAPEG00000001977	srp54	100	96.032	ENSMAUG00000014447	-	100	96.032	Mesocricetus_auratus
ENSAPEG00000001977	srp54	100	95.833	ENSMICG00000010270	SRP54	100	95.833	Microcebus_murinus
ENSAPEG00000001977	srp54	93	95.682	ENSMOCG00000000948	-	100	95.682	Microtus_ochrogaster
ENSAPEG00000001977	srp54	90	97.137	ENSMMOG00000020303	srp54	99	97.137	Mola_mola
ENSAPEG00000001977	srp54	100	95.833	ENSMODG00000012925	-	100	95.833	Monodelphis_domestica
ENSAPEG00000001977	srp54	100	95.833	ENSMODG00000023150	-	100	95.833	Monodelphis_domestica
ENSAPEG00000001977	srp54	88	99.097	ENSMALG00000009163	srp54	98	99.097	Monopterus_albus
ENSAPEG00000001977	srp54	100	96.032	MGP_CAROLIEiJ_G0017754	-	100	96.032	Mus_caroli
ENSAPEG00000001977	srp54	100	96.032	ENSMUSG00000073079	Srp54a	100	97.273	Mus_musculus
ENSAPEG00000001977	srp54	100	96.032	ENSMUSG00000112449	Srp54b	100	96.032	Mus_musculus
ENSAPEG00000001977	srp54	100	95.238	ENSMUSG00000079108	Srp54c	100	95.238	Mus_musculus
ENSAPEG00000001977	srp54	100	96.032	MGP_PahariEiJ_G0029510	-	100	96.032	Mus_pahari
ENSAPEG00000001977	srp54	100	95.833	ENSMPUG00000016302	SRP54	100	95.833	Mustela_putorius_furo
ENSAPEG00000001977	srp54	100	95.238	ENSMLUG00000008958	SRP54	100	95.238	Myotis_lucifugus
ENSAPEG00000001977	srp54	100	86.706	ENSNGAG00000019806	-	100	86.706	Nannospalax_galili
ENSAPEG00000001977	srp54	93	99.545	ENSNBRG00000006000	srp54	100	99.545	Neolamprologus_brichardi
ENSAPEG00000001977	srp54	100	95.833	ENSNLEG00000003496	SRP54	100	95.833	Nomascus_leucogenys
ENSAPEG00000001977	srp54	67	98.214	ENSMEUG00000000138	-	76	98.214	Notamacropus_eugenii
ENSAPEG00000001977	srp54	58	96.721	ENSOPRG00000014502	-	60	96.721	Ochotona_princeps
ENSAPEG00000001977	srp54	100	95.833	ENSODEG00000004865	SRP54	100	95.833	Octodon_degus
ENSAPEG00000001977	srp54	100	99.603	ENSONIG00000011768	srp54	100	99.603	Oreochromis_niloticus
ENSAPEG00000001977	srp54	100	95.833	ENSOANG00000014051	SRP54	100	95.833	Ornithorhynchus_anatinus
ENSAPEG00000001977	srp54	100	95.238	ENSOCUG00000007838	SRP54	100	95.238	Oryctolagus_cuniculus
ENSAPEG00000001977	srp54	100	99.405	ENSORLG00000010027	srp54	100	99.405	Oryzias_latipes
ENSAPEG00000001977	srp54	100	99.405	ENSORLG00020001878	srp54	100	99.405	Oryzias_latipes_hni
ENSAPEG00000001977	srp54	100	99.405	ENSORLG00015021866	srp54	100	99.405	Oryzias_latipes_hsok
ENSAPEG00000001977	srp54	100	99.206	ENSOMEG00000020952	srp54	100	99.206	Oryzias_melastigma
ENSAPEG00000001977	srp54	100	95.833	ENSOGAG00000012188	SRP54	100	95.833	Otolemur_garnettii
ENSAPEG00000001977	srp54	100	95.833	ENSOARG00000007160	SRP54	100	95.833	Ovis_aries
ENSAPEG00000001977	srp54	100	95.833	ENSPPAG00000017434	SRP54	100	95.833	Pan_paniscus
ENSAPEG00000001977	srp54	100	94.841	ENSPPRG00000014047	SRP54	100	94.841	Panthera_pardus
ENSAPEG00000001977	srp54	100	95.635	ENSPTIG00000000744	SRP54	96	95.635	Panthera_tigris_altaica
ENSAPEG00000001977	srp54	100	95.833	ENSPTRG00000006259	FAM177A1	100	95.833	Pan_troglodytes
ENSAPEG00000001977	srp54	100	95.833	ENSPANG00000023853	SRP54	100	95.833	Papio_anubis
ENSAPEG00000001977	srp54	100	97.890	ENSPKIG00000001953	srp54	100	97.817	Paramormyrops_kingsleyae
ENSAPEG00000001977	srp54	100	95.635	ENSPSIG00000006476	SRP54	100	95.635	Pelodiscus_sinensis
ENSAPEG00000001977	srp54	91	96.304	ENSPMGG00000004127	srp54	99	96.304	Periophthalmus_magnuspinnatus
ENSAPEG00000001977	srp54	100	83.929	ENSPEMG00000019634	-	100	83.929	Peromyscus_maniculatus_bairdii
ENSAPEG00000001977	srp54	100	90.278	ENSPMAG00000006078	-	100	90.278	Petromyzon_marinus
ENSAPEG00000001977	srp54	100	95.833	ENSPCIG00000016175	SRP54	100	95.833	Phascolarctos_cinereus
ENSAPEG00000001977	srp54	100	99.802	ENSPFOG00000008870	srp54	100	99.802	Poecilia_formosa
ENSAPEG00000001977	srp54	100	99.802	ENSPLAG00000009889	srp54	100	99.802	Poecilia_latipinna
ENSAPEG00000001977	srp54	100	99.802	ENSPMEG00000008601	srp54	100	99.802	Poecilia_mexicana
ENSAPEG00000001977	srp54	100	99.802	ENSPREG00000004505	srp54	100	99.802	Poecilia_reticulata
ENSAPEG00000001977	srp54	100	90.873	ENSPPYG00000005739	SRP54	100	90.873	Pongo_abelii
ENSAPEG00000001977	srp54	100	92.262	ENSPCAG00000006268	SRP54	100	92.262	Procavia_capensis
ENSAPEG00000001977	srp54	100	93.861	ENSPCOG00000022473	SRP54	100	93.861	Propithecus_coquereli
ENSAPEG00000001977	srp54	63	97.872	ENSPVAG00000010056	SRP54	82	97.872	Pteropus_vampyrus
ENSAPEG00000001977	srp54	100	99.603	ENSPNYG00000009717	srp54	100	99.603	Pundamilia_nyererei
ENSAPEG00000001977	srp54	100	97.817	ENSPNAG00000008544	srp54	100	97.817	Pygocentrus_nattereri
ENSAPEG00000001977	srp54	100	95.833	ENSRNOG00000032776	Srp54a	100	95.833	Rattus_norvegicus
ENSAPEG00000001977	srp54	100	95.833	ENSRROG00000041292	SRP54	100	95.833	Rhinopithecus_roxellana
ENSAPEG00000001977	srp54	86	51.701	YPR088C	SRP54	95	47.318	Saccharomyces_cerevisiae
ENSAPEG00000001977	srp54	100	95.570	ENSSBOG00000035145	SRP54	100	95.570	Saimiri_boliviensis_boliviensis
ENSAPEG00000001977	srp54	72	94.752	ENSSHAG00000000671	SRP54	100	94.752	Sarcophilus_harrisii
ENSAPEG00000001977	srp54	100	98.312	ENSSFOG00015013920	srp54	100	98.214	Scleropages_formosus
ENSAPEG00000001977	srp54	100	93.446	ENSSMAG00000002441	srp54	100	93.446	Scophthalmus_maximus
ENSAPEG00000001977	srp54	100	99.405	ENSSDUG00000018586	srp54	100	99.405	Seriola_dumerili
ENSAPEG00000001977	srp54	100	99.603	ENSSLDG00000010476	srp54	100	99.603	Seriola_lalandi_dorsalis
ENSAPEG00000001977	srp54	100	95.833	ENSSARG00000002744	SRP54	100	95.833	Sorex_araneus
ENSAPEG00000001977	srp54	100	95.833	ENSSPUG00000013101	SRP54	100	95.833	Sphenodon_punctatus
ENSAPEG00000001977	srp54	100	100.000	ENSSPAG00000002354	srp54	100	100.000	Stegastes_partitus
ENSAPEG00000001977	srp54	100	95.833	ENSSSCG00000001955	SRP54	100	95.833	Sus_scrofa
ENSAPEG00000001977	srp54	94	95.148	ENSTGUG00000011945	-	95	95.148	Taeniopygia_guttata
ENSAPEG00000001977	srp54	100	98.810	ENSTRUG00000007057	srp54	100	98.810	Takifugu_rubripes
ENSAPEG00000001977	srp54	100	98.016	ENSTNIG00000002589	srp54	100	98.016	Tetraodon_nigroviridis
ENSAPEG00000001977	srp54	94	87.025	ENSTBEG00000011409	SRP54	100	87.025	Tupaia_belangeri
ENSAPEG00000001977	srp54	100	86.706	ENSTTRG00000000928	SRP54	100	86.706	Tursiops_truncatus
ENSAPEG00000001977	srp54	52	96.565	ENSUAMG00000012385	SRP54	100	96.565	Ursus_americanus
ENSAPEG00000001977	srp54	100	95.833	ENSUMAG00000011234	SRP54	100	95.833	Ursus_maritimus
ENSAPEG00000001977	srp54	94	95.359	ENSVPAG00000005668	SRP54	100	95.359	Vicugna_pacos
ENSAPEG00000001977	srp54	100	95.833	ENSVVUG00000019962	SRP54	100	95.833	Vulpes_vulpes
ENSAPEG00000001977	srp54	100	81.262	ENSXETG00000012290	srp54	100	81.262	Xenopus_tropicalis
ENSAPEG00000001977	srp54	88	99.774	ENSXCOG00000004658	srp54	96	99.774	Xiphophorus_couchianus
ENSAPEG00000001977	srp54	100	99.802	ENSXMAG00000018315	srp54	100	99.802	Xiphophorus_maculatus