EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000002224 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 1427 bases
Position: chr13:17488482-17489908
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000003118	RRM_1	PF00076.22	1.9e-32	1	2
ENSAPEP00000003118	RRM_1	PF00076.22	1.9e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000003191	-	720	-	ENSAPEP00000003118	239 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000002224's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000002224's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000002224	-	71	37.059	ENSAPEG00000017599	hnrnpaba	59	37.059
ENSAPEG00000002224	-	79	38.798	ENSAPEG00000007706	msi2a	53	37.500
ENSAPEG00000002224	-	74	72.671	ENSAPEG00000002274	-	96	72.671
ENSAPEG00000002224	-	65	31.579	ENSAPEG00000015917	slirp	80	31.579
ENSAPEG00000002224	-	82	30.964	ENSAPEG00000018093	tardbpl	55	30.636
ENSAPEG00000002224	-	71	37.647	ENSAPEG00000001689	-	50	37.647
ENSAPEG00000002224	-	86	52.885	ENSAPEG00000004179	-	53	56.000
ENSAPEG00000002224	-	65	31.579	ENSAPEG00000015719	-	81	31.579
ENSAPEG00000002224	-	71	37.647	ENSAPEG00000005603	hnrnpd	52	37.427

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000002224	-	85	99.505	ENSAOCG00000015914	-	72	99.505	Amphiprion_ocellaris
ENSAPEG00000002224	-	74	72.671	ENSAOCG00000015951	-	96	72.671	Amphiprion_ocellaris
ENSAPEG00000002224	-	81	94.301	ENSACLG00000008978	-	89	93.846	Astatotilapia_calliptera
ENSAPEG00000002224	-	82	90.769	ENSCVAG00000008324	-	93	86.977	Cyprinodon_variegatus
ENSAPEG00000002224	-	74	35.762	ENSEBUG00000010003	-	80	35.762	Eptatretus_burgeri
ENSAPEG00000002224	-	74	74.545	ENSELUG00000014407	-	98	74.545	Esox_lucius
ENSAPEG00000002224	-	81	94.301	ENSHBUG00000023867	-	89	93.846	Haplochromis_burtoni
ENSAPEG00000002224	-	75	80.447	ENSHCOG00000007180	-	76	80.447	Hippocampus_comes
ENSAPEG00000002224	-	74	90.964	ENSLBEG00000006362	-	79	90.964	Labrus_bergylta
ENSAPEG00000002224	-	68	73.214	ENSLOCG00000012121	-	65	73.214	Lepisosteus_oculatus
ENSAPEG00000002224	-	81	95.361	ENSMAMG00000017728	-	74	95.385	Mastacembelus_armatus
ENSAPEG00000002224	-	76	93.923	ENSMZEG00005001063	-	81	94.444	Maylandia_zebra
ENSAPEG00000002224	-	74	71.605	ENSMMOG00000004242	-	98	71.605	Mola_mola
ENSAPEG00000002224	-	74	43.017	ENSMEUG00000003051	-	56	43.017	Notamacropus_eugenii
ENSAPEG00000002224	-	82	55.610	ENSORLG00000030284	-	63	56.061	Oryzias_latipes
ENSAPEG00000002224	-	76	60.894	ENSORLG00000023542	-	62	62.069	Oryzias_latipes
ENSAPEG00000002224	-	75	61.236	ENSORLG00000023176	-	59	62.428	Oryzias_latipes
ENSAPEG00000002224	-	74	58.960	ENSORLG00020006029	-	60	58.960	Oryzias_latipes_hni
ENSAPEG00000002224	-	74	90.805	ENSORLG00020007171	-	97	90.805	Oryzias_latipes_hni
ENSAPEG00000002224	-	74	58.788	ENSORLG00020007084	-	77	59.627	Oryzias_latipes_hni
ENSAPEG00000002224	-	82	52.727	ENSOMEG00000002084	-	70	63.415	Oryzias_melastigma
ENSAPEG00000002224	-	85	56.684	ENSOMEG00000023475	-	67	57.222	Oryzias_melastigma
ENSAPEG00000002224	-	74	53.614	ENSOMEG00000009566	-	87	53.614	Oryzias_melastigma
ENSAPEG00000002224	-	84	56.684	ENSOMEG00000006903	-	69	57.222	Oryzias_melastigma
ENSAPEG00000002224	-	87	53.110	ENSOMEG00000002509	-	76	57.222	Oryzias_melastigma
ENSAPEG00000002224	-	78	55.851	ENSOMEG00000021030	-	68	56.667	Oryzias_melastigma
ENSAPEG00000002224	-	85	54.464	ENSOMEG00000012368	-	67	57.222	Oryzias_melastigma
ENSAPEG00000002224	-	74	61.111	ENSOMEG00000002000	-	67	61.111	Oryzias_melastigma
ENSAPEG00000002224	-	72	48.276	ENSOMEG00000006327	-	60	48.276	Oryzias_melastigma
ENSAPEG00000002224	-	82	90.769	ENSPREG00000010603	-	65	90.769	Poecilia_reticulata
ENSAPEG00000002224	-	81	94.301	ENSPNYG00000020763	-	89	93.846	Pundamilia_nyererei
ENSAPEG00000002224	-	73	71.429	ENSPNAG00000018051	-	81	71.429	Pygocentrus_nattereri
ENSAPEG00000002224	-	74	62.147	ENSSHAG00000015609	-	81	62.147	Sarcophilus_harrisii
ENSAPEG00000002224	-	74	98.193	ENSSDUG00000002394	-	87	98.193	Seriola_dumerili
ENSAPEG00000002224	-	73	73.684	ENSSLDG00000024685	-	86	73.684	Seriola_lalandi_dorsalis