EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000002274 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 5558 bases
Position: chr13:17490903-17496460
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000003167	RRM_1	PF00076.22	1.1e-34	1	2
ENSAPEP00000003167	RRM_1	PF00076.22	1.1e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000003240	-	504	-	ENSAPEP00000003167	167 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000002274's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000002274's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000002274	-	95	35.256	ENSAPEG00000017599	hnrnpaba	59	35.256
ENSAPEG00000002274	-	96	72.671	ENSAPEG00000002224	-	74	72.671
ENSAPEG00000002274	-	93	37.419	ENSAPEG00000005603	hnrnpd	52	37.419
ENSAPEG00000002274	-	96	35.714	ENSAPEG00000007706	msi2a	57	35.333
ENSAPEG00000002274	-	89	31.633	ENSAPEG00000018093	tardbpl	52	31.633
ENSAPEG00000002274	-	95	59.748	ENSAPEG00000004179	-	54	59.748

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000002274	-	100	100.000	ENSAOCG00000015951	-	100	100.000	Amphiprion_ocellaris
ENSAPEG00000002274	-	96	72.671	ENSAOCG00000015914	-	63	72.671	Amphiprion_ocellaris
ENSAPEG00000002274	-	96	75.155	ENSACLG00000008978	-	81	75.155	Astatotilapia_calliptera
ENSAPEG00000002274	-	96	73.292	ENSCVAG00000008324	-	76	73.292	Cyprinodon_variegatus
ENSAPEG00000002274	-	92	39.869	ENSEBUG00000010003	-	80	39.869	Eptatretus_burgeri
ENSAPEG00000002274	-	96	81.988	ENSELUG00000014407	-	98	81.988	Esox_lucius
ENSAPEG00000002274	-	96	75.155	ENSHBUG00000023867	-	81	75.155	Haplochromis_burtoni
ENSAPEG00000002274	-	96	67.081	ENSHCOG00000007180	-	75	67.081	Hippocampus_comes
ENSAPEG00000002274	-	96	70.807	ENSLBEG00000006362	-	79	70.807	Labrus_bergylta
ENSAPEG00000002274	-	68	82.301	ENSLOCG00000012121	-	61	82.301	Lepisosteus_oculatus
ENSAPEG00000002274	-	96	73.913	ENSMAMG00000017728	-	67	73.913	Mastacembelus_armatus
ENSAPEG00000002274	-	96	75.155	ENSMZEG00005001063	-	80	75.155	Maylandia_zebra
ENSAPEG00000002274	-	99	92.169	ENSMMOG00000004242	-	100	92.169	Mola_mola
ENSAPEG00000002274	-	95	46.541	ENSMEUG00000003051	-	51	46.541	Notamacropus_eugenii
ENSAPEG00000002274	-	95	73.718	ENSORLG00000023176	-	59	73.718	Oryzias_latipes
ENSAPEG00000002274	-	96	68.944	ENSORLG00000030284	-	63	67.257	Oryzias_latipes
ENSAPEG00000002274	-	95	73.248	ENSORLG00000023542	-	62	73.248	Oryzias_latipes
ENSAPEG00000002274	-	93	74.026	ENSORLG00020006029	-	62	74.026	Oryzias_latipes_hni
ENSAPEG00000002274	-	96	72.671	ENSORLG00020007171	-	96	72.671	Oryzias_latipes_hni
ENSAPEG00000002274	-	98	71.779	ENSORLG00020007084	-	77	71.779	Oryzias_latipes_hni
ENSAPEG00000002274	-	96	65.644	ENSOMEG00000002509	-	88	66.667	Oryzias_melastigma
ENSAPEG00000002274	-	96	64.417	ENSOMEG00000021030	-	72	64.417	Oryzias_melastigma
ENSAPEG00000002274	-	94	69.231	ENSOMEG00000002084	-	70	69.231	Oryzias_melastigma
ENSAPEG00000002274	-	96	66.871	ENSOMEG00000002000	-	69	66.871	Oryzias_melastigma
ENSAPEG00000002274	-	96	64.596	ENSOMEG00000009566	-	84	64.596	Oryzias_melastigma
ENSAPEG00000002274	-	96	66.258	ENSOMEG00000023475	-	69	66.258	Oryzias_melastigma
ENSAPEG00000002274	-	95	68.750	ENSOMEG00000006327	-	73	68.750	Oryzias_melastigma
ENSAPEG00000002274	-	96	65.031	ENSOMEG00000006903	-	77	65.031	Oryzias_melastigma
ENSAPEG00000002274	-	96	65.644	ENSOMEG00000012368	-	69	65.644	Oryzias_melastigma
ENSAPEG00000002274	-	96	73.292	ENSPREG00000010603	-	59	73.292	Poecilia_reticulata
ENSAPEG00000002274	-	96	75.155	ENSPNYG00000020763	-	81	75.155	Pundamilia_nyererei
ENSAPEG00000002274	-	95	79.874	ENSPNAG00000018051	-	80	79.874	Pygocentrus_nattereri
ENSAPEG00000002274	-	94	68.790	ENSSHAG00000015609	-	81	68.790	Sarcophilus_harrisii
ENSAPEG00000002274	-	96	73.913	ENSSDUG00000002394	-	87	73.913	Seriola_dumerili
ENSAPEG00000002274	-	96	97.436	ENSSLDG00000024685	-	88	97.436	Seriola_lalandi_dorsalis