EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000002433 (Gene tree)
Gene ID: -
Gene Symbol: polr1c
Alias: zgc:65973
Full Name: RNA polymerase I and III subunit C
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 12110 bases
Position: chr20:18899535-18911644
Accession: ZDB-GENE-040426-1495
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000003380	RNA_pol_A_bac	PF01000.26	2.5e-31	1	1
ENSAPEP00000003380	RNA_pol_L	PF01193.24	2.3e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000003457	-	1807	-	ENSAPEP00000003380	351 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000002433's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000002433's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000002433	polr1c	100	71.225	ENSG00000171453	POLR1C	100	72.203	Homo_sapiens
ENSAPEG00000002433	polr1c	100	96.581	ENSAPOG00000024356	polr1c	100	96.581	Acanthochromis_polyacanthus
ENSAPEG00000002433	polr1c	99	71.633	ENSAMEG00000012205	POLR1C	99	71.347	Ailuropoda_melanoleuca
ENSAPEG00000002433	polr1c	93	78.354	ENSACIG00000016268	polr1c	90	78.354	Amphilophus_citrinellus
ENSAPEG00000002433	polr1c	100	99.145	ENSAOCG00000011687	polr1c	97	99.145	Amphiprion_ocellaris
ENSAPEG00000002433	polr1c	99	90.544	ENSATEG00000005985	polr1c	99	90.544	Anabas_testudineus
ENSAPEG00000002433	polr1c	83	73.448	ENSAPLG00000002908	POLR1C	100	70.395	Anas_platyrhynchos
ENSAPEG00000002433	polr1c	89	71.246	ENSACAG00000009764	POLR1C	88	70.927	Anolis_carolinensis
ENSAPEG00000002433	polr1c	100	71.225	ENSANAG00000025805	POLR1C	99	70.940	Aotus_nancymaae
ENSAPEG00000002433	polr1c	100	90.028	ENSACLG00000006573	polr1c	100	90.028	Astatotilapia_calliptera
ENSAPEG00000002433	polr1c	100	81.766	ENSAMXG00000012062	polr1c	99	81.197	Astyanax_mexicanus
ENSAPEG00000002433	polr1c	99	71.920	ENSBTAG00000018969	POLR1C	99	71.633	Bos_taurus
ENSAPEG00000002433	polr1c	92	46.746	WBGene00019275	rpac-40	92	46.154	Caenorhabditis_elegans
ENSAPEG00000002433	polr1c	100	70.655	ENSCJAG00000005594	POLR1C	100	70.370	Callithrix_jacchus
ENSAPEG00000002433	polr1c	99	71.347	ENSCAFG00000001872	POLR1C	99	71.060	Canis_familiaris
ENSAPEG00000002433	polr1c	99	71.347	ENSCAFG00020012018	POLR1C	99	71.060	Canis_lupus_dingo
ENSAPEG00000002433	polr1c	99	71.920	ENSCHIG00000004352	POLR1C	99	71.347	Capra_hircus
ENSAPEG00000002433	polr1c	99	71.347	ENSTSYG00000011921	POLR1C	99	71.060	Carlito_syrichta
ENSAPEG00000002433	polr1c	86	72.517	ENSCAPG00000015364	POLR1C	87	72.185	Cavia_aperea
ENSAPEG00000002433	polr1c	100	72.080	ENSCPOG00000038098	POLR1C	100	71.795	Cavia_porcellus
ENSAPEG00000002433	polr1c	99	70.774	ENSCCAG00000020169	POLR1C	99	70.487	Cebus_capucinus
ENSAPEG00000002433	polr1c	100	71.225	ENSCATG00000044045	POLR1C	100	70.940	Cercocebus_atys
ENSAPEG00000002433	polr1c	100	72.080	ENSCLAG00000009266	POLR1C	100	71.795	Chinchilla_lanigera
ENSAPEG00000002433	polr1c	100	70.655	ENSCSAG00000011913	POLR1C	100	70.370	Chlorocebus_sabaeus
ENSAPEG00000002433	polr1c	60	68.396	ENSCHOG00000006601	POLR1C	100	68.396	Choloepus_hoffmanni
ENSAPEG00000002433	polr1c	99	73.066	ENSCPBG00000025203	POLR1C	99	72.779	Chrysemys_picta_bellii
ENSAPEG00000002433	polr1c	99	54.728	ENSCING00000003563	-	99	54.728	Ciona_intestinalis
ENSAPEG00000002433	polr1c	100	71.225	ENSCANG00000043167	POLR1C	100	70.940	Colobus_angolensis_palliatus
ENSAPEG00000002433	polr1c	99	70.774	ENSCGRG00001017533	Polr1c	99	70.201	Cricetulus_griseus_chok1gshd
ENSAPEG00000002433	polr1c	86	71.192	ENSCGRG00000013225	Polr1c	99	70.530	Cricetulus_griseus_crigri
ENSAPEG00000002433	polr1c	100	84.046	ENSCSEG00000018097	polr1c	100	83.476	Cynoglossus_semilaevis
ENSAPEG00000002433	polr1c	60	89.151	ENSCVAG00000005684	polr1c	85	89.151	Cyprinodon_variegatus
ENSAPEG00000002433	polr1c	100	80.342	ENSDARG00000039400	polr1c	96	79.487	Danio_rerio
ENSAPEG00000002433	polr1c	100	71.795	ENSDNOG00000042693	POLR1C	100	71.510	Dasypus_novemcinctus
ENSAPEG00000002433	polr1c	99	71.920	ENSDORG00000000429	Polr1c	99	71.633	Dipodomys_ordii
ENSAPEG00000002433	polr1c	95	51.952	FBgn0031657	CG3756	97	50.751	Drosophila_melanogaster
ENSAPEG00000002433	polr1c	99	68.195	ENSETEG00000010807	POLR1C	99	68.195	Echinops_telfairi
ENSAPEG00000002433	polr1c	98	67.536	ENSEBUG00000013725	polr1c	98	67.246	Eptatretus_burgeri
ENSAPEG00000002433	polr1c	99	71.060	ENSEASG00005003338	POLR1C	99	70.774	Equus_asinus_asinus
ENSAPEG00000002433	polr1c	99	71.060	ENSECAG00000023516	POLR1C	98	70.774	Equus_caballus
ENSAPEG00000002433	polr1c	99	72.206	ENSEEUG00000005471	POLR1C	99	71.920	Erinaceus_europaeus
ENSAPEG00000002433	polr1c	100	80.342	ENSELUG00000013027	polr1c	100	79.772	Esox_lucius
ENSAPEG00000002433	polr1c	99	72.493	ENSFCAG00000009735	POLR1C	99	72.206	Felis_catus
ENSAPEG00000002433	polr1c	93	71.254	ENSFALG00000012111	POLR1C	100	70.948	Ficedula_albicollis
ENSAPEG00000002433	polr1c	99	71.633	ENSFDAG00000008428	POLR1C	99	71.347	Fukomys_damarensis
ENSAPEG00000002433	polr1c	100	73.219	ENSFHEG00000000262	polr1c	100	73.789	Fundulus_heteroclitus
ENSAPEG00000002433	polr1c	93	80.183	ENSGMOG00000013878	polr1c	100	79.878	Gadus_morhua
ENSAPEG00000002433	polr1c	99	71.060	ENSGALG00000010349	POLR1C	99	70.774	Gallus_gallus
ENSAPEG00000002433	polr1c	100	87.464	ENSGAFG00000010153	polr1c	100	87.464	Gambusia_affinis
ENSAPEG00000002433	polr1c	100	85.470	ENSGACG00000002453	polr1c	100	85.470	Gasterosteus_aculeatus
ENSAPEG00000002433	polr1c	98	73.333	ENSGAGG00000010640	POLR1C	99	73.043	Gopherus_agassizii
ENSAPEG00000002433	polr1c	100	71.225	ENSGGOG00000010903	POLR1C	100	70.940	Gorilla_gorilla
ENSAPEG00000002433	polr1c	100	81.197	ENSHBUG00000017816	polr1c	100	80.342	Haplochromis_burtoni
ENSAPEG00000002433	polr1c	99	71.060	ENSHGLG00000019441	POLR1C	100	70.076	Heterocephalus_glaber_female
ENSAPEG00000002433	polr1c	99	71.347	ENSHGLG00100005970	POLR1C	100	70.076	Heterocephalus_glaber_male
ENSAPEG00000002433	polr1c	99	82.421	ENSHCOG00000002179	polr1c	99	82.421	Hippocampus_comes
ENSAPEG00000002433	polr1c	99	80.229	ENSIPUG00000024464	polr1c	99	79.656	Ictalurus_punctatus
ENSAPEG00000002433	polr1c	99	71.633	ENSSTOG00000010631	POLR1C	99	71.347	Ictidomys_tridecemlineatus
ENSAPEG00000002433	polr1c	99	71.633	ENSJJAG00000023110	Polr1c	99	71.347	Jaculus_jaculus
ENSAPEG00000002433	polr1c	100	86.040	ENSKMAG00000014305	polr1c	97	86.040	Kryptolebias_marmoratus
ENSAPEG00000002433	polr1c	100	90.598	ENSLBEG00000014925	polr1c	100	90.598	Labrus_bergylta
ENSAPEG00000002433	polr1c	95	58.036	ENSLACG00000012567	POLR1C	98	57.440	Latimeria_chalumnae
ENSAPEG00000002433	polr1c	100	78.917	ENSLOCG00000016710	polr1c	96	78.348	Lepisosteus_oculatus
ENSAPEG00000002433	polr1c	87	72.131	ENSLAFG00000026248	POLR1C	100	72.131	Loxodonta_africana
ENSAPEG00000002433	polr1c	100	70.940	ENSMFAG00000046295	POLR1C	100	70.655	Macaca_fascicularis
ENSAPEG00000002433	polr1c	100	70.940	ENSMMUG00000015192	POLR1C	100	70.655	Macaca_mulatta
ENSAPEG00000002433	polr1c	100	70.940	ENSMNEG00000028073	POLR1C	100	70.655	Macaca_nemestrina
ENSAPEG00000002433	polr1c	100	70.940	ENSMLEG00000034818	POLR1C	100	70.655	Mandrillus_leucophaeus
ENSAPEG00000002433	polr1c	100	89.744	ENSMAMG00000008700	polr1c	100	89.744	Mastacembelus_armatus
ENSAPEG00000002433	polr1c	100	89.744	ENSMZEG00005018545	polr1c	100	89.744	Maylandia_zebra
ENSAPEG00000002433	polr1c	84	68.136	ENSMGAG00000011020	POLR1C	100	67.797	Meleagris_gallopavo
ENSAPEG00000002433	polr1c	99	71.060	ENSMAUG00000014329	Polr1c	99	70.774	Mesocricetus_auratus
ENSAPEG00000002433	polr1c	99	69.628	ENSMICG00000005027	POLR1C	99	69.775	Microcebus_murinus
ENSAPEG00000002433	polr1c	99	71.347	ENSMOCG00000017549	Polr1c	99	71.060	Microtus_ochrogaster
ENSAPEG00000002433	polr1c	99	72.000	ENSMMOG00000005380	polr1c	99	72.571	Mola_mola
ENSAPEG00000002433	polr1c	84	74.576	ENSMODG00000018964	POLR1C	100	74.237	Monodelphis_domestica
ENSAPEG00000002433	polr1c	100	74.359	ENSMALG00000011711	polr1c	100	74.644	Monopterus_albus
ENSAPEG00000002433	polr1c	99	63.897	MGP_CAROLIEiJ_G0021662	Polr1c	100	70.455	Mus_caroli
ENSAPEG00000002433	polr1c	99	71.920	ENSMUSG00000067148	Polr1c	98	73.267	Mus_musculus
ENSAPEG00000002433	polr1c	99	72.493	MGP_PahariEiJ_G0020654	Polr1c	100	71.970	Mus_pahari
ENSAPEG00000002433	polr1c	99	71.920	MGP_SPRETEiJ_G0022574	Polr1c	98	73.267	Mus_spretus
ENSAPEG00000002433	polr1c	99	71.920	ENSMPUG00000012916	POLR1C	91	71.633	Mustela_putorius_furo
ENSAPEG00000002433	polr1c	99	71.347	ENSMLUG00000017751	POLR1C	99	71.060	Myotis_lucifugus
ENSAPEG00000002433	polr1c	99	71.347	ENSNGAG00000023487	Polr1c	100	72.881	Nannospalax_galili
ENSAPEG00000002433	polr1c	100	90.028	ENSNBRG00000018742	polr1c	100	90.028	Neolamprologus_brichardi
ENSAPEG00000002433	polr1c	100	70.940	ENSNLEG00000004035	POLR1C	100	70.655	Nomascus_leucogenys
ENSAPEG00000002433	polr1c	100	62.393	ENSMEUG00000006778	POLR1C	100	62.108	Notamacropus_eugenii
ENSAPEG00000002433	polr1c	77	70.111	ENSOPRG00000000145	POLR1C	99	69.742	Ochotona_princeps
ENSAPEG00000002433	polr1c	100	71.795	ENSODEG00000015831	-	100	71.510	Octodon_degus
ENSAPEG00000002433	polr1c	62	68.950	ENSODEG00000017109	-	97	69.340	Octodon_degus
ENSAPEG00000002433	polr1c	100	90.598	ENSONIG00000013133	polr1c	98	90.598	Oreochromis_niloticus
ENSAPEG00000002433	polr1c	99	69.628	ENSOANG00000003043	POLR1C	99	69.341	Ornithorhynchus_anatinus
ENSAPEG00000002433	polr1c	99	70.201	ENSOCUG00000005504	POLR1C	99	69.914	Oryctolagus_cuniculus
ENSAPEG00000002433	polr1c	99	83.621	ENSORLG00000019743	polr1c	99	83.621	Oryzias_latipes
ENSAPEG00000002433	polr1c	99	84.483	ENSORLG00020006489	POLR1C	99	84.483	Oryzias_latipes_hni
ENSAPEG00000002433	polr1c	76	66.058	ENSORLG00020005555	polr1c	81	65.580	Oryzias_latipes_hni
ENSAPEG00000002433	polr1c	99	83.621	ENSORLG00015013322	polr1c	99	83.621	Oryzias_latipes_hsok
ENSAPEG00000002433	polr1c	98	85.797	ENSOMEG00000016527	polr1c	98	85.797	Oryzias_melastigma
ENSAPEG00000002433	polr1c	99	70.774	ENSOGAG00000016318	POLR1C	99	70.201	Otolemur_garnettii
ENSAPEG00000002433	polr1c	99	71.633	ENSOARG00000007503	POLR1C	99	71.347	Ovis_aries
ENSAPEG00000002433	polr1c	100	71.225	ENSPPAG00000043678	POLR1C	100	70.940	Pan_paniscus
ENSAPEG00000002433	polr1c	99	72.493	ENSPPRG00000009760	POLR1C	99	72.206	Panthera_pardus
ENSAPEG00000002433	polr1c	99	72.493	ENSPTIG00000014813	POLR1C	99	72.206	Panthera_tigris_altaica
ENSAPEG00000002433	polr1c	100	71.225	ENSPTRG00000018202	POLR1C	100	70.940	Pan_troglodytes
ENSAPEG00000002433	polr1c	100	71.225	ENSPANG00000009025	POLR1C	99	70.940	Papio_anubis
ENSAPEG00000002433	polr1c	100	80.627	ENSPKIG00000009858	polr1c	100	80.057	Paramormyrops_kingsleyae
ENSAPEG00000002433	polr1c	99	72.493	ENSPSIG00000012580	POLR1C	94	72.493	Pelodiscus_sinensis
ENSAPEG00000002433	polr1c	100	71.795	ENSPMGG00000012121	polr1c	100	72.080	Periophthalmus_magnuspinnatus
ENSAPEG00000002433	polr1c	99	71.633	ENSPEMG00000006970	Polr1c	99	71.060	Peromyscus_maniculatus_bairdii
ENSAPEG00000002433	polr1c	100	69.492	ENSPMAG00000005560	polr1c	100	68.927	Petromyzon_marinus
ENSAPEG00000002433	polr1c	62	30.804	ENSPMAG00000004827	polr2c	91	30.804	Petromyzon_marinus
ENSAPEG00000002433	polr1c	100	73.504	ENSPCIG00000028137	POLR1C	98	73.219	Phascolarctos_cinereus
ENSAPEG00000002433	polr1c	100	87.464	ENSPFOG00000014357	polr1c	98	87.464	Poecilia_formosa
ENSAPEG00000002433	polr1c	100	87.464	ENSPFOG00000014342	POLR1C	100	87.464	Poecilia_formosa
ENSAPEG00000002433	polr1c	60	88.208	ENSPLAG00000004111	polr1c	88	88.208	Poecilia_latipinna
ENSAPEG00000002433	polr1c	100	87.464	ENSPMEG00000011877	-	100	87.464	Poecilia_mexicana
ENSAPEG00000002433	polr1c	100	87.464	ENSPMEG00000008420	polr1c	100	87.464	Poecilia_mexicana
ENSAPEG00000002433	polr1c	100	86.325	ENSPREG00000007985	polr1c	100	86.325	Poecilia_reticulata
ENSAPEG00000002433	polr1c	100	70.940	ENSPPYG00000016645	POLR1C	100	70.655	Pongo_abelii
ENSAPEG00000002433	polr1c	99	69.628	ENSPCOG00000024628	POLR1C	99	69.341	Propithecus_coquereli
ENSAPEG00000002433	polr1c	99	66.189	ENSPVAG00000005689	POLR1C	99	66.189	Pteropus_vampyrus
ENSAPEG00000002433	polr1c	100	89.744	ENSPNYG00000003620	polr1c	100	89.744	Pundamilia_nyererei
ENSAPEG00000002433	polr1c	100	81.481	ENSPNAG00000008443	polr1c	100	80.912	Pygocentrus_nattereri
ENSAPEG00000002433	polr1c	99	71.633	ENSRNOG00000019079	Polr1c	99	71.060	Rattus_norvegicus
ENSAPEG00000002433	polr1c	100	71.225	ENSRBIG00000007155	POLR1C	100	70.940	Rhinopithecus_bieti
ENSAPEG00000002433	polr1c	100	71.225	ENSRROG00000000257	POLR1C	100	70.940	Rhinopithecus_roxellana
ENSAPEG00000002433	polr1c	52	32.804	YIL021W	RPB3	52	32.804	Saccharomyces_cerevisiae
ENSAPEG00000002433	polr1c	92	48.137	YPR110C	RPC40	95	48.137	Saccharomyces_cerevisiae
ENSAPEG00000002433	polr1c	99	70.774	ENSSBOG00000025735	POLR1C	99	70.645	Saimiri_boliviensis_boliviensis
ENSAPEG00000002433	polr1c	100	66.382	ENSSHAG00000014456	POLR1C	100	66.097	Sarcophilus_harrisii
ENSAPEG00000002433	polr1c	100	81.481	ENSSFOG00015019860	polr1c	100	80.912	Scleropages_formosus
ENSAPEG00000002433	polr1c	100	88.319	ENSSMAG00000018865	polr1c	100	87.179	Scophthalmus_maximus
ENSAPEG00000002433	polr1c	100	91.168	ENSSDUG00000015745	polr1c	91	91.168	Seriola_dumerili
ENSAPEG00000002433	polr1c	100	90.598	ENSSLDG00000018285	polr1c	91	90.598	Seriola_lalandi_dorsalis
ENSAPEG00000002433	polr1c	99	71.098	ENSSPUG00000011822	POLR1C	99	70.725	Sphenodon_punctatus
ENSAPEG00000002433	polr1c	100	94.872	ENSSPAG00000022369	polr1c	100	94.872	Stegastes_partitus
ENSAPEG00000002433	polr1c	99	70.774	ENSSSCG00000028007	POLR1C	98	70.487	Sus_scrofa
ENSAPEG00000002433	polr1c	96	71.726	ENSTGUG00000009159	POLR1C	99	71.429	Taeniopygia_guttata
ENSAPEG00000002433	polr1c	99	85.143	ENSTRUG00000006264	polr1c	99	85.143	Takifugu_rubripes
ENSAPEG00000002433	polr1c	51	71.348	ENSTBEG00000002254	POLR1C	100	71.348	Tupaia_belangeri
ENSAPEG00000002433	polr1c	76	70.037	ENSTTRG00000006344	POLR1C	76	69.663	Tursiops_truncatus
ENSAPEG00000002433	polr1c	99	71.920	ENSUAMG00000025602	POLR1C	99	71.633	Ursus_americanus
ENSAPEG00000002433	polr1c	99	71.920	ENSUMAG00000005938	POLR1C	99	71.633	Ursus_maritimus
ENSAPEG00000002433	polr1c	99	69.054	ENSVVUG00000028922	POLR1C	99	68.768	Vulpes_vulpes
ENSAPEG00000002433	polr1c	99	68.571	ENSXETG00000010882	polr1c	99	68.000	Xenopus_tropicalis
ENSAPEG00000002433	polr1c	100	86.325	ENSXCOG00000014185	polr1c	100	85.470	Xiphophorus_couchianus
ENSAPEG00000002433	polr1c	100	86.895	ENSXMAG00000015076	polr1c	100	86.895	Xiphophorus_maculatus