EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000002645 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-117n7.8
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 56425 bases
Position: chr20:3627643-3684067
Accession: 25521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000003807	S1	PF00575.23	2.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000003900	-	2892	-	ENSAPEP00000003807	963 (aa)	-	-
ENSAPET00000003928	-	2310	-	ENSAPEP00000003830	769 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000002645's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000002645's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000002645	si:ch211-117n7.8	87	57.851	ENSG00000068784	SRBD1	83	57.851	Homo_sapiens
ENSAPEG00000002645	si:ch211-117n7.8	100	93.667	ENSAPOG00000005103	si:ch211-117n7.8	97	93.667	Acanthochromis_polyacanthus
ENSAPEG00000002645	si:ch211-117n7.8	88	57.944	ENSAMEG00000005993	SRBD1	85	57.944	Ailuropoda_melanoleuca
ENSAPEG00000002645	si:ch211-117n7.8	99	80.808	ENSACIG00000009875	si:ch211-117n7.8	100	80.707	Amphilophus_citrinellus
ENSAPEG00000002645	si:ch211-117n7.8	100	97.231	ENSAOCG00000024718	si:ch211-117n7.8	97	97.231	Amphiprion_ocellaris
ENSAPEG00000002645	si:ch211-117n7.8	100	77.744	ENSATEG00000010844	si:ch211-117n7.8	97	77.744	Anabas_testudineus
ENSAPEG00000002645	si:ch211-117n7.8	98	54.120	ENSAPLG00000006313	SRBD1	97	53.661	Anas_platyrhynchos
ENSAPEG00000002645	si:ch211-117n7.8	99	52.342	ENSANAG00000025573	SRBD1	97	52.284	Aotus_nancymaae
ENSAPEG00000002645	si:ch211-117n7.8	100	82.229	ENSACLG00000024219	si:ch211-117n7.8	97	82.229	Astatotilapia_calliptera
ENSAPEG00000002645	si:ch211-117n7.8	94	68.484	ENSAMXG00000004294	SRBD1	94	67.610	Astyanax_mexicanus
ENSAPEG00000002645	si:ch211-117n7.8	87	58.844	ENSBTAG00000007508	SRBD1	81	58.844	Bos_taurus
ENSAPEG00000002645	si:ch211-117n7.8	99	52.755	ENSCJAG00000000727	SRBD1	97	52.696	Callithrix_jacchus
ENSAPEG00000002645	si:ch211-117n7.8	99	53.231	ENSCAFG00000002554	SRBD1	96	53.231	Canis_familiaris
ENSAPEG00000002645	si:ch211-117n7.8	99	50.513	ENSCAFG00020026284	SRBD1	97	58.284	Canis_lupus_dingo
ENSAPEG00000002645	si:ch211-117n7.8	87	58.844	ENSCHIG00000016535	SRBD1	82	58.844	Capra_hircus
ENSAPEG00000002645	si:ch211-117n7.8	97	54.517	ENSTSYG00000012797	SRBD1	96	54.517	Carlito_syrichta
ENSAPEG00000002645	si:ch211-117n7.8	99	53.767	ENSCPOG00000004773	SRBD1	96	53.767	Cavia_porcellus
ENSAPEG00000002645	si:ch211-117n7.8	99	52.138	ENSCCAG00000025589	SRBD1	97	52.081	Cebus_capucinus
ENSAPEG00000002645	si:ch211-117n7.8	87	58.205	ENSCATG00000039530	SRBD1	84	58.205	Cercocebus_atys
ENSAPEG00000002645	si:ch211-117n7.8	88	58.274	ENSCLAG00000008623	SRBD1	85	58.274	Chinchilla_lanigera
ENSAPEG00000002645	si:ch211-117n7.8	99	52.899	ENSCSAG00000013350	SRBD1	97	52.786	Chlorocebus_sabaeus
ENSAPEG00000002645	si:ch211-117n7.8	84	64.000	ENSCHOG00000003805	SRBD1	82	64.000	Choloepus_hoffmanni
ENSAPEG00000002645	si:ch211-117n7.8	98	54.611	ENSCPBG00000005677	SRBD1	97	54.750	Chrysemys_picta_bellii
ENSAPEG00000002645	si:ch211-117n7.8	82	39.900	ENSCING00000005950	-	99	39.900	Ciona_intestinalis
ENSAPEG00000002645	si:ch211-117n7.8	82	42.371	ENSCSAVG00000000861	-	99	42.371	Ciona_savignyi
ENSAPEG00000002645	si:ch211-117n7.8	86	58.076	ENSCANG00000016307	SRBD1	83	58.076	Colobus_angolensis_palliatus
ENSAPEG00000002645	si:ch211-117n7.8	87	57.720	ENSCGRG00001000513	Srbd1	84	57.720	Cricetulus_griseus_chok1gshd
ENSAPEG00000002645	si:ch211-117n7.8	87	57.720	ENSCGRG00000002283	Srbd1	84	57.720	Cricetulus_griseus_crigri
ENSAPEG00000002645	si:ch211-117n7.8	99	74.233	ENSCSEG00000000856	si:ch211-117n7.8	97	74.335	Cynoglossus_semilaevis
ENSAPEG00000002645	si:ch211-117n7.8	99	76.230	ENSCVAG00000020212	si:ch211-117n7.8	98	76.639	Cyprinodon_variegatus
ENSAPEG00000002645	si:ch211-117n7.8	88	56.512	ENSDNOG00000018686	SRBD1	84	56.512	Dasypus_novemcinctus
ENSAPEG00000002645	si:ch211-117n7.8	99	53.354	ENSDORG00000010468	Srbd1	97	53.354	Dipodomys_ordii
ENSAPEG00000002645	si:ch211-117n7.8	82	34.969	FBgn0051156	CG31156	79	35.176	Drosophila_melanogaster
ENSAPEG00000002645	si:ch211-117n7.8	82	57.377	ENSETEG00000000739	SRBD1	82	57.559	Echinops_telfairi
ENSAPEG00000002645	si:ch211-117n7.8	75	48.764	ENSEBUG00000008902	si:ch211-117n7.8	96	48.764	Eptatretus_burgeri
ENSAPEG00000002645	si:ch211-117n7.8	97	52.352	ENSEASG00005003132	SRBD1	98	56.296	Equus_asinus_asinus
ENSAPEG00000002645	si:ch211-117n7.8	97	54.090	ENSECAG00000013865	SRBD1	94	54.090	Equus_caballus
ENSAPEG00000002645	si:ch211-117n7.8	97	69.792	ENSELUG00000012592	si:ch211-117n7.8	94	69.538	Esox_lucius
ENSAPEG00000002645	si:ch211-117n7.8	86	58.432	ENSFCAG00000005101	SRBD1	83	58.432	Felis_catus
ENSAPEG00000002645	si:ch211-117n7.8	98	54.219	ENSFALG00000012966	SRBD1	98	54.115	Ficedula_albicollis
ENSAPEG00000002645	si:ch211-117n7.8	96	53.733	ENSFDAG00000016670	SRBD1	97	53.733	Fukomys_damarensis
ENSAPEG00000002645	si:ch211-117n7.8	99	78.665	ENSFHEG00000019480	si:ch211-117n7.8	97	78.665	Fundulus_heteroclitus
ENSAPEG00000002645	si:ch211-117n7.8	52	70.726	ENSGMOG00000018010	-	100	70.726	Gadus_morhua
ENSAPEG00000002645	si:ch211-117n7.8	98	54.742	ENSGALG00000009990	SRBD1	97	54.268	Gallus_gallus
ENSAPEG00000002645	si:ch211-117n7.8	99	79.363	ENSGAFG00000019664	si:ch211-117n7.8	97	79.363	Gambusia_affinis
ENSAPEG00000002645	si:ch211-117n7.8	65	81.435	ENSGACG00000010794	si:ch211-117n7.8	100	81.435	Gasterosteus_aculeatus
ENSAPEG00000002645	si:ch211-117n7.8	87	59.459	ENSGAGG00000006166	SRBD1	99	59.459	Gopherus_agassizii
ENSAPEG00000002645	si:ch211-117n7.8	99	52.434	ENSGGOG00000005910	SRBD1	99	52.434	Gorilla_gorilla
ENSAPEG00000002645	si:ch211-117n7.8	99	69.725	ENSHBUG00000013207	si:ch211-117n7.8	100	69.725	Haplochromis_burtoni
ENSAPEG00000002645	si:ch211-117n7.8	96	53.597	ENSHGLG00000018153	-	96	53.597	Heterocephalus_glaber_female
ENSAPEG00000002645	si:ch211-117n7.8	96	53.742	ENSHGLG00100015183	-	96	53.742	Heterocephalus_glaber_male
ENSAPEG00000002645	si:ch211-117n7.8	99	65.933	ENSIPUG00000009661	srbd1	95	66.807	Ictalurus_punctatus
ENSAPEG00000002645	si:ch211-117n7.8	99	53.498	ENSSTOG00000005898	SRBD1	97	53.498	Ictidomys_tridecemlineatus
ENSAPEG00000002645	si:ch211-117n7.8	99	51.081	ENSJJAG00000022244	Srbd1	97	51.081	Jaculus_jaculus
ENSAPEG00000002645	si:ch211-117n7.8	100	80.754	ENSKMAG00000003473	si:ch211-117n7.8	97	80.754	Kryptolebias_marmoratus
ENSAPEG00000002645	si:ch211-117n7.8	100	79.032	ENSLBEG00000027518	si:ch211-117n7.8	97	79.032	Labrus_bergylta
ENSAPEG00000002645	si:ch211-117n7.8	87	58.137	ENSLACG00000009790	SRBD1	98	58.137	Latimeria_chalumnae
ENSAPEG00000002645	si:ch211-117n7.8	97	63.992	ENSLOCG00000016360	si:ch211-117n7.8	97	63.115	Lepisosteus_oculatus
ENSAPEG00000002645	si:ch211-117n7.8	87	57.969	ENSMFAG00000042026	SRBD1	84	57.969	Macaca_fascicularis
ENSAPEG00000002645	si:ch211-117n7.8	99	52.798	ENSMMUG00000003490	SRBD1	97	52.685	Macaca_mulatta
ENSAPEG00000002645	si:ch211-117n7.8	87	56.434	ENSMNEG00000034701	SRBD1	83	56.434	Macaca_nemestrina
ENSAPEG00000002645	si:ch211-117n7.8	97	53.285	ENSMLEG00000000745	SRBD1	96	53.285	Mandrillus_leucophaeus
ENSAPEG00000002645	si:ch211-117n7.8	99	79.265	ENSMAMG00000021921	si:ch211-117n7.8	97	79.959	Mastacembelus_armatus
ENSAPEG00000002645	si:ch211-117n7.8	100	82.329	ENSMZEG00005027369	si:ch211-117n7.8	97	82.329	Maylandia_zebra
ENSAPEG00000002645	si:ch211-117n7.8	83	56.613	ENSMGAG00000010273	SRBD1	99	56.613	Meleagris_gallopavo
ENSAPEG00000002645	si:ch211-117n7.8	81	57.266	ENSMAUG00000013916	Srbd1	95	57.266	Mesocricetus_auratus
ENSAPEG00000002645	si:ch211-117n7.8	99	53.299	ENSMICG00000007835	SRBD1	96	53.299	Microcebus_murinus
ENSAPEG00000002645	si:ch211-117n7.8	99	52.294	ENSMOCG00000018716	Srbd1	97	52.294	Microtus_ochrogaster
ENSAPEG00000002645	si:ch211-117n7.8	99	77.254	ENSMMOG00000007507	si:ch211-117n7.8	100	77.254	Mola_mola
ENSAPEG00000002645	si:ch211-117n7.8	100	78.457	ENSMALG00000001562	si:ch211-117n7.8	97	78.557	Monopterus_albus
ENSAPEG00000002645	si:ch211-117n7.8	88	57.143	MGP_CAROLIEiJ_G0021934	Srbd1	99	58.553	Mus_caroli
ENSAPEG00000002645	si:ch211-117n7.8	88	56.789	ENSMUSG00000024135	Srbd1	100	53.873	Mus_musculus
ENSAPEG00000002645	si:ch211-117n7.8	87	57.194	MGP_PahariEiJ_G0020924	Srbd1	84	57.194	Mus_pahari
ENSAPEG00000002645	si:ch211-117n7.8	88	57.025	MGP_SPRETEiJ_G0022850	Srbd1	85	57.025	Mus_spretus
ENSAPEG00000002645	si:ch211-117n7.8	87	57.665	ENSMLUG00000007039	SRBD1	84	57.665	Myotis_lucifugus
ENSAPEG00000002645	si:ch211-117n7.8	97	52.371	ENSNGAG00000011893	Srbd1	96	52.371	Nannospalax_galili
ENSAPEG00000002645	si:ch211-117n7.8	100	79.412	ENSNBRG00000012873	si:ch211-117n7.8	99	79.412	Neolamprologus_brichardi
ENSAPEG00000002645	si:ch211-117n7.8	87	57.497	ENSNLEG00000016877	SRBD1	83	57.497	Nomascus_leucogenys
ENSAPEG00000002645	si:ch211-117n7.8	97	53.397	ENSODEG00000012095	SRBD1	95	53.397	Octodon_degus
ENSAPEG00000002645	si:ch211-117n7.8	100	82.430	ENSONIG00000000945	si:ch211-117n7.8	100	85.059	Oreochromis_niloticus
ENSAPEG00000002645	si:ch211-117n7.8	97	54.021	ENSOCUG00000015385	SRBD1	96	54.330	Oryctolagus_cuniculus
ENSAPEG00000002645	si:ch211-117n7.8	100	73.212	ENSORLG00000004427	si:ch211-117n7.8	97	73.212	Oryzias_latipes
ENSAPEG00000002645	si:ch211-117n7.8	100	76.559	ENSORLG00020012792	si:ch211-117n7.8	97	76.660	Oryzias_latipes_hni
ENSAPEG00000002645	si:ch211-117n7.8	100	76.435	ENSORLG00015018598	si:ch211-117n7.8	97	76.435	Oryzias_latipes_hsok
ENSAPEG00000002645	si:ch211-117n7.8	100	75.076	ENSOMEG00000012229	si:ch211-117n7.8	97	80.000	Oryzias_melastigma
ENSAPEG00000002645	si:ch211-117n7.8	96	51.187	ENSOGAG00000001076	SRBD1	96	51.290	Otolemur_garnettii
ENSAPEG00000002645	si:ch211-117n7.8	87	54.700	ENSOARG00000005958	SRBD1	84	54.700	Ovis_aries
ENSAPEG00000002645	si:ch211-117n7.8	87	57.733	ENSPPAG00000038442	SRBD1	83	57.733	Pan_paniscus
ENSAPEG00000002645	si:ch211-117n7.8	86	58.314	ENSPPRG00000003449	SRBD1	83	58.314	Panthera_pardus
ENSAPEG00000002645	si:ch211-117n7.8	86	58.314	ENSPTIG00000012495	SRBD1	83	58.314	Panthera_tigris_altaica
ENSAPEG00000002645	si:ch211-117n7.8	87	57.733	ENSPTRG00000011889	SRBD1	83	57.733	Pan_troglodytes
ENSAPEG00000002645	si:ch211-117n7.8	87	57.969	ENSPANG00000008063	SRBD1	84	57.969	Papio_anubis
ENSAPEG00000002645	si:ch211-117n7.8	98	64.361	ENSPKIG00000021973	si:ch211-117n7.8	97	63.843	Paramormyrops_kingsleyae
ENSAPEG00000002645	si:ch211-117n7.8	95	54.963	ENSPSIG00000008992	SRBD1	97	53.885	Pelodiscus_sinensis
ENSAPEG00000002645	si:ch211-117n7.8	99	73.695	ENSPMGG00000013348	si:ch211-117n7.8	99	73.695	Periophthalmus_magnuspinnatus
ENSAPEG00000002645	si:ch211-117n7.8	99	51.400	ENSPEMG00000020684	Srbd1	97	51.400	Peromyscus_maniculatus_bairdii
ENSAPEG00000002645	si:ch211-117n7.8	99	79.226	ENSPFOG00000010650	si:ch211-117n7.8	97	79.226	Poecilia_formosa
ENSAPEG00000002645	si:ch211-117n7.8	99	79.162	ENSPLAG00000002141	si:ch211-117n7.8	97	79.162	Poecilia_latipinna
ENSAPEG00000002645	si:ch211-117n7.8	99	79.328	ENSPMEG00000018537	si:ch211-117n7.8	97	79.328	Poecilia_mexicana
ENSAPEG00000002645	si:ch211-117n7.8	99	77.143	ENSPREG00000003258	si:ch211-117n7.8	97	77.143	Poecilia_reticulata
ENSAPEG00000002645	si:ch211-117n7.8	87	53.634	ENSPPYG00000012444	SRBD1	83	53.524	Pongo_abelii
ENSAPEG00000002645	si:ch211-117n7.8	79	51.579	ENSPCAG00000005629	SRBD1	80	51.579	Procavia_capensis
ENSAPEG00000002645	si:ch211-117n7.8	99	44.456	ENSPCOG00000017669	SRBD1	97	44.378	Propithecus_coquereli
ENSAPEG00000002645	si:ch211-117n7.8	99	46.904	ENSPVAG00000001782	SRBD1	96	46.904	Pteropus_vampyrus
ENSAPEG00000002645	si:ch211-117n7.8	99	76.962	ENSPNYG00000000508	si:ch211-117n7.8	100	76.962	Pundamilia_nyererei
ENSAPEG00000002645	si:ch211-117n7.8	98	67.576	ENSPNAG00000013492	SRBD1	97	66.873	Pygocentrus_nattereri
ENSAPEG00000002645	si:ch211-117n7.8	88	56.808	ENSRNOG00000014720	Srbd1	85	56.925	Rattus_norvegicus
ENSAPEG00000002645	si:ch211-117n7.8	86	58.076	ENSRBIG00000033486	SRBD1	83	58.076	Rhinopithecus_bieti
ENSAPEG00000002645	si:ch211-117n7.8	86	58.076	ENSRROG00000041599	SRBD1	83	58.076	Rhinopithecus_roxellana
ENSAPEG00000002645	si:ch211-117n7.8	99	52.642	ENSSBOG00000024982	SRBD1	97	52.530	Saimiri_boliviensis_boliviensis
ENSAPEG00000002645	si:ch211-117n7.8	99	61.811	ENSSFOG00015001128	si:ch211-117n7.8	99	61.811	Scleropages_formosus
ENSAPEG00000002645	si:ch211-117n7.8	100	79.559	ENSSMAG00000018256	si:ch211-117n7.8	98	79.559	Scophthalmus_maximus
ENSAPEG00000002645	si:ch211-117n7.8	97	82.335	ENSSLDG00000023189	si:ch211-117n7.8	100	80.534	Seriola_lalandi_dorsalis
ENSAPEG00000002645	si:ch211-117n7.8	97	50.315	ENSSARG00000009740	SRBD1	95	50.315	Sorex_araneus
ENSAPEG00000002645	si:ch211-117n7.8	88	58.796	ENSSPUG00000010475	SRBD1	99	55.285	Sphenodon_punctatus
ENSAPEG00000002645	si:ch211-117n7.8	99	53.115	ENSSSCG00000008445	SRBD1	95	53.115	Sus_scrofa
ENSAPEG00000002645	si:ch211-117n7.8	87	57.665	ENSTGUG00000003878	SRBD1	100	57.665	Taeniopygia_guttata
ENSAPEG00000002645	si:ch211-117n7.8	99	73.974	ENSTRUG00000007080	si:ch211-117n7.8	97	79.932	Takifugu_rubripes
ENSAPEG00000002645	si:ch211-117n7.8	99	72.592	ENSTNIG00000007464	si:ch211-117n7.8	97	72.592	Tetraodon_nigroviridis
ENSAPEG00000002645	si:ch211-117n7.8	69	80.851	ENSTBEG00000004556	SRBD1	66	80.851	Tupaia_belangeri
ENSAPEG00000002645	si:ch211-117n7.8	91	59.259	ENSTTRG00000011871	SRBD1	88	59.259	Tursiops_truncatus
ENSAPEG00000002645	si:ch211-117n7.8	88	58.226	ENSUAMG00000008126	SRBD1	97	56.679	Ursus_americanus
ENSAPEG00000002645	si:ch211-117n7.8	88	58.226	ENSUMAG00000012902	SRBD1	83	58.226	Ursus_maritimus
ENSAPEG00000002645	si:ch211-117n7.8	88	57.643	ENSVPAG00000006825	SRBD1	92	57.643	Vicugna_pacos
ENSAPEG00000002645	si:ch211-117n7.8	99	53.135	ENSVVUG00000005389	SRBD1	97	53.135	Vulpes_vulpes
ENSAPEG00000002645	si:ch211-117n7.8	99	46.078	ENSXETG00000002760	srbd1	96	46.387	Xenopus_tropicalis
ENSAPEG00000002645	si:ch211-117n7.8	99	78.942	ENSXMAG00000016861	si:ch211-117n7.8	97	78.942	Xiphophorus_maculatus