EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000002769 (Gene tree)
Gene ID: -
Gene Symbol: ncl
Alias: fa12d03|wu:fa12d03|zgc:152810
Full Name: nucleolin
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 10415 bases
Position: chr2:17657779-17668193
Accession: ZDB-GENE-030131-6986
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000003821	RRM_1	PF00076.22	3.1e-60	1	4
ENSAPEP00000003821	RRM_1	PF00076.22	3.1e-60	2	4
ENSAPEP00000003821	RRM_1	PF00076.22	3.1e-60	3	4
ENSAPEP00000003821	RRM_1	PF00076.22	3.1e-60	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000003919	-	4989	-	ENSAPEP00000003821	711 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000002769's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000002769's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000002769	ncl	56	40.670	ENSAPEG00000013612	-	60	41.688

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000002769	ncl	100	97.626	ENSAPOG00000023888	ncl	100	97.626	Acanthochromis_polyacanthus
ENSAPEG00000002769	ncl	58	40.698	ENSAPOG00000014534	-	67	41.432	Acanthochromis_polyacanthus
ENSAPEG00000002769	ncl	69	82.086	ENSACIG00000013234	ncl	62	81.867	Amphilophus_citrinellus
ENSAPEG00000002769	ncl	100	99.017	ENSAOCG00000003133	ncl	100	99.017	Amphiprion_ocellaris
ENSAPEG00000002769	ncl	78	39.675	ENSAOCG00000014792	-	61	41.432	Amphiprion_ocellaris
ENSAPEG00000002769	ncl	68	42.633	ENSATEG00000019862	-	80	46.154	Anabas_testudineus
ENSAPEG00000002769	ncl	65	88.147	ENSATEG00000013343	ncl	60	88.836	Anabas_testudineus
ENSAPEG00000002769	ncl	54	56.489	ENSAPLG00000012897	-	63	59.416	Anas_platyrhynchos
ENSAPEG00000002769	ncl	52	63.021	ENSACAG00000001006	-	52	62.924	Anolis_carolinensis
ENSAPEG00000002769	ncl	57	69.512	ENSAMXG00000001647	ncl	81	73.579	Astyanax_mexicanus
ENSAPEG00000002769	ncl	54	45.584	ENSCHIG00000012665	-	53	45.407	Capra_hircus
ENSAPEG00000002769	ncl	89	51.142	ENSCPBG00000016444	-	56	62.368	Chrysemys_picta_bellii
ENSAPEG00000002769	ncl	55	84.814	ENSCSEG00000015089	ncl	57	85.488	Cynoglossus_semilaevis
ENSAPEG00000002769	ncl	52	84.677	ENSCVAG00000012600	ncl	61	82.660	Cyprinodon_variegatus
ENSAPEG00000002769	ncl	59	75.236	ENSDARG00000002710	ncl	83	77.994	Danio_rerio
ENSAPEG00000002769	ncl	55	48.346	ENSDNOG00000040257	-	61	49.180	Dasypus_novemcinctus
ENSAPEG00000002769	ncl	75	45.137	ENSDNOG00000031611	-	67	46.154	Dasypus_novemcinctus
ENSAPEG00000002769	ncl	67	47.129	ENSEBUG00000016173	ncl	50	48.731	Eptatretus_burgeri
ENSAPEG00000002769	ncl	59	74.588	ENSELUG00000006033	ncl	63	74.118	Esox_lucius
ENSAPEG00000002769	ncl	65	48.283	ENSELUG00000022826	-	80	52.815	Esox_lucius
ENSAPEG00000002769	ncl	53	80.000	ENSFHEG00000018000	ncl	72	80.048	Fundulus_heteroclitus
ENSAPEG00000002769	ncl	67	69.554	ENSGMOG00000001341	ncl	59	69.251	Gadus_morhua
ENSAPEG00000002769	ncl	52	60.053	ENSGALG00000032930	NCL	55	60.053	Gallus_gallus
ENSAPEG00000002769	ncl	89	68.296	ENSGAFG00000015375	ncl	57	81.948	Gambusia_affinis
ENSAPEG00000002769	ncl	89	72.188	ENSGACG00000008970	ncl	66	78.147	Gasterosteus_aculeatus
ENSAPEG00000002769	ncl	89	50.920	ENSGAGG00000013330	-	56	62.533	Gopherus_agassizii
ENSAPEG00000002769	ncl	52	83.065	ENSHBUG00000006869	ncl	60	81.754	Haplochromis_burtoni
ENSAPEG00000002769	ncl	68	80.924	ENSHCOG00000010234	ncl	60	83.411	Hippocampus_comes
ENSAPEG00000002769	ncl	52	75.817	ENSIPUG00000024556	ncl	81	76.144	Ictalurus_punctatus
ENSAPEG00000002769	ncl	59	83.848	ENSKMAG00000008111	ncl	59	82.898	Kryptolebias_marmoratus
ENSAPEG00000002769	ncl	64	41.489	ENSLBEG00000007915	-	66	43.990	Labrus_bergylta
ENSAPEG00000002769	ncl	51	43.158	ENSLBEG00000014278	-	82	43.443	Labrus_bergylta
ENSAPEG00000002769	ncl	59	88.361	ENSLBEG00000019073	ncl	62	87.886	Labrus_bergylta
ENSAPEG00000002769	ncl	59	62.295	ENSLACG00000009328	ncl	62	61.737	Latimeria_chalumnae
ENSAPEG00000002769	ncl	67	52.591	ENSLACG00000022167	-	79	52.941	Latimeria_chalumnae
ENSAPEG00000002769	ncl	50	71.788	ENSLOCG00000004828	ncl	59	68.458	Lepisosteus_oculatus
ENSAPEG00000002769	ncl	60	39.821	ENSMAMG00000003479	-	69	41.451	Mastacembelus_armatus
ENSAPEG00000002769	ncl	89	82.334	ENSMAMG00000002086	ncl	51	90.499	Mastacembelus_armatus
ENSAPEG00000002769	ncl	59	81.710	ENSMZEG00005017438	ncl	60	81.710	Maylandia_zebra
ENSAPEG00000002769	ncl	52	59.239	ENSMGAG00000008147	-	88	59.239	Meleagris_gallopavo
ENSAPEG00000002769	ncl	53	87.059	ENSMMOG00000008553	ncl	84	90.196	Mola_mola
ENSAPEG00000002769	ncl	93	78.896	ENSMALG00000014827	ncl	62	86.398	Monopterus_albus
ENSAPEG00000002769	ncl	52	59.788	ENSMEUG00000012335	-	54	59.894	Notamacropus_eugenii
ENSAPEG00000002769	ncl	53	39.578	ENSONIG00000010631	-	97	39.733	Oreochromis_niloticus
ENSAPEG00000002769	ncl	59	81.235	ENSONIG00000012508	ncl	59	81.235	Oreochromis_niloticus
ENSAPEG00000002769	ncl	52	61.658	ENSOANG00000008732	-	61	62.176	Ornithorhynchus_anatinus
ENSAPEG00000002769	ncl	54	38.035	ENSORLG00000004645	-	83	39.164	Oryzias_latipes
ENSAPEG00000002769	ncl	50	87.989	ENSORLG00000007055	ncl	64	75.745	Oryzias_latipes
ENSAPEG00000002769	ncl	62	36.184	ENSORLG00020003497	-	74	39.164	Oryzias_latipes_hni
ENSAPEG00000002769	ncl	54	38.750	ENSORLG00015006613	-	77	39.164	Oryzias_latipes_hsok
ENSAPEG00000002769	ncl	59	80.760	ENSORLG00015013815	ncl	87	86.275	Oryzias_latipes_hsok
ENSAPEG00000002769	ncl	55	39.851	ENSOMEG00000015864	-	82	40.209	Oryzias_melastigma
ENSAPEG00000002769	ncl	59	83.848	ENSOMEG00000020786	ncl	66	83.848	Oryzias_melastigma
ENSAPEG00000002769	ncl	59	78.538	ENSPKIG00000002604	ncl	53	81.016	Paramormyrops_kingsleyae
ENSAPEG00000002769	ncl	65	57.260	ENSPSIG00000002361	-	54	61.458	Pelodiscus_sinensis
ENSAPEG00000002769	ncl	59	80.569	ENSPMGG00000004709	ncl	84	82.736	Periophthalmus_magnuspinnatus
ENSAPEG00000002769	ncl	52	59.008	ENSPCIG00000003293	-	53	58.961	Phascolarctos_cinereus
ENSAPEG00000002769	ncl	59	81.710	ENSPNYG00000020494	ncl	60	81.710	Pundamilia_nyererei
ENSAPEG00000002769	ncl	59	71.801	ENSPNAG00000006192	ncl	58	71.934	Pygocentrus_nattereri
ENSAPEG00000002769	ncl	57	51.683	ENSSHAG00000002702	-	59	54.450	Sarcophilus_harrisii
ENSAPEG00000002769	ncl	63	74.058	ENSSFOG00015008583	ncl	58	81.016	Scleropages_formosus
ENSAPEG00000002769	ncl	64	40.239	ENSSMAG00000007582	-	61	45.669	Scophthalmus_maximus
ENSAPEG00000002769	ncl	59	85.849	ENSSMAG00000021241	ncl	60	85.849	Scophthalmus_maximus
ENSAPEG00000002769	ncl	65	40.377	ENSSDUG00000010922	-	70	43.636	Seriola_dumerili
ENSAPEG00000002769	ncl	77	83.734	ENSSDUG00000006128	ncl	88	93.067	Seriola_dumerili
ENSAPEG00000002769	ncl	69	87.910	ENSSLDG00000002012	ncl	60	90.499	Seriola_lalandi_dorsalis
ENSAPEG00000002769	ncl	57	43.210	ENSSLDG00000015784	-	83	43.603	Seriola_lalandi_dorsalis
ENSAPEG00000002769	ncl	52	60.560	ENSSPUG00000008244	-	56	60.459	Sphenodon_punctatus
ENSAPEG00000002769	ncl	57	42.892	ENSSPAG00000001859	-	61	43.005	Stegastes_partitus
ENSAPEG00000002769	ncl	77	58.568	ENSTGUG00000009782	-	60	60.209	Taeniopygia_guttata
ENSAPEG00000002769	ncl	52	62.234	ENSXETG00000009517	ncl	54	63.032	Xenopus_tropicalis
ENSAPEG00000002769	ncl	54	66.133	ENSXCOG00000003524	ncl	88	66.400	Xiphophorus_couchianus
ENSAPEG00000002769	ncl	53	40.979	ENSXCOG00000007369	-	89	41.316	Xiphophorus_couchianus
ENSAPEG00000002769	ncl	65	81.034	ENSXMAG00000005914	ncl	58	84.123	Xiphophorus_maculatus