EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000002937 (Gene tree)
Gene ID: -
Gene Symbol: lrpprc
Alias: fc13c04|im:7150924|im:7151572|wu:fc13c04|wu:fj38h02
Full Name: leucine-rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 78142 bases
Position: chr20:4101830-4179971
Accession: ZDB-GENE-030131-7887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000004420	PPR	PF01535.20	3.2e-33	1	6
ENSAPEP00000004420	PPR	PF01535.20	3.2e-33	2	6
ENSAPEP00000004420	PPR	PF01535.20	3.2e-33	3	6
ENSAPEP00000004420	PPR	PF01535.20	3.2e-33	4	6
ENSAPEP00000004420	PPR	PF01535.20	3.2e-33	5	6
ENSAPEP00000004420	PPR	PF01535.20	3.2e-33	6	6
ENSAPEP00000004453	PPR	PF01535.20	3.4e-23	1	3
ENSAPEP00000004453	PPR	PF01535.20	3.4e-23	2	3
ENSAPEP00000004453	PPR	PF01535.20	3.4e-23	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000004539	-	4137	-	ENSAPEP00000004420	1378 (aa)	-	-
ENSAPET00000004571	-	3726	-	ENSAPEP00000004453	1241 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000002937's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000002937's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000002937	lrpprc	98	85.126	ENSAPOG00000016610	lrpprc	100	85.056	Acanthochromis_polyacanthus
ENSAPEG00000002937	lrpprc	95	49.385	ENSAMEG00000005852	LRPPRC	99	49.240	Ailuropoda_melanoleuca
ENSAPEG00000002937	lrpprc	99	72.881	ENSACIG00000009604	lrpprc	99	72.881	Amphilophus_citrinellus
ENSAPEG00000002937	lrpprc	98	92.598	ENSAOCG00000005886	lrpprc	100	92.598	Amphiprion_ocellaris
ENSAPEG00000002937	lrpprc	100	65.721	ENSATEG00000010555	lrpprc	95	74.720	Anabas_testudineus
ENSAPEG00000002937	lrpprc	93	53.506	ENSACAG00000029278	LRPPRC	99	52.214	Anolis_carolinensis
ENSAPEG00000002937	lrpprc	98	49.013	ENSANAG00000027440	LRPPRC	97	56.981	Aotus_nancymaae
ENSAPEG00000002937	lrpprc	98	71.708	ENSACLG00000023712	lrpprc	92	84.314	Astatotilapia_calliptera
ENSAPEG00000002937	lrpprc	98	48.837	ENSCJAG00000000794	LRPPRC	97	56.874	Callithrix_jacchus
ENSAPEG00000002937	lrpprc	96	49.856	ENSCHIG00000020173	LRPPRC	99	50.331	Capra_hircus
ENSAPEG00000002937	lrpprc	94	44.588	ENSCAPG00000013631	LRPPRC	97	44.588	Cavia_aperea
ENSAPEG00000002937	lrpprc	85	52.022	ENSCPOG00000000204	LRPPRC	99	52.022	Cavia_porcellus
ENSAPEG00000002937	lrpprc	98	49.119	ENSCCAG00000031900	LRPPRC	97	57.170	Cebus_capucinus
ENSAPEG00000002937	lrpprc	94	49.743	ENSCATG00000014187	LRPPRC	97	56.415	Cercocebus_atys
ENSAPEG00000002937	lrpprc	99	56.088	ENSCLAG00000005203	LRPPRC	95	56.088	Chinchilla_lanigera
ENSAPEG00000002937	lrpprc	94	50.037	ENSCSAG00000013233	LRPPRC	99	49.224	Chlorocebus_sabaeus
ENSAPEG00000002937	lrpprc	85	56.238	ENSCHOG00000003631	LRPPRC	79	56.238	Choloepus_hoffmanni
ENSAPEG00000002937	lrpprc	96	49.048	ENSCANG00000034961	LRPPRC	99	60.727	Colobus_angolensis_palliatus
ENSAPEG00000002937	lrpprc	98	47.599	ENSCGRG00001016261	Lrpprc	99	47.710	Cricetulus_griseus_chok1gshd
ENSAPEG00000002937	lrpprc	98	47.599	ENSCGRG00000004072	Lrpprc	99	47.710	Cricetulus_griseus_crigri
ENSAPEG00000002937	lrpprc	99	50.282	ENSCSEG00000003850	lrpprc	96	61.523	Cynoglossus_semilaevis
ENSAPEG00000002937	lrpprc	98	74.056	ENSCVAG00000012967	lrpprc	100	74.056	Cyprinodon_variegatus
ENSAPEG00000002937	lrpprc	99	55.272	ENSDARG00000043970	lrpprc	99	55.272	Danio_rerio
ENSAPEG00000002937	lrpprc	81	39.095	ENSDNOG00000032336	-	95	42.477	Dasypus_novemcinctus
ENSAPEG00000002937	lrpprc	98	48.908	ENSDNOG00000012594	-	99	49.331	Dasypus_novemcinctus
ENSAPEG00000002937	lrpprc	97	48.671	ENSDORG00000012233	Lrpprc	99	49.612	Dipodomys_ordii
ENSAPEG00000002937	lrpprc	99	47.829	ENSETEG00000006657	LRPPRC	99	48.911	Echinops_telfairi
ENSAPEG00000002937	lrpprc	85	54.505	ENSEEUG00000012340	LRPPRC	81	56.691	Erinaceus_europaeus
ENSAPEG00000002937	lrpprc	92	64.271	ENSELUG00000012803	lrpprc	95	64.271	Esox_lucius
ENSAPEG00000002937	lrpprc	98	49.718	ENSFCAG00000013468	LRPPRC	99	50.070	Felis_catus
ENSAPEG00000002937	lrpprc	92	47.173	ENSFALG00000012738	LRPPRC	99	47.024	Ficedula_albicollis
ENSAPEG00000002937	lrpprc	98	46.606	ENSFDAG00000015328	LRPPRC	99	46.536	Fukomys_damarensis
ENSAPEG00000002937	lrpprc	98	72.327	ENSFHEG00000019604	lrpprc	100	72.296	Fundulus_heteroclitus
ENSAPEG00000002937	lrpprc	98	62.447	ENSGMOG00000008337	lrpprc	99	62.447	Gadus_morhua
ENSAPEG00000002937	lrpprc	98	71.640	ENSGAFG00000001455	lrpprc	99	71.640	Gambusia_affinis
ENSAPEG00000002937	lrpprc	98	68.803	ENSGACG00000010679	lrpprc	99	69.265	Gasterosteus_aculeatus
ENSAPEG00000002937	lrpprc	99	76.699	ENSHBUG00000000393	lrpprc	98	76.699	Haplochromis_burtoni
ENSAPEG00000002937	lrpprc	98	46.811	ENSHGLG00000006123	LRPPRC	99	46.910	Heterocephalus_glaber_female
ENSAPEG00000002937	lrpprc	60	45.006	ENSHGLG00100005960	-	99	45.006	Heterocephalus_glaber_male
ENSAPEG00000002937	lrpprc	97	68.611	ENSHCOG00000002107	lrpprc	100	68.611	Hippocampus_comes
ENSAPEG00000002937	lrpprc	98	59.749	ENSIPUG00000009406	lrpprc	99	59.610	Ictalurus_punctatus
ENSAPEG00000002937	lrpprc	98	48.419	ENSSTOG00000011185	LRPPRC	99	48.736	Ictidomys_tridecemlineatus
ENSAPEG00000002937	lrpprc	99	47.034	ENSJJAG00000020475	Lrpprc	99	48.059	Jaculus_jaculus
ENSAPEG00000002937	lrpprc	97	61.834	ENSKMAG00000003287	lrpprc	85	61.834	Kryptolebias_marmoratus
ENSAPEG00000002937	lrpprc	98	63.585	ENSLBEG00000023225	lrpprc	96	73.633	Labrus_bergylta
ENSAPEG00000002937	lrpprc	98	55.288	ENSLACG00000014030	LRPPRC	100	55.082	Latimeria_chalumnae
ENSAPEG00000002937	lrpprc	98	58.742	ENSLOCG00000016390	lrpprc	98	58.742	Lepisosteus_oculatus
ENSAPEG00000002937	lrpprc	98	47.398	ENSLAFG00000008614	LRPPRC	99	47.509	Loxodonta_africana
ENSAPEG00000002937	lrpprc	94	50.037	ENSMFAG00000041560	LRPPRC	99	76.382	Macaca_fascicularis
ENSAPEG00000002937	lrpprc	94	49.339	ENSMMUG00000019841	LRPPRC	99	55.449	Macaca_mulatta
ENSAPEG00000002937	lrpprc	97	48.539	ENSMNEG00000031613	LRPPRC	97	56.604	Macaca_nemestrina
ENSAPEG00000002937	lrpprc	96	77.419	ENSMAMG00000021835	lrpprc	92	77.419	Mastacembelus_armatus
ENSAPEG00000002937	lrpprc	99	76.768	ENSMZEG00005027379	lrpprc	99	76.768	Maylandia_zebra
ENSAPEG00000002937	lrpprc	97	58.526	ENSMAUG00000012118	Lrpprc	97	55.916	Mesocricetus_auratus
ENSAPEG00000002937	lrpprc	98	49.225	ENSMICG00000010486	LRPPRC	97	56.415	Microcebus_murinus
ENSAPEG00000002937	lrpprc	99	52.857	ENSMOCG00000006048	Lrpprc	98	52.857	Microtus_ochrogaster
ENSAPEG00000002937	lrpprc	100	69.082	ENSMMOG00000007830	lrpprc	94	78.020	Mola_mola
ENSAPEG00000002937	lrpprc	93	49.815	ENSMODG00000000648	LRPPRC	99	49.815	Monodelphis_domestica
ENSAPEG00000002937	lrpprc	99	66.806	ENSMALG00000001271	lrpprc	99	66.806	Monopterus_albus
ENSAPEG00000002937	lrpprc	97	58.149	ENSMPUG00000011800	LRPPRC	98	55.741	Mustela_putorius_furo
ENSAPEG00000002937	lrpprc	97	48.710	ENSMLUG00000010575	LRPPRC	99	49.119	Myotis_lucifugus
ENSAPEG00000002937	lrpprc	99	55.969	ENSNGAG00000013069	Lrpprc	96	55.969	Nannospalax_galili
ENSAPEG00000002937	lrpprc	95	75.731	ENSNBRG00000013202	lrpprc	100	75.731	Neolamprologus_brichardi
ENSAPEG00000002937	lrpprc	98	48.166	ENSNLEG00000016782	LRPPRC	96	56.415	Nomascus_leucogenys
ENSAPEG00000002937	lrpprc	82	60.444	ENSOPRG00000016774	LRPPRC	84	60.444	Ochotona_princeps
ENSAPEG00000002937	lrpprc	94	48.404	ENSODEG00000011211	LRPPRC	99	47.887	Octodon_degus
ENSAPEG00000002937	lrpprc	99	76.768	ENSONIG00000000917	lrpprc	100	75.651	Oreochromis_niloticus
ENSAPEG00000002937	lrpprc	70	45.632	ENSOANG00000014670	-	99	45.241	Ornithorhynchus_anatinus
ENSAPEG00000002937	lrpprc	98	49.371	ENSOCUG00000015046	LRPPRC	96	49.580	Oryctolagus_cuniculus
ENSAPEG00000002937	lrpprc	99	70.945	ENSORLG00000004605	lrpprc	99	69.102	Oryzias_latipes
ENSAPEG00000002937	lrpprc	90	70.517	ENSORLG00020012536	lrpprc	99	70.024	Oryzias_latipes_hni
ENSAPEG00000002937	lrpprc	100	69.939	ENSORLG00015018270	lrpprc	95	76.721	Oryzias_latipes_hsok
ENSAPEG00000002937	lrpprc	99	47.523	ENSOGAG00000012798	LRPPRC	99	49.010	Otolemur_garnettii
ENSAPEG00000002937	lrpprc	97	48.784	ENSOARG00000006522	LRPPRC	99	49.298	Ovis_aries
ENSAPEG00000002937	lrpprc	99	47.452	ENSPPAG00000040876	LRPPRC	97	56.497	Pan_paniscus
ENSAPEG00000002937	lrpprc	98	50.000	ENSPPRG00000006578	LRPPRC	99	50.000	Panthera_pardus
ENSAPEG00000002937	lrpprc	97	49.300	ENSPTIG00000000933	LRPPRC	97	50.697	Panthera_tigris_altaica
ENSAPEG00000002937	lrpprc	98	48.731	ENSPTRG00000011880	LRPPRC	97	56.530	Pan_troglodytes
ENSAPEG00000002937	lrpprc	94	49.816	ENSPANG00000020731	LRPPRC	97	56.038	Papio_anubis
ENSAPEG00000002937	lrpprc	91	57.751	ENSPKIG00000022232	lrpprc	98	59.369	Paramormyrops_kingsleyae
ENSAPEG00000002937	lrpprc	59	52.714	ENSPSIG00000006830	-	97	49.279	Pelodiscus_sinensis
ENSAPEG00000002937	lrpprc	65	66.296	ENSPMGG00000016597	lrpprc	97	66.296	Periophthalmus_magnuspinnatus
ENSAPEG00000002937	lrpprc	94	42.378	ENSPMAG00000002147	lrpprc	99	44.520	Petromyzon_marinus
ENSAPEG00000002937	lrpprc	98	70.634	ENSPFOG00000011227	lrpprc	99	70.634	Poecilia_formosa
ENSAPEG00000002937	lrpprc	98	70.704	ENSPLAG00000004018	lrpprc	99	70.704	Poecilia_latipinna
ENSAPEG00000002937	lrpprc	98	70.423	ENSPMEG00000016425	lrpprc	99	70.423	Poecilia_mexicana
ENSAPEG00000002937	lrpprc	98	70.501	ENSPREG00000003662	lrpprc	99	70.501	Poecilia_reticulata
ENSAPEG00000002937	lrpprc	57	46.173	ENSPPYG00000029532	-	99	45.926	Pongo_abelii
ENSAPEG00000002937	lrpprc	84	57.884	ENSPCAG00000001430	LRPPRC	81	55.172	Procavia_capensis
ENSAPEG00000002937	lrpprc	97	60.000	ENSPVAG00000002007	LRPPRC	95	57.341	Pteropus_vampyrus
ENSAPEG00000002937	lrpprc	100	70.870	ENSPNYG00000000756	lrpprc	90	83.592	Pundamilia_nyererei
ENSAPEG00000002937	lrpprc	99	68.173	ENSPNAG00000002895	lrpprc	98	68.173	Pygocentrus_nattereri
ENSAPEG00000002937	lrpprc	94	58.597	ENSRNOG00000005877	Lrpprc	97	54.127	Rattus_norvegicus
ENSAPEG00000002937	lrpprc	94	48.064	ENSRBIG00000031552	LRPPRC	99	47.265	Rhinopithecus_bieti
ENSAPEG00000002937	lrpprc	98	49.190	ENSSBOG00000011807	LRPPRC	97	57.170	Saimiri_boliviensis_boliviensis
ENSAPEG00000002937	lrpprc	93	49.073	ENSSHAG00000018725	LRPPRC	99	49.073	Sarcophilus_harrisii
ENSAPEG00000002937	lrpprc	98	54.022	ENSSFOG00015001042	lrpprc	99	54.022	Scleropages_formosus
ENSAPEG00000002937	lrpprc	100	74.359	ENSSDUG00000019062	lrpprc	95	74.359	Seriola_dumerili
ENSAPEG00000002937	lrpprc	100	62.741	ENSSLDG00000023028	lrpprc	100	65.347	Seriola_lalandi_dorsalis
ENSAPEG00000002937	lrpprc	83	63.852	ENSSARG00000000426	LRPPRC	90	63.852	Sorex_araneus
ENSAPEG00000002937	lrpprc	100	74.951	ENSSPAG00000000162	lrpprc	97	74.951	Stegastes_partitus
ENSAPEG00000002937	lrpprc	98	48.768	ENSSSCG00000008452	LRPPRC	99	48.557	Sus_scrofa
ENSAPEG00000002937	lrpprc	94	43.215	ENSTGUG00000003759	LRPPRC	99	45.256	Taeniopygia_guttata
ENSAPEG00000002937	lrpprc	99	66.718	ENSTRUG00000008409	lrpprc	97	66.718	Takifugu_rubripes
ENSAPEG00000002937	lrpprc	98	66.384	ENSTNIG00000007470	lrpprc	100	66.384	Tetraodon_nigroviridis
ENSAPEG00000002937	lrpprc	99	52.281	ENSTTRG00000006403	LRPPRC	97	52.896	Tursiops_truncatus
ENSAPEG00000002937	lrpprc	88	64.116	ENSVPAG00000008993	LRPPRC	90	62.531	Vicugna_pacos
ENSAPEG00000002937	lrpprc	99	63.975	ENSXETG00000009296	lrpprc	99	54.435	Xenopus_tropicalis
ENSAPEG00000002937	lrpprc	97	69.508	ENSXCOG00000013343	lrpprc	96	70.816	Xiphophorus_couchianus
ENSAPEG00000002937	lrpprc	98	71.086	ENSXMAG00000018108	lrpprc	99	71.086	Xiphophorus_maculatus